iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028428

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein (C3H2C3 type) 6

Genbank Nucleotide ID

AL929009

Gene Name

rnf6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000077955.3	ENSDART00000109587.2	ENSDARP00000099863.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.3	684	725

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 684  CSVCINEYaqGNKLRRLPCAHEFHIHCIDRW------LSENNTCPICR 725
           ********66333999***************......**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

VVCVAPLVPS WLHCNQSAEE RELVHITAAV SAVSVVMDPP GGRDERHRQA ERLRREEAYY 60
HFINELSEEE YRLMRDSNLL GTPGEVTAEE LRQRLDGAKE RVSSQPRPEP RPQSSEAEGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTTTGTG TGGCTCCGTT GGTCCCATCT TGGCTACATT GTAATCAGAG CGCAGAGGAA 60
AGAGAACTCG TCCATATTAC AGCTGCTGTT TCAGGTACTT ACATATCTAT TATGAGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060765--P:regulation of androgen receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001415	Ailuropoda melanoleuca	64.58	5.00e-94	338.00
IUUC-Apl-003834	Anas platyrhynchos	69.49	1.00e-111	397.00
IUUC-Aca-004373	Anolis carolinensis	61.11	3.00e-84	306.00
IUUC-Aly-005870	Arabidopsis lyrata	42.55	7.00e-20	91.70
IUUC-Ath-006611	Arabidopsis thaliana	44.21	2.00e-20	92.80
IUUC-Ame-011730	Astyanax mexicanus	83.21	3.00e-118	419.00
IUUC-Bta-012763	Bos taurus	68.79	2.00e-49	191.00
IUUC-Bdi-014880	Brachypodium distachyon	43.24	5.00e-15	75.10
IUUC-Cja-018980	Callithrix jacchus	62.07	4.00e-97	349.00
IUUC-Cfa-020416	Canis familiaris	63.54	6.00e-92	332.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	34.78	3.00e-12	68.20
IUUC-Csa-023246	Chlorocebus sabaeus	63.32	2.00e-92	333.00
IUUC-Cho-024749	Choloepus hoffmanni	59.93	2.00e-92	333.00
IUUC-Cme-027313	Cyanidioschyzon merolae	50.98	2.00e-13	70.50
IUUC-Dno-029617	Dasypus novemcinctus	60.20	2.00e-91	330.00
IUUC-Dor-030800	Dipodomys ordii	56.19	2.00e-57	217.00
IUUC-Ete-032882	Echinops telfairi	60.99	4.00e-92	332.00
IUUC-Eca-033892	Equus caballus	63.07	1.00e-90	327.00
IUUC-Eeu-034563	Erinaceus europaeus	58.80	4.00e-68	252.00
IUUC-Fca-035765	Felis catus	60.67	4.00e-92	332.00
IUUC-Fal-036981	Ficedula albicollis	68.53	1.00e-108	387.00
IUUC-Gmo-039344	Gadus morhua	73.80	3.00e-130	459.00
IUUC-Gga-041114	Gallus gallus	67.24	6.00e-108	385.00
IUUC-Gac-042220	Gasterosteus aculeatus	78.40	2.00e-126	446.00
IUUC-Ggo-044902	Gorilla gorilla	62.76	2.00e-98	353.00
IUUC-Hsa-046548	Homo sapiens	62.76	2.00e-98	353.00
IUUC-Hvu-047652	Hordeum vulgare	41.67	9.00e-15	74.30
IUUC-Itr-048447	Ictidomys tridecemlineatus	63.32	2.00e-92	333.00
IUUC-Lch-050541	Latimeria chalumnae	69.12	2.00e-108	387.00
IUUC-Lpe-051680	Leersia perrieri	42.11	1.00e-14	74.70
IUUC-Laf-054296	Loxodonta africana	60.21	9.00e-87	314.00
IUUC-Mcc-054858	Macaca mulatta	64.01	1.00e-93	337.00
IUUC-Mpo-057470	Magnaporthe poae	55.56	3.00e-13	70.10
IUUC-Mtr-057798	Medicago truncatula	37.21	2.00e-14	74.30
IUUC-Mga-059307	Meleagris gallopavo	67.35	3.00e-105	376.00
IUUC-Mmr-060699	Microcebus murinus	59.47	8.00e-90	325.00
IUUC-Mdo-062162	Monodelphis domestica	67.35	6.00e-100	358.00
IUUC-Mmu-064188	Mus musculus	59.79	3.00e-85	309.00
IUUC-Mpu-065891	Mustela putorius furo	61.54	2.00e-89	323.00
IUUC-Mlu-067177	Myotis lucifugus	60.47	6.00e-87	315.00
IUUC-Nle-069127	Nomascus leucogenys	62.41	1.00e-98	354.00
IUUC-Ont-072086	Oreochromis niloticus	65.61	1.00e-130	460.00
IUUC-Oba-075403	Oryza barthii	42.11	1.00e-14	74.70
IUUC-Ogl-077574	Oryza glaberrima	42.11	1.00e-14	74.70
IUUC-Ogu-077986	Oryza glumaepatula	42.11	1.00e-14	74.70
IUUC-Oin-079091	Oryza indica	42.11	1.00e-14	74.70
IUUC-Olo-080996	Oryza longistaminata	42.47	1.00e-13	71.20
IUUC-Oni-082260	Oryza nivara	42.11	1.00e-14	74.70
IUUC-Opu-083606	Oryza punctata	44.44	6.00e-13	68.60
IUUC-Oru-084794	Oryza rufipogon	42.11	1.00e-14	74.70
IUUC-Osa-085348	Oryza sativa	42.11	1.00e-14	74.70
IUUC-Ola-087452	Oryzias latipes	69.88	1.00e-122	434.00
IUUC-Oga-088750	Otolemur garnettii	59.00	6.00e-87	315.00
IUUC-Oar-089523	Ovis aries	61.62	9.00e-85	308.00
IUUC-Ptr-091533	Pan troglodytes	62.98	2.00e-98	353.00
IUUC-Pan-092675	Papio anubis	63.32	5.00e-89	322.00
IUUC-Psi-093735	Pelodiscus sinensis	69.05	7.00e-107	381.00
IUUC-Ppa-095806	Physcomitrella patens	42.22	2.00e-15	77.40
IUUC-Pfo-096637	Poecilia formosa	70.45	7.00e-127	448.00
IUUC-Pab-098486	Pongo abelii	62.98	8.00e-99	354.00
IUUC-Pca-100143	Procavia capensis	63.18	6.00e-93	335.00
IUUC-Pva-103151	Pteropus vampyrus	65.49	3.00e-91	329.00
IUUC-Pgr-103691	Puccinia graminis	33.33	2.00e-09	57.00
IUUC-Rno-105745	Rattus norvegicus	62.59	3.00e-43	170.00
IUUC-Sha-106681	Sarcophilus harrisii	66.89	3.00e-98	352.00
IUUC-Sit-109852	Setaria italica	42.11	1.00e-14	74.70
IUUC-Sar-113229	Sorex araneus	61.43	3.00e-88	319.00
IUUC-Sbi-114435	Sorghum bicolor	42.11	1.00e-14	74.70
IUUC-Ssc-115345	Sus scrofa	69.29	1.00e-44	174.00
IUUC-Tgu-117477	Taeniopygia guttata	70.00	3.00e-107	382.00
IUUC-Tru-118302	Takifugu rubripes	76.32	1.00e-127	450.00
IUUC-Tsy-119338	Tarsius syrichta	47.33	4.00e-65	243.00
IUUC-Tni-119675	Tetraodon nigroviridis	74.48	1.00e-110	393.00
IUUC-Tae-124315	Triticum aestivum	45.33	1.00e-14	73.90
IUUC-Tur-126047	Triticum urartu	41.77	3.00e-14	72.80
IUUC-Ttr-128367	Tursiops truncatus	57.79	4.00e-66	246.00
IUUC-Vpa-130480	Vicugna pacos	62.59	2.00e-86	313.00
IUUC-Vvi-130961	Vitis vinifera	42.67	1.00e-13	70.90
IUUC-Xma-133863	Xiphophorus maculatus	71.04	2.00e-128	453.00
IUUC-Yli-134656	Yarrowia lipolytica	43.75	2.00e-09	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence