iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014569

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100831204; BRADI_5g20500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G20500	BRADI5G20500.1	BRADI5G20500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-27	93.8	277	314
E3 adaptor/Cullin RING/APC_C/CDC20	5.60e-122	407.3	142	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+ +v++l++  s+ +l+sG++D+ +++WD++   ++
   Q: 277  GHEQEVCGLKWsgSGQHLASGGNDNLLHIWDVSMASSV 314
           8**********97669***************9766655 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tg 94
           e+ ldap+l dd+ylnLldW+s+nvl++aLg++vylw+ ++g+ s+l  + e++  vtsvsw ++g ++avG +++ v+++D ++++ +rtl   
   Q: 142  ERTLDAPDLVDDYYLNLLDWGSSNVLSIALGNTVYLWDGSNGSTSELVTVdEDNGPVTSVSWAPDGRHIAVGLNSSIVQLWDPSSNRLLRTLrGV 236
           689***********************************************777889************************************555 PP
   S: 95   hsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.........Plkkfkehka 180
           h +rvg+L+Wn+++l++G+ dg+i+ +dvr++++ ++t+++h+qevCGlkw+ ++++LasGGnDn +++wd s  +          l++ ++h a
   Q: 237  HESRVGSLAWNNNILTTGGMDGKIVNNDVRIRNHAVQTYHGHEQEVCGLKWSGSGQHLASGGNDNLLHIWDVSMASsvqsagrtqWLHRLDDHLA 331
           999********************************************************************98877677788777788999**** PP
   S: 181  avkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslal 275
           avka+aw+P+q++lLasGGG +Drcik+wnt tga+l+++dtgsqvc llw k+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl ++ 
   Q: 332  AVKALAWCPFQSNLLASGGGGSDRCIKLWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHSSRVLFMTQ 426
           *********************************************************************************************** PP
   S: 276  spdgeaivtaagDetlrfwklfdk 299
           spdg ++++aa+Detlrfw++f +
   Q: 427  SPDGCTVASAAADETLRFWNVFGT 450
           **********************76 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDAGSNSISS EKSSRYAAPR SPLKEAGSRP YMPSLSTASR NPNAKCYGDR FIPNRSAMDM 60
DMAHYLLTEP KRDEKNVGTA SPSNEMYRKL LAEKLLNNRT RILAFQNKPP EPENILTELR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCAGATCG GTTACCGAGT TGATTTATTT ATCGGCCTGC GAATTCGTCG CGTGAATTAG 60
GGTTCCGTGT TGATTCCTGT TCGATTTCTT CTCTCTGAGT AAATCTTGTT CGCGTCAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

bdi:100831204

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cme-027234	Cyanidioschyzon merolae	46.81	6.00e-100	357.00
IUUC-Loc-052638	Lepisosteus oculatus	42.40	2.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence