iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107479

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01010242

Gene Name

VPS18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016111.1	ENSSHAT00000019137.1	ENSSHAP00000018981.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	93.06	0.00e+00	1823.00	IUUC-Hsa-046635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

VASVPEPRYE DSLSRSAVLQ PGCASVGIPH SGFVNVPLEK EAPIFTKQRI DFTPSDRITN 60
LVVSCNQLCM SLGKDTLLRI DLGKANEPNH VELGRKDEAK VHKMFLDHTG SHLLIALSST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGCCTCCG TTCCGGAGCC CCGGCCNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin
PF05131--Pep3_Vps18

Gene Ontology

GO:0005884--C:actin filament
GO:0030123--C:AP-3 adaptor complex
GO:0033263--C:CORVET complex
GO:0005769--C:early endosome
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0005765--C:lysosomal membrane
GO:0007032--P:endosome organization
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:0007040--P:lysosome organization
GO:0016192--P:vesicle-mediated transport
GO:0046718--P:viral entry into host cell

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	32.48	3.00e-118	419.00
IUUC-Aml-001240	Ailuropoda melanoleuca	92.96	0.00e+00	1811.00
IUUC-Atr-003125	Amborella trichopoda	32.24	8.00e-130	457.00
IUUC-Apl-004181	Anas platyrhynchos	72.20	0.00e+00	1462.00
IUUC-Aca-004437	Anolis carolinensis	72.50	0.00e+00	1445.00
IUUC-Aly-006046	Arabidopsis lyrata	33.57	2.00e-144	506.00
IUUC-Ath-006932	Arabidopsis thaliana	33.61	5.00e-144	505.00
IUUC-Ago-007800	Ashbya gossypii	23.12	3.00e-60	226.00
IUUC-Acl-008035	Aspergillus clavatus	31.98	1.00e-119	424.00
IUUC-Afl-008714	Aspergillus flavus	31.94	2.00e-114	407.00
IUUC-Afu-009063	Aspergillus fumigatus	33.44	4.00e-122	432.00
IUUC-Ani-009384	Aspergillus nidulans	32.66	7.00e-123	434.00
IUUC-Ang-009507	Aspergillus niger	33.16	1.00e-121	430.00
IUUC-Aor-010094	Aspergillus oryzae	31.94	3.00e-114	406.00
IUUC-Ate-010421	Aspergillus terreus	31.91	4.00e-104	372.00
IUUC-Ame-011797	Astyanax mexicanus	66.00	0.00e+00	1323.00
IUUC-Bgr-012107	Blumeria graminis	32.57	8.00e-120	424.00
IUUC-Bta-012339	Bos taurus	93.58	0.00e+00	1855.00
IUUC-Bci-013895	Botrytis cinerea	34.14	2.00e-126	447.00
IUUC-Bdi-014554	Brachypodium distachyon	34.12	2.00e-134	473.00
IUUC-Bol-015270	Brassica oleracea	33.81	3.00e-146	512.00
IUUC-Bra-017424	Brassica rapa	33.61	4.00e-141	495.00
IUUC-Cel-018455	Caenorhabditis elegans	25.98	3.00e-89	323.00
IUUC-Cja-019629	Callithrix jacchus	91.72	0.00e+00	1797.00
IUUC-Cfa-020425	Canis familiaris	92.86	0.00e+00	1803.00
IUUC-Cpo-021349	Cavia porcellus	91.31	0.00e+00	1770.00
IUUC-Cre-022799	Chlamydomonas reinhardtii	25.54	7.00e-32	132.00
IUUC-Csa-023559	Chlorocebus sabaeus	92.44	0.00e+00	1803.00
IUUC-Cho-024862	Choloepus hoffmanni	85.57	0.00e+00	1329.00
IUUC-Cin-025599	Ciona intestinalis	41.82	0.00e+00	636.00
IUUC-Csv-026152	Ciona savignyi	42.23	0.00e+00	771.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	33.04	4.00e-120	426.00
IUUC-Cne-026907	Cryptococcus neoformans	31.74	2.00e-120	427.00
IUUC-Dre-027747	Danio rerio	64.15	0.00e+00	1352.00
IUUC-Dno-029668	Dasypus novemcinctus	92.45	0.00e+00	1796.00
IUUC-Dor-030404	Dipodomys ordii	87.56	0.00e+00	1698.00
IUUC-Dse-031345	Dothistroma septosporum	33.84	7.00e-130	458.00
IUUC-Dme-031711	Drosophila melanogaster	34.28	1.00e-147	516.00
IUUC-Ete-032308	Echinops telfairi	89.19	0.00e+00	925.00
IUUC-Eca-033637	Equus caballus	93.58	0.00e+00	1822.00
IUUC-Eeu-035151	Erinaceus europaeus	91.50	0.00e+00	1347.00
IUUC-Fca-035585	Felis catus	92.75	0.00e+00	1797.00
IUUC-Fal-037122	Ficedula albicollis	71.08	0.00e+00	1449.00
IUUC-Fox-038030	Fusarium oxysporum	34.08	8.00e-129	454.00
IUUC-Fso-038426	Fusarium solani	34.35	1.00e-135	477.00
IUUC-Gmo-038784	Gadus morhua	66.00	0.00e+00	1309.00
IUUC-Ggr-039973	Gaeumannomyces graminis	34.40	1.00e-130	460.00
IUUC-Gga-040692	Gallus gallus	73.22	0.00e+00	1485.00
IUUC-Gac-041868	Gasterosteus aculeatus	65.47	0.00e+00	1325.00
IUUC-Gma-044274	Glycine max	34.15	3.00e-143	502.00
IUUC-Ggo-045053	Gorilla gorilla	92.13	0.00e+00	1796.00
IUUC-Hsa-046635	Homo sapiens	92.13	0.00e+00	1796.00
IUUC-Hvu-047361	Hordeum vulgare	33.78	9.00e-135	474.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	92.55	0.00e+00	1793.00
IUUC-Kpa-049270	Komagataella pastoris	23.31	4.00e-76	279.00
IUUC-Lch-050188	Latimeria chalumnae	67.73	0.00e+00	1246.00
IUUC-Lpe-051026	Leersia perrieri	34.62	2.00e-139	489.00
IUUC-Loc-051821	Lepisosteus oculatus	66.87	0.00e+00	1358.00
IUUC-Lma-053178	Leptosphaeria maculans	37.02	4.00e-108	385.00
IUUC-Laf-053552	Loxodonta africana	92.44	0.00e+00	1796.00
IUUC-Mcc-054667	Macaca mulatta	92.03	0.00e+00	1791.00
IUUC-Meu-056422	Macropus eugenii	98.47	0.00e+00	923.00
IUUC-Mor-056981	Magnaporthe oryzae	32.88	7.00e-127	448.00
IUUC-Mtr-058703	Medicago truncatula	33.91	3.00e-137	482.00
IUUC-Mla-059088	Melampsora laricipopulina	34.38	1.00e-99	357.00
IUUC-Mga-059798	Meleagris gallopavo	72.91	0.00e+00	1479.00
IUUC-Mvi-060404	Microbotryum violaceum	33.30	4.00e-129	456.00
IUUC-Mmr-061630	Microcebus murinus	92.86	0.00e+00	1805.00
IUUC-Mdo-062354	Monodelphis domestica	97.51	0.00e+00	1946.00
IUUC-Mmu-063199	Mus musculus	92.13	0.00e+00	1798.00
IUUC-Mac-065595	Musa acuminata	35.97	2.00e-120	426.00
IUUC-Mpu-066596	Mustela putorius furo	93.37	0.00e+00	1823.00
IUUC-Mlu-067455	Myotis lucifugus	92.96	0.00e+00	1804.00
IUUC-Nfi-068565	Neosartorya fischeri	33.62	3.00e-122	432.00
IUUC-Ncr-068748	Neurospora crassa	33.33	1.00e-131	464.00
IUUC-Nle-068979	Nomascus leucogenys	87.72	0.00e+00	1613.00
IUUC-Opr-070711	Ochotona princeps	92.34	0.00e+00	1797.00
IUUC-Ont-072603	Oreochromis niloticus	64.65	0.00e+00	1334.00
IUUC-Oan-073136	Ornithorhynchus anatinus	84.32	0.00e+00	842.00
IUUC-Ocu-074496	Oryctolagus cuniculus	93.17	0.00e+00	1802.00
IUUC-Oba-075933	Oryza barthii	33.44	3.00e-120	426.00
IUUC-Obr-076290	Oryza brachyantha	34.05	3.00e-140	493.00
IUUC-Ogu-078728	Oryza glumaepatula	33.44	2.00e-120	426.00
IUUC-Oin-079954	Oryza indica	33.68	3.00e-132	466.00
IUUC-Olo-081033	Oryza longistaminata	32.35	5.00e-115	408.00
IUUC-Ome-081797	Oryza meridionalis	33.41	6.00e-127	448.00
IUUC-Oni-082802	Oryza nivara	33.44	2.00e-120	426.00
IUUC-Opu-083595	Oryza punctata	35.34	9.00e-140	491.00
IUUC-Oru-084199	Oryza rufipogon	33.44	2.00e-120	426.00
IUUC-Osa-085349	Oryza sativa	34.15	5.00e-140	491.00
IUUC-Ola-087482	Oryzias latipes	65.06	0.00e+00	1317.00
IUUC-Olu-087797	Ostreococcus lucimarinus	25.08	6.00e-71	262.00
IUUC-Oga-088817	Otolemur garnettii	93.27	0.00e+00	1826.00
IUUC-Oar-090350	Ovis aries	92.59	0.00e+00	1438.00
IUUC-Ptr-090999	Pan troglodytes	91.82	0.00e+00	1792.00
IUUC-Pan-092704	Papio anubis	92.03	0.00e+00	1791.00
IUUC-Psi-093529	Pelodiscus sinensis	73.11	0.00e+00	1456.00
IUUC-Pma-094400	Petromyzon marinus	55.89	0.00e+00	1095.00
IUUC-Pno-094875	Phaeosphaeria nodorum	34.09	2.00e-127	449.00
IUUC-Ppa-095231	Physcomitrella patens	33.17	7.00e-139	488.00
IUUC-Pfo-096967	Poecilia formosa	65.52	0.00e+00	1334.00
IUUC-Pab-098300	Pongo abelii	91.82	0.00e+00	1790.00
IUUC-Pop-098966	Populus trichocarpa	33.99	3.00e-147	515.00
IUUC-Pca-100643	Procavia capensis	92.01	0.00e+00	1706.00
IUUC-Ppe-101589	Prunus persica	34.12	1.00e-143	503.00
IUUC-Pva-102766	Pteropus vampyrus	92.24	0.00e+00	1758.00
IUUC-Pgr-103330	Puccinia graminis	30.38	3.00e-114	406.00
IUUC-Ptt-103809	Puccinia triticina	31.65	2.00e-97	350.00
IUUC-Pte-104319	Pyrenophora teres	32.28	7.00e-126	444.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	31.31	4.00e-113	402.00
IUUC-Rno-105817	Rattus norvegicus	91.61	0.00e+00	1791.00
IUUC-Sce-106255	Saccharomyces cerevisiae	23.09	1.00e-46	181.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	24.78	4.00e-76	279.00
IUUC-Spo-108146	Schizosaccharomyces pombe	26.60	2.00e-79	290.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	34.16	4.00e-118	419.00
IUUC-Smo-109585	Selaginella moellendorffii	34.34	2.00e-130	459.00
IUUC-Sit-110275	Setaria italica	34.32	5.00e-138	485.00
IUUC-Sly-111073	Solanum lycopersicum	34.03	8.00e-143	501.00
IUUC-Stu-112392	Solanum tuberosum	30.23	9.00e-16	76.60
IUUC-Sar-113718	Sorex araneus	89.35	0.00e+00	1728.00
IUUC-Sbi-114080	Sorghum bicolor	34.46	5.00e-143	501.00
IUUC-Sre-115160	Sporisorium reilianum	31.59	2.00e-127	450.00
IUUC-Ssc-115997	Sus scrofa	93.06	0.00e+00	1815.00
IUUC-Tgu-116904	Taeniopygia guttata	72.63	0.00e+00	1330.00
IUUC-Tru-117946	Takifugu rubripes	63.32	0.00e+00	1316.00
IUUC-Tni-119692	Tetraodon nigroviridis	63.63	0.00e+00	1315.00
IUUC-Tca-121455	Theobroma cacao	33.99	1.00e-145	510.00
IUUC-Tre-122128	Trichoderma reesei	33.37	2.00e-131	463.00
IUUC-Tvi-122657	Trichoderma virens	33.57	4.00e-133	469.00
IUUC-Tae-125953	Triticum aestivum	34.84	3.00e-136	479.00
IUUC-Tur-126110	Triticum urartu	31.16	2.00e-104	373.00
IUUC-Tme-127173	Tuber melanosporum	30.52	9.00e-107	381.00
IUUC-Ttr-128420	Tursiops truncatus	92.55	0.00e+00	1831.00
IUUC-Uma-129580	Ustilago maydis	31.47	1.00e-125	444.00
IUUC-Vda-129790	Verticillium dahliae	32.25	8.00e-118	418.00
IUUC-Vvi-131095	Vitis vinifera	33.13	5.00e-140	491.00
IUUC-Xtr-131906	Xenopus tropicalis	67.69	0.00e+00	1353.00
IUUC-Xma-134197	Xiphophorus maculatus	65.83	0.00e+00	1338.00
IUUC-Yli-134617	Yarrowia lipolytica	28.35	4.00e-106	379.00
IUUC-Zma-134979	Zea mays	32.22	4.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence