iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108762

Ensembl Protein ID

EFJ36285

UniProt Accession

D8QUF4; D8QUF4_SELML

Genbank Protein ID

EFJ36285.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377567

Gene Name

SELMODRAFT_78691

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_78691	EFJ36285	EFJ36285

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-27	93.9	555	592
UBD/Beta-Prp	4.40e-64	217.2	94	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHtd++t++ f  d + l+s++ D t++vWD+   ++l
   Q: 555  GHTDRITDFTFsEDgKWLLSSAMDATVRVWDVVAAKQL 592
           8**********955699**************9877765 PP

UBD/Beta-Prp

   S: 14   tcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheae...........vtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           +++k+  +++ +++++ + g + vwd+        ls +e++           vt++   +++    + g eD+ +++w+++++k+vh +kg ++ vl++ 
   Q: 94   SKIKYlLEFGHFILSSDTEGHVCVWDTGI------LSTKEDGkpiaelhlgrgVTCLMHPQTYLdKVLFGFEDGRLQLWNIKSRKMVHEFKGWNSPVLTCV 188
           23333344566666666666666666655......33333335556666666699997666653599********************************** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
           +sp  d++ +G  d  i+v +++ ++ + ++   ++g v+ +++  dg   l++G+  +++ +Wdl+ +kl +    +h++ v sl f  n + l+s s+d
   Q: 189  SSPALDVVGIGCGDGKIHVHNIRYDETIATFTHTTRGGVTALSFRTDGhAFLAAGGSSGAISIWDLEKKKLQTVINDAHDSEVASLHFLANEPVLMSNSKD 289
           *****************************88888999**************************************************************** PP
   S: 202  gtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +++k+w +       + +r   gh+++++++r   ++  ++sg++D+  r++ + +++  + l++ n
   Q: 290  NSLKMWIFDsldgDARLLRYRSGHSAPPTCIRYYGEGRCILSGGQDRAFRLFSTIQDQQSRELSQGN 356
           ******999898877789999******************************9666666666666554 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MGIFEAFRAI GYISDGVPFA VQRSGVETLV TVSVGKAWQR FNCSKLLLVF VGPQLEKSIR 60
ALACYEGFTF AASGNNVVVF DRAHQIAVWK AHSSKIKYLL EFGHFILSSD TEGHVCVWDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATTT TCGAAGCCTT CCGGGCGATC GGCTACATCA GCGATGGCGT CCCATTCGCA 60
GTGCAGCGGA GCGGCGTTGA GACGCTCGTC ACGGTGAGCG TCGGCAAGGC GTGGCAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

smo:SELMODRAFT_78691

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002289	Ailuropoda melanoleuca	36.17	6.00e-153	534.00
IUUC-Atr-002859	Amborella trichopoda	53.94	0.00e+00	870.00
IUUC-Aca-004339	Anolis carolinensis	35.16	8.00e-147	513.00
IUUC-Aly-005913	Arabidopsis lyrata	56.44	0.00e+00	978.00
IUUC-Ath-006767	Arabidopsis thaliana	56.22	0.00e+00	977.00
IUUC-Ago-007763	Ashbya gossypii	30.47	7.00e-105	374.00
IUUC-Acl-008275	Aspergillus clavatus	31.21	3.00e-83	302.00
IUUC-Afl-008457	Aspergillus flavus	31.37	7.00e-73	267.00
IUUC-Afu-008914	Aspergillus fumigatus	29.13	2.00e-80	292.00
IUUC-Ani-009225	Aspergillus nidulans	32.17	7.00e-90	324.00
IUUC-Aor-010046	Aspergillus oryzae	29.73	8.00e-94	337.00
IUUC-Ate-010337	Aspergillus terreus	29.29	1.00e-90	327.00
IUUC-Ame-010963	Astyanax mexicanus	37.16	5.00e-154	537.00
IUUC-Bgr-011973	Blumeria graminis	29.50	2.00e-98	353.00
IUUC-Bta-012462	Bos taurus	35.97	7.00e-152	530.00
IUUC-Bci-013940	Botrytis cinerea	30.03	2.00e-106	379.00
IUUC-Bdi-014725	Brachypodium distachyon	54.05	0.00e+00	964.00
IUUC-Bol-016534	Brassica oleracea	55.82	0.00e+00	977.00
IUUC-Bra-016781	Brassica rapa	54.41	0.00e+00	951.00
IUUC-Cel-018581	Caenorhabditis elegans	27.03	1.00e-80	293.00
IUUC-Cja-019675	Callithrix jacchus	36.39	2.00e-161	561.00
IUUC-Cfa-020118	Canis familiaris	35.95	2.00e-151	529.00
IUUC-Cpo-021798	Cavia porcellus	37.47	1.00e-154	539.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	42.14	2.00e-43	169.00
IUUC-Csa-023547	Chlorocebus sabaeus	36.46	5.00e-152	531.00
IUUC-Cin-025339	Ciona intestinalis	32.29	1.00e-142	499.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.99	2.00e-95	343.00
IUUC-Dre-027733	Danio rerio	35.86	4.00e-151	528.00
IUUC-Ete-032930	Echinops telfairi	35.90	1.00e-128	453.00
IUUC-Eca-033302	Equus caballus	36.38	1.00e-150	526.00
IUUC-Eeu-034516	Erinaceus europaeus	35.64	3.00e-157	548.00
IUUC-Fal-037024	Ficedula albicollis	35.09	2.00e-149	522.00
IUUC-Fox-037787	Fusarium oxysporum	28.74	7.00e-87	314.00
IUUC-Fso-038378	Fusarium solani	28.72	4.00e-87	315.00
IUUC-Gmo-039637	Gadus morhua	38.79	1.00e-88	320.00
IUUC-Ggr-040108	Gaeumannomyces graminis	28.96	1.00e-93	337.00
IUUC-Gga-040982	Gallus gallus	34.72	1.00e-156	546.00
IUUC-Gac-041565	Gasterosteus aculeatus	35.16	1.00e-135	476.00
IUUC-Gma-043414	Glycine max	55.59	0.00e+00	983.00
IUUC-Ggo-045463	Gorilla gorilla	36.19	4.00e-154	538.00
IUUC-Hsa-045675	Homo sapiens	36.48	8.00e-157	546.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	36.10	1.00e-162	566.00
IUUC-Kpa-049164	Komagataella pastoris	30.84	2.00e-105	375.00
IUUC-Lch-050476	Latimeria chalumnae	34.31	1.00e-151	529.00
IUUC-Lpe-051556	Leersia perrieri	52.33	0.00e+00	704.00
IUUC-Loc-052820	Lepisosteus oculatus	36.75	5.00e-155	541.00
IUUC-Lma-052961	Leptosphaeria maculans	29.31	1.00e-88	320.00
IUUC-Laf-054006	Loxodonta africana	35.14	2.00e-143	502.00
IUUC-Mcc-055037	Macaca mulatta	36.49	1.00e-155	543.00
IUUC-Mor-057280	Magnaporthe oryzae	28.78	6.00e-97	348.00
IUUC-Mpo-057408	Magnaporthe poae	28.54	5.00e-89	322.00
IUUC-Mtr-058473	Medicago truncatula	54.61	0.00e+00	985.00
IUUC-Mla-058892	Melampsora laricipopulina	29.97	4.00e-97	348.00
IUUC-Mga-059598	Meleagris gallopavo	30.03	1.00e-103	370.00
IUUC-Mmr-061239	Microcebus murinus	35.87	2.00e-150	525.00
IUUC-Mdo-062471	Monodelphis domestica	35.65	6.00e-144	504.00
IUUC-Mmu-063872	Mus musculus	37.25	4.00e-161	561.00
IUUC-Mac-064631	Musa acuminata	53.71	0.00e+00	865.00
IUUC-Mpu-066039	Mustela putorius furo	36.60	4.00e-163	568.00
IUUC-Mlu-067485	Myotis lucifugus	35.57	1.00e-150	526.00
IUUC-Nfi-068319	Neosartorya fischeri	27.86	2.00e-84	306.00
IUUC-Ncr-068725	Neurospora crassa	29.21	5.00e-92	332.00
IUUC-Nle-069050	Nomascus leucogenys	36.37	1.00e-155	543.00
IUUC-Oan-072826	Ornithorhynchus anatinus	36.23	4.00e-158	551.00
IUUC-Ocu-073995	Oryctolagus cuniculus	35.83	7.00e-148	517.00
IUUC-Obr-076451	Oryza brachyantha	54.89	0.00e+00	1009.00
IUUC-Ogl-077535	Oryza glaberrima	54.49	0.00e+00	964.00
IUUC-Oin-079431	Oryza indica	54.78	0.00e+00	971.00
IUUC-Olo-080495	Oryza longistaminata	49.12	0.00e+00	784.00
IUUC-Oni-082336	Oryza nivara	53.65	0.00e+00	925.00
IUUC-Oru-084500	Oryza rufipogon	49.25	0.00e+00	814.00
IUUC-Osa-086242	Oryza sativa	54.89	0.00e+00	971.00
IUUC-Ola-086612	Oryzias latipes	37.20	9.00e-117	413.00
IUUC-Olu-087703	Ostreococcus lucimarinus	37.01	2.00e-155	542.00
IUUC-Oga-088572	Otolemur garnettii	36.21	2.00e-152	532.00
IUUC-Oar-090363	Ovis aries	35.58	9.00e-155	540.00
IUUC-Ptr-090477	Pan troglodytes	36.37	8.00e-155	540.00
IUUC-Pan-092914	Papio anubis	36.49	3.00e-156	545.00
IUUC-Pma-094303	Petromyzon marinus	36.43	4.00e-116	411.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.03	3.00e-80	292.00
IUUC-Pab-097669	Pongo abelii	36.37	3.00e-155	541.00
IUUC-Pop-098835	Populus trichocarpa	55.92	0.00e+00	993.00
IUUC-Pca-101097	Procavia capensis	37.46	6.00e-57	215.00
IUUC-Ppe-101430	Prunus persica	56.14	0.00e+00	1016.00
IUUC-Pva-103152	Pteropus vampyrus	36.60	7.00e-156	543.00
IUUC-Pgr-103517	Puccinia graminis	29.01	5.00e-115	408.00
IUUC-Ptt-103697	Puccinia triticina	28.40	9.00e-90	323.00
IUUC-Pte-104121	Pyrenophora teres	28.56	5.00e-88	318.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	28.56	5.00e-88	318.00
IUUC-Rno-105435	Rattus norvegicus	37.09	2.00e-160	558.00
IUUC-Sce-106202	Saccharomyces cerevisiae	29.71	1.00e-91	330.00
IUUC-Sha-107272	Sarcophilus harrisii	36.38	2.00e-143	502.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.17	1.00e-147	516.00
IUUC-Spo-108256	Schizosaccharomyces pombe	34.71	3.00e-148	518.00
IUUC-Sly-111181	Solanum lycopersicum	55.06	0.00e+00	974.00
IUUC-Stu-112018	Solanum tuberosum	55.06	0.00e+00	980.00
IUUC-Sbi-114282	Sorghum bicolor	54.60	0.00e+00	1007.00
IUUC-Ssc-115287	Sus scrofa	36.08	1.00e-155	543.00
IUUC-Tgu-117138	Taeniopygia guttata	33.06	4.00e-121	428.00
IUUC-Tsy-119502	Tarsius syrichta	31.11	1.00e-108	386.00
IUUC-Tca-121506	Theobroma cacao	55.37	0.00e+00	967.00
IUUC-Tre-122166	Trichoderma reesei	28.36	7.00e-101	361.00
IUUC-Tae-122836	Triticum aestivum	53.83	0.00e+00	1004.00
IUUC-Tme-127157	Tuber melanosporum	29.57	2.00e-89	323.00
IUUC-Ttr-128886	Tursiops truncatus	35.29	2.00e-151	529.00
IUUC-Uma-129439	Ustilago maydis	30.02	1.00e-82	301.00
IUUC-Vpa-130456	Vicugna pacos	36.10	2.00e-154	539.00
IUUC-Vvi-131086	Vitis vinifera	55.63	0.00e+00	1027.00
IUUC-Xtr-131829	Xenopus tropicalis	36.28	4.00e-163	567.00
IUUC-Xma-133588	Xiphophorus maculatus	36.02	2.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence