iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121812

Ensembl Protein ID

EOX98408

UniProt Accession

A0A061E809; A0A061E809_THECC

Genbank Protein ID

EOX98408.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_007178

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_007178	EOX98408	EOX98408

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-12	48.2	521	549

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWDl 30
           sv +l++    +   l++Gsd+g++k++D+
   Q: 521  SVLGLCWlkkyP-SKLIAGSDNGSLKLYDI 549
           7999****9775.689*************6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAITIPALGS MYIESCRKHG VAPSSGFLSA LFKAEVKKSC HEVCILEILL DNVKDIDFHS 60
LLEVFMKISE SEIEAVDVLN ESSCALTGEY ALLLMRSIGQ KLRVVDLQDF SFGKDFLRDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATGTATTT TAACCTCTTA AAACTAAAAA AAAAATATTT TAAAAAAAGG AAAATGACTC 60
ACGCAGCGTC ATCTGAAAAG CTGAAAGTGG GGCCCAGTTG TGCGTTTAAT AGTAGTAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	56.20	0.00e+00	791.00
IUUC-Ath-007257	Arabidopsis thaliana	55.16	0.00e+00	787.00
IUUC-Bol-016080	Brassica oleracea	56.32	0.00e+00	857.00
IUUC-Bra-017152	Brassica rapa	56.69	0.00e+00	852.00
IUUC-Cme-027163	Cyanidioschyzon merolae	39.30	5.00e-70	258.00
IUUC-Gma-044343	Glycine max	65.65	0.00e+00	998.00
IUUC-Mtr-057634	Medicago truncatula	63.97	0.00e+00	991.00
IUUC-Ppa-095461	Physcomitrella patens	52.78	2.00e-147	516.00
IUUC-Pop-099267	Populus trichocarpa	68.46	0.00e+00	1080.00
IUUC-Ppe-101596	Prunus persica	72.55	0.00e+00	1022.00
IUUC-Smo-109318	Selaginella moellendorffii	52.05	2.00e-130	458.00
IUUC-Sly-111655	Solanum lycopersicum	63.29	0.00e+00	930.00
IUUC-Stu-111974	Solanum tuberosum	62.08	0.00e+00	921.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence