iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130998

UUCD1 version

UUC-ViV-00833

Ensembl Protein ID

VIT_02s0025g02240.t01

UniProt Accession

F6HU57; F6HU57_VITVI

Genbank Protein ID

CCB58280.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596251

Gene Name

VIT_02s0025g02240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_02s0025g02240	VIT_02s0025g02240.t01	VIT_02s0025g02240.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-27	94.1	417	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           H+d vtc++f   +d++++sGs Dg++++W+++++++
   Q: 417  HNDYVTCVDFnpvDDNYFISGSIDGKVRIWEVHRHKV 453
           9***********766****************998875 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGSSSEEEGD RFFDTREEFS DSASDGSVDF RSSNGVVDGD SDSFGYGLWI KNPQSVNERR 60
DKFLKWMNLD MDQNRITSEE SESESGDVCC DKIKIETDRA TENSGAVLRN SVSEDRVSSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTTGGCT TTGACCAGAA TTTGTTGCAA ACCCAGGTGA GAGAGATGCT CTTGGTTCCT 60
CCTCTTTTGT TGTAATTTTG ATTTGTTGAA TCATTTGGGC GTTTTGTGCG ATAATCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vvi:100249640

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cme-027130	Cyanidioschyzon merolae	33.89	4.00e-44	172.00
IUUC-Gma-042979	Glycine max	56.15	0.00e+00	748.00
IUUC-Mtr-058554	Medicago truncatula	54.26	0.00e+00	720.00
IUUC-Ncr-068874	Neurospora crassa	33.88	1.00e-50	194.00
IUUC-Pop-099254	Populus trichocarpa	58.81	0.00e+00	776.00
IUUC-Ppe-101343	Prunus persica	57.50	0.00e+00	793.00
IUUC-Sly-111162	Solanum lycopersicum	51.97	0.00e+00	711.00
IUUC-Stu-112354	Solanum tuberosum	51.91	0.00e+00	693.00
IUUC-Sar-112958	Sorex araneus	54.10	6.00e-16	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence