iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051338

Ensembl Protein ID

LPERR11G15640.1

UniProt Accession

A0A0D9XTZ5; A0A0D9XTZ5_9ORYZ

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR11G15640	LPERR11G15640.1	LPERR11G15640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-22	79.6	50	85
UBD/Beta-Prp	1.50e-54	186.0	6	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ v+ ++   d  +l+++s D t+k+WD+ +g 
   Q: 50   GHNGAVWTCDVsRDsSRLITASADQTVKLWDVQSGA 85
           8***********77799**************99885 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......... 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+++++s+++++l+++s+d+t+++wd+++g +l +          
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWTCDVSRDSSRLITASADQTVKLWDVQSGAELFTfrfdaparsv 99
           489******************************************************************************************* PP
   S: 132  .........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtd 181
                                                    +  g +g ++ +v+ p ++ +++++ D t+r+Wd +tg++lr+    +g h++
   Q: 100  efsigdglavittdnfmenvptvqvkriaddpddqseesllVIVGIRGRITRAVWGPLNKTIITAGEDATIRIWDTETGTCLRQSdpeQG-HQK 192
           ****************************************9999*******************************************555.*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           ++ sls + +  ++++gsld++ klwd +t + ++t+   + +v+ v+
   Q: 193  AISSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTER-PVNAVD 239
           ********************************999998654.444444 PP

Organism

Leersia perrieri

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYRG HNGAVWTCDV 60
SRDSSRLITA SADQTVKLWD VQSGAELFTF RFDAPARSVE FSIGDGLAVI TTDNFMENVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCCCTCCC GTTCAGACCC ACCCACAAAA CCATCCCACC ACAAAATCCC CAACCCATCC 60
GCTCGCTAGG GTTTTCCCAC TCCGCCGCAA AATCACACGC TCCAGATCCC TCCACCGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	94.17	2.00e-63	235.00
IUUC-Aml-001321	Ailuropoda melanoleuca	45.81	3.00e-79	287.00
IUUC-Atr-002468	Amborella trichopoda	68.86	4.00e-85	306.00
IUUC-Apl-003841	Anas platyrhynchos	45.81	4.00e-80	290.00
IUUC-Aca-005123	Anolis carolinensis	45.34	2.00e-81	295.00
IUUC-Aly-005473	Arabidopsis lyrata	76.04	2.00e-142	497.00
IUUC-Ath-007094	Arabidopsis thaliana	76.04	7.00e-142	495.00
IUUC-Ago-008000	Ashbya gossypii	41.19	3.00e-67	248.00
IUUC-Acl-008098	Aspergillus clavatus	44.20	3.00e-73	268.00
IUUC-Afl-008494	Aspergillus flavus	45.54	9.00e-77	279.00
IUUC-Afu-009080	Aspergillus fumigatus	43.26	2.00e-72	265.00
IUUC-Ani-009230	Aspergillus nidulans	46.03	3.00e-76	278.00
IUUC-Aor-010114	Aspergillus oryzae	45.54	9.00e-77	279.00
IUUC-Ate-010285	Aspergillus terreus	44.90	6.00e-75	273.00
IUUC-Ame-011534	Astyanax mexicanus	45.22	5.00e-80	290.00
IUUC-Bgr-012121	Blumeria graminis	42.63	2.00e-70	258.00
IUUC-Bta-013143	Bos taurus	45.98	8.00e-80	289.00
IUUC-Bci-013950	Botrytis cinerea	45.54	8.00e-77	279.00
IUUC-Bdi-015019	Brachypodium distachyon	86.50	1.00e-161	561.00
IUUC-Bol-015709	Brassica oleracea	73.97	4.00e-140	491.00
IUUC-Bra-017760	Brassica rapa	73.97	2.00e-141	495.00
IUUC-Cel-018226	Caenorhabditis elegans	40.50	2.00e-69	254.00
IUUC-Cja-019741	Callithrix jacchus	45.66	1.00e-79	289.00
IUUC-Cfa-021204	Canis familiaris	45.48	5.00e-79	286.00
IUUC-Cpo-021661	Cavia porcellus	45.48	5.00e-79	286.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	51.45	7.00e-96	342.00
IUUC-Csa-024038	Chlorocebus sabaeus	45.66	1.00e-79	289.00
IUUC-Cin-025597	Ciona intestinalis	46.62	5.00e-83	300.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	45.37	9.00e-76	276.00
IUUC-Cne-026838	Cryptococcus neoformans	42.77	2.00e-74	271.00
IUUC-Cme-027304	Cyanidioschyzon merolae	50.16	2.00e-81	295.00
IUUC-Dre-028567	Danio rerio	44.69	2.00e-81	295.00
IUUC-Dno-029171	Dasypus novemcinctus	45.81	1.00e-78	286.00
IUUC-Dor-030257	Dipodomys ordii	33.52	8.00e-27	113.00
IUUC-Dse-031191	Dothistroma septosporum	44.59	1.00e-75	275.00
IUUC-Dme-031879	Drosophila melanogaster	47.12	1.00e-84	305.00
IUUC-Ete-032336	Echinops telfairi	39.81	2.00e-42	164.00
IUUC-Eca-033259	Equus caballus	45.48	8.00e-79	286.00
IUUC-Eeu-035153	Erinaceus europaeus	41.80	2.00e-20	92.00
IUUC-Fca-036489	Felis catus	45.48	8.00e-79	286.00
IUUC-Fal-037485	Ficedula albicollis	45.48	7.00e-80	290.00
IUUC-Fox-037860	Fusarium oxysporum	44.23	6.00e-74	270.00
IUUC-Fso-038188	Fusarium solani	44.87	1.00e-72	266.00
IUUC-Gmo-039311	Gadus morhua	44.19	4.00e-79	287.00
IUUC-Ggr-040045	Gaeumannomyces graminis	45.40	3.00e-75	274.00
IUUC-Gga-040645	Gallus gallus	45.14	4.00e-79	287.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.51	1.00e-79	288.00
IUUC-Gma-043930	Glycine max	81.67	2.00e-152	530.00
IUUC-Ggo-045578	Gorilla gorilla	45.66	1.00e-79	289.00
IUUC-Hsa-046734	Homo sapiens	45.66	1.00e-79	289.00
IUUC-Hvu-047553	Hordeum vulgare	87.14	6.00e-163	565.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	45.48	7.00e-79	286.00
IUUC-Kpa-049325	Komagataella pastoris	43.77	6.00e-72	263.00
IUUC-Lch-049620	Latimeria chalumnae	45.18	4.00e-78	283.00
IUUC-Loc-052094	Lepisosteus oculatus	40.19	5.00e-67	246.00
IUUC-Lma-053047	Leptosphaeria maculans	46.96	7.00e-79	286.00
IUUC-Laf-053801	Loxodonta africana	45.72	1.00e-76	278.00
IUUC-Mcc-055498	Macaca mulatta	40.71	3.00e-61	228.00
IUUC-Meu-056729	Macropus eugenii	42.31	2.00e-71	261.00
IUUC-Mor-057025	Magnaporthe oryzae	45.22	2.00e-73	268.00
IUUC-Mpo-057511	Magnaporthe poae	46.98	1.00e-75	275.00
IUUC-Mtr-058051	Medicago truncatula	80.39	3.00e-151	526.00
IUUC-Mla-059061	Melampsora laricipopulina	41.90	8.00e-74	270.00
IUUC-Mga-059229	Meleagris gallopavo	45.19	1.00e-77	282.00
IUUC-Mvi-060399	Microbotryum violaceum	42.55	1.00e-70	259.00
IUUC-Mmr-060764	Microcebus murinus	45.98	3.00e-80	291.00
IUUC-Mdo-062088	Monodelphis domestica	45.02	1.00e-79	288.00
IUUC-Mmu-064304	Mus musculus	45.66	6.00e-80	290.00
IUUC-Mac-065520	Musa acuminata	81.37	5.00e-151	526.00
IUUC-Mpu-066340	Mustela putorius furo	45.48	8.00e-79	286.00
IUUC-Mlu-067111	Myotis lucifugus	45.81	2.00e-79	288.00
IUUC-Nfi-068478	Neosartorya fischeri	43.57	3.00e-73	267.00
IUUC-Ncr-068820	Neurospora crassa	45.83	1.00e-74	272.00
IUUC-Nle-069903	Nomascus leucogenys	45.48	4.00e-79	287.00
IUUC-Opr-070221	Ochotona princeps	44.69	5.00e-77	280.00
IUUC-Ont-071765	Oreochromis niloticus	45.34	1.00e-81	296.00
IUUC-Oan-073660	Ornithorhynchus anatinus	43.53	6.00e-66	243.00
IUUC-Ocu-074039	Oryctolagus cuniculus	45.48	5.00e-79	287.00
IUUC-Oba-075395	Oryza barthii	84.57	2.00e-154	537.00
IUUC-Obr-076334	Oryza brachyantha	88.10	9.00e-164	568.00
IUUC-Ogl-077751	Oryza glaberrima	93.89	6.00e-177	612.00
IUUC-Ogu-078207	Oryza glumaepatula	94.53	7.00e-177	612.00
IUUC-Oin-079878	Oryza indica	94.21	1.00e-176	611.00
IUUC-Olo-080677	Oryza longistaminata	80.00	9.00e-168	582.00
IUUC-Ome-081228	Oryza meridionalis	71.67	3.00e-94	337.00
IUUC-Oni-082411	Oryza nivara	81.67	6.00e-147	512.00
IUUC-Opu-083136	Oryza punctata	93.57	2.00e-176	610.00
IUUC-Oru-084916	Oryza rufipogon	91.56	8.00e-175	605.00
IUUC-Osa-085776	Oryza sativa	93.89	6.00e-177	612.00
IUUC-Ola-087053	Oryzias latipes	45.34	2.00e-80	291.00
IUUC-Olu-087602	Ostreococcus lucimarinus	59.62	5.00e-111	393.00
IUUC-Oga-088154	Otolemur garnettii	45.48	4.00e-79	287.00
IUUC-Oar-089915	Ovis aries	45.81	4.00e-79	287.00
IUUC-Ptr-091124	Pan troglodytes	37.34	7.00e-54	203.00
IUUC-Pan-092035	Papio anubis	45.66	1.00e-79	289.00
IUUC-Psi-094096	Pelodiscus sinensis	44.83	4.00e-47	180.00
IUUC-Pno-094988	Phaeosphaeria nodorum	43.22	1.00e-68	252.00
IUUC-Ppa-095536	Physcomitrella patens	76.53	2.00e-144	504.00
IUUC-Pfo-096101	Poecilia formosa	44.37	2.00e-80	291.00
IUUC-Pab-097726	Pongo abelii	45.66	1.00e-79	289.00
IUUC-Pop-099617	Populus trichocarpa	79.10	1.00e-149	521.00
IUUC-Pca-101014	Procavia capensis	45.98	4.00e-80	290.00
IUUC-Ppe-101320	Prunus persica	78.53	2.00e-148	517.00
IUUC-Pva-102789	Pteropus vampyrus	41.48	8.00e-68	249.00
IUUC-Pgr-103479	Puccinia graminis	42.63	2.00e-72	265.00
IUUC-Ptt-103981	Puccinia triticina	42.63	2.00e-73	268.00
IUUC-Pte-104278	Pyrenophora teres	46.01	7.00e-76	276.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	46.01	7.00e-76	276.00
IUUC-Rno-105867	Rattus norvegicus	40.82	1.00e-63	236.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.10	2.00e-69	255.00
IUUC-Sha-107039	Sarcophilus harrisii	45.02	2.00e-79	288.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	42.19	2.00e-75	275.00
IUUC-Spo-108314	Schizosaccharomyces pombe	44.55	4.00e-80	290.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	45.22	1.00e-76	278.00
IUUC-Smo-108728	Selaginella moellendorffii	71.70	9.00e-135	472.00
IUUC-Sit-110801	Setaria italica	87.78	1.00e-165	575.00
IUUC-Sly-111326	Solanum lycopersicum	77.49	1.00e-145	508.00
IUUC-Stu-112458	Solanum tuberosum	78.46	9.00e-147	511.00
IUUC-Sbi-114063	Sorghum bicolor	86.82	2.00e-164	570.00
IUUC-Sre-115096	Sporisorium reilianum	44.06	8.00e-71	259.00
IUUC-Ssc-116080	Sus scrofa	45.98	7.00e-80	290.00
IUUC-Tgu-116988	Taeniopygia guttata	45.48	6.00e-80	290.00
IUUC-Tru-118766	Takifugu rubripes	44.69	2.00e-80	291.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.02	4.00e-81	293.00
IUUC-Tca-121316	Theobroma cacao	80.06	4.00e-150	523.00
IUUC-Tre-122097	Trichoderma reesei	45.71	8.00e-74	270.00
IUUC-Tvi-122442	Trichoderma virens	45.08	5.00e-73	267.00
IUUC-Tae-125800	Triticum aestivum	87.14	8.00e-163	565.00
IUUC-Tur-126334	Triticum urartu	76.85	2.00e-136	477.00
IUUC-Tme-127038	Tuber melanosporum	45.54	9.00e-78	283.00
IUUC-Ttr-128659	Tursiops truncatus	41.28	1.00e-62	232.00
IUUC-Uma-129464	Ustilago maydis	44.38	1.00e-70	259.00
IUUC-Vda-129841	Verticillium dahliae	46.01	2.00e-75	275.00
IUUC-Vvi-131076	Vitis vinifera	79.74	3.00e-151	526.00
IUUC-Xtr-132395	Xenopus tropicalis	46.30	1.00e-81	295.00
IUUC-Xma-133383	Xiphophorus maculatus	44.37	3.00e-80	291.00
IUUC-Yli-134586	Yarrowia lipolytica	42.30	8.00e-62	229.00
IUUC-Zma-135904	Zea mays	87.78	2.00e-166	577.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence