iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099375

UUCD1 version

UUC-PoT-00937

Ensembl Protein ID

POPTR_0008s00640.1

UniProt Accession

A9PBF3; A9PBF3_POPTR

Genbank Protein ID

ABK93706.1; EEE88295.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

EF145560; CM000344

Gene Name

POPTRDRAFT_655648; POPTR_0008s00640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s00640	POPTR_0008s00640.1	POPTR_0008s00640.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	71.71	5.00e-104	374.00	IUUC-Ath-007215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQLVSNDSRQ KDFSESEPIL SQSNILQHSE EESSSSREIK SLGRDCDVHV AELESICIDE 60
TSLLVNPDQP QCRICLDIGG EDLIAPCHCK GTQKHVHRSC LDNWRSTKEG FAFAHCTECR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTTTACC CACCCTTTCT CCGTCTCTAT GTTTTCCTCT GCATTGACTT GGCAATCTAC 60
AAGAAAAACA ACACGACAAA TCTCAAATCT TTCAAAACTC TCAAATTCAA AGCAAGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0008s00640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006064	Arabidopsis lyrata	83.33	7.00e-98	349.00
IUUC-Ath-007215	Arabidopsis thaliana	71.71	2.00e-98	351.00
IUUC-Acl-008264	Aspergillus clavatus	23.28	3.00e-05	42.00
IUUC-Cre-022957	Chlamydomonas reinhardtii	29.28	1.00e-11	63.20
IUUC-Ola-087137	Oryzias latipes	41.67	5.00e-09	54.30
IUUC-Sha-106628	Sarcophilus harrisii	25.67	3.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence