iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099234

Ensembl Protein ID

POPTR_0016s06920.1

UniProt Accession

B9IIJ8; B9IIJ8_POPTR

Genbank Protein ID

EEF05139.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_256238; POPTR_0016s06920g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s06920	POPTR_0016s06920.1	POPTR_0016s06920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-24	86.3	305	344
E3 adaptor/Cullin RING/APC_C/CDC20	5.70e-124	414.4	122	429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           Ht+ v +la+   +++ll+sG+  +D  ik W++ tg++l
   Q: 305  HTAAVKALAWcpfQSNLLASGGggNDRHIKFWNTQTGTCL 344
           9***********8559****5555*************998 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 3    kvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl 92
             ldap++ ddfylnLldW+++nvla+aLg++vylw+a+++++s++  + ee+  vts+sw ++g +lavG ++++v+++D ++++ +rtl
   Q: 122  MTLDAPDIVDDFYLNLLDWGNNNVLAIALGTTVYLWNASNSSISEVVTVdEEDGPVTSISWAPDGRHLAVGLDNSNVQLWDSATNQMLRTL 212
           679*********************************************9666668************************************ PP
   S: 93   .tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......Plkkfk 176
             gh  rv++L+Wn+++l++G++d ++  +dvr++e+ ++ +++h+qevCGlkw+ ++++LasGGnDn + +wd    +       l+k +
   Q: 213  rGGHRLRVTSLAWNHHLLTTGGKDAKVINNDVRIREHIVESYEGHRQEVCGLKWSASGQQLASGGNDNLLFIWDRFMASsnsprhWLHKLE 303
           889***********************************************************************75544445443468999 PP
   S: 177  ehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkghe 267
           +h+aavka+aw+P+q++lLasGGG +Dr+ikfwnt+tg++l+++dtgsqvc l w k+++el+s+hGf+en+++lwkyps+ k+ael+gh+
   Q: 304  DHTAAVKALAWCPFQSNLLASGGGGNDRHIKFWNTQTGTCLNSVDTGSQVCALQWNKHERELLSSHGFTENQLILWKYPSMVKMAELSGHT 394
           ******************************************************************************************* PP
   S: 268  aRvlslalspdgeaivtaagDetlrfwklfdkkka 302
           + vl ++ spdg ++++aagDetlrfw++f + ka
   Q: 395  SPVLFMTQSPDGYTVASAAGDETLRFWNVFGNPKA 429
           ******************************87665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDSSSSSTTT RMFHPRSALR ENPQRKKSYE NLDRFIPNRS AMDMDFAHYM LTEGRKAKES 60
PPSQSLYQKL LAEAFNMNGR RILAFKNKPP TLVDPIPLFS SSSVHSSKPV KPQRHIPQRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCTT CTTCTTCTTC GACCACAACT AGAATGTTTC ATCCTCGAAG CGCACTTCGA 60
GAAAACCCTC AACGGAAAAA ATCGTATGAA AACGTGAGTC TACAAAACTA TATATGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

pop:POPTR_0016s06920g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024920	Choloepus hoffmanni	62.16	7.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence