iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078207

Ensembl Protein ID

OGLUM05G09370.2

UniProt Accession

A0A0D9ZWB2; A0A0D9ZWB2_9ORYZ

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM05G09370	OGLUM05G09370.1	OGLUM05G09370.1
OGLUM05G09370	OGLUM05G09370.2	OGLUM05G09370.2
OGLUM05G09370	OGLUM05G09370.3	OGLUM05G09370.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-25	87.3	50	85
UBD/Beta-Prp	9.70e-41	141.0	6	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ v++++   d t+l++Gs D t k+WD+ tg 
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGA 85
           8***********777*****************9986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......... 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +          
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYSGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGAELFTfrfdaparsv 99
           489*******************************************************************************99********** PP
   S: 132  .........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtds 182
                                                    + sg +g +n +v+ p ++ +++++ D t+r+Wd +tg++l +   ++gh++ 
   Q: 100  efaigdglavittdnfmgnvptaqvkriaddpddqseesllVISGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGTCLMQSdnEQGHQKT 193
           **********************************************************************************99999555**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs.sD 243
           ++sls + +  ++++gsld++ klwd +t + ++t+    ++v+ v+ sp  +++v g+ +D
   Q: 194  ITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTE-RPVNAVDISPLLDHVVIGGgQD 254
           ***********************************9875.4566666665444444443144 PP

Organism

Oryza glumaepatula

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYSG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGAELFTF RFDAPARSVE FAIGDGLAVI TTDNFMGNVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCACTTTT AACCGTATCA AATTTTAGTA GGTAACATAT ACTAATCATG TCCTTAACAT 60
TTCTACCTTA CCAAAAGTAG ACAACTTCAA AGTTGCAAAA GTTTCCTATA AAAGCACTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	69.27	2.00e-65	241.00
IUUC-Aml-001321	Ailuropoda melanoleuca	46.60	4.00e-86	310.00
IUUC-Atr-002468	Amborella trichopoda	71.90	3.00e-96	343.00
IUUC-Apl-003841	Anas platyrhynchos	46.46	5.00e-87	313.00
IUUC-Aca-005123	Anolis carolinensis	46.46	8.00e-89	319.00
IUUC-Aly-005473	Arabidopsis lyrata	77.37	4.00e-151	526.00
IUUC-Ath-007094	Arabidopsis thaliana	76.76	1.00e-150	525.00
IUUC-Ago-008000	Ashbya gossypii	41.87	1.00e-72	266.00
IUUC-Acl-008098	Aspergillus clavatus	44.58	5.00e-80	290.00
IUUC-Afl-008494	Aspergillus flavus	45.87	3.00e-83	301.00
IUUC-Afu-009080	Aspergillus fumigatus	44.28	2.00e-79	288.00
IUUC-Ani-009230	Aspergillus nidulans	46.65	2.00e-83	301.00
IUUC-Aor-010114	Aspergillus oryzae	45.87	3.00e-83	301.00
IUUC-Ate-010285	Aspergillus terreus	45.12	2.00e-81	295.00
IUUC-Ame-011534	Astyanax mexicanus	46.04	6.00e-86	310.00
IUUC-Bgr-012121	Blumeria graminis	43.21	7.00e-76	276.00
IUUC-Bta-013143	Bos taurus	46.77	1.00e-86	312.00
IUUC-Bci-013950	Botrytis cinerea	46.48	5.00e-83	300.00
IUUC-Bdi-015019	Brachypodium distachyon	89.54	1.00e-174	605.00
IUUC-Bol-015709	Brassica oleracea	76.29	2.00e-150	525.00
IUUC-Bra-017760	Brassica rapa	76.29	7.00e-152	530.00
IUUC-Cel-018226	Caenorhabditis elegans	40.68	5.00e-73	267.00
IUUC-Cja-019741	Callithrix jacchus	46.46	1.00e-86	312.00
IUUC-Cfa-021204	Canis familiaris	46.30	9.00e-86	309.00
IUUC-Cpo-021661	Cavia porcellus	46.30	5.00e-86	310.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	51.69	2.00e-100	358.00
IUUC-Csa-024038	Chlorocebus sabaeus	46.46	1.00e-86	312.00
IUUC-Cin-025597	Ciona intestinalis	47.69	2.00e-89	321.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	45.43	7.00e-80	290.00
IUUC-Cne-026838	Cryptococcus neoformans	42.60	3.00e-79	288.00
IUUC-Cme-027304	Cyanidioschyzon merolae	52.78	6.00e-90	323.00
IUUC-Dre-028567	Danio rerio	45.54	2.00e-87	315.00
IUUC-Dno-029171	Dasypus novemcinctus	46.60	5.00e-86	311.00
IUUC-Dor-030257	Dipodomys ordii	32.95	3.00e-26	111.00
IUUC-Dse-031191	Dothistroma septosporum	43.41	1.00e-78	286.00
IUUC-Dme-031879	Drosophila melanogaster	48.30	4.00e-90	323.00
IUUC-Ete-032336	Echinops telfairi	39.81	6.00e-43	166.00
IUUC-Eca-033259	Equus caballus	46.30	1.00e-85	309.00
IUUC-Eeu-035153	Erinaceus europaeus	42.14	6.00e-26	110.00
IUUC-Fca-036489	Felis catus	46.30	1.00e-85	309.00
IUUC-Fal-037485	Ficedula albicollis	46.15	9.00e-87	312.00
IUUC-Fox-037860	Fusarium oxysporum	44.25	1.00e-79	288.00
IUUC-Fso-038188	Fusarium solani	45.00	8.00e-79	286.00
IUUC-Gmo-039311	Gadus morhua	45.06	6.00e-85	306.00
IUUC-Ggr-040045	Gaeumannomyces graminis	45.37	8.00e-80	290.00
IUUC-Gga-040645	Gallus gallus	45.65	1.00e-85	308.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.85	2.00e-84	305.00
IUUC-Gma-043930	Glycine max	82.15	1.00e-160	557.00
IUUC-Ggo-045578	Gorilla gorilla	46.46	1.00e-86	312.00
IUUC-Hsa-046734	Homo sapiens	46.46	1.00e-86	312.00
IUUC-Hvu-047553	Hordeum vulgare	89.54	8.00e-175	605.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	46.30	1.00e-85	309.00
IUUC-Kpa-049325	Komagataella pastoris	45.87	7.00e-81	293.00
IUUC-Lch-049620	Latimeria chalumnae	45.51	2.00e-78	284.00
IUUC-Lpe-051338	Leersia perrieri	94.53	6.00e-177	612.00
IUUC-Loc-052094	Lepisosteus oculatus	41.54	2.00e-73	268.00
IUUC-Lma-053047	Leptosphaeria maculans	47.24	4.00e-84	304.00
IUUC-Laf-053801	Loxodonta africana	46.54	2.00e-83	301.00
IUUC-Mcc-055498	Macaca mulatta	41.23	5.00e-67	247.00
IUUC-Meu-056729	Macropus eugenii	42.64	2.00e-77	281.00
IUUC-Mor-057025	Magnaporthe oryzae	44.58	1.00e-77	282.00
IUUC-Mpo-057511	Magnaporthe poae	46.71	3.00e-80	291.00
IUUC-Mtr-058051	Medicago truncatula	81.54	7.00e-160	555.00
IUUC-Mla-059061	Melampsora laricipopulina	44.48	1.00e-80	292.00
IUUC-Mga-059229	Meleagris gallopavo	45.87	2.00e-84	305.00
IUUC-Mvi-060399	Microbotryum violaceum	43.75	1.00e-77	282.00
IUUC-Mmr-060764	Microcebus murinus	46.77	3.00e-87	314.00
IUUC-Mdo-062088	Monodelphis domestica	45.71	1.00e-86	312.00
IUUC-Mmu-064304	Mus musculus	46.46	8.00e-87	313.00
IUUC-Mac-065520	Musa acuminata	82.19	4.00e-160	556.00
IUUC-Mpu-066340	Mustela putorius furo	46.30	1.00e-85	309.00
IUUC-Mlu-067111	Myotis lucifugus	46.46	1.00e-86	312.00
IUUC-Nfi-068478	Neosartorya fischeri	44.58	3.00e-80	291.00
IUUC-Ncr-068820	Neurospora crassa	46.46	5.00e-80	290.00
IUUC-Nle-069903	Nomascus leucogenys	46.30	1.00e-85	308.00
IUUC-Opr-070221	Ochotona princeps	45.54	6.00e-84	303.00
IUUC-Ont-071765	Oreochromis niloticus	46.15	1.00e-87	315.00
IUUC-Oan-073660	Ornithorhynchus anatinus	44.52	1.00e-72	266.00
IUUC-Ocu-074039	Oryctolagus cuniculus	46.30	6.00e-86	310.00
IUUC-Obr-076334	Oryza brachyantha	91.38	4.00e-176	609.00
IUUC-Ogl-077060	Oryza glaberrima	98.17	0.00e+00	643.00
IUUC-Oin-079878	Oryza indica	99.08	0.00e+00	665.00
IUUC-Olo-080677	Oryza longistaminata	83.38	2.00e-180	624.00
IUUC-Opu-083136	Oryza punctata	96.92	0.00e+00	652.00
IUUC-Oru-084916	Oryza rufipogon	95.81	0.00e+00	654.00
IUUC-Osa-085454	Oryza sativa	99.08	0.00e+00	665.00
IUUC-Ola-087053	Oryzias latipes	46.15	2.00e-86	311.00
IUUC-Olu-087602	Ostreococcus lucimarinus	60.43	6.00e-116	409.00
IUUC-Oga-088154	Otolemur garnettii	46.60	2.00e-86	311.00
IUUC-Oar-089915	Ovis aries	46.60	5.00e-86	310.00
IUUC-Ptr-091124	Pan troglodytes	36.96	3.00e-57	214.00
IUUC-Pan-092035	Papio anubis	46.46	1.00e-86	312.00
IUUC-Psi-094096	Pelodiscus sinensis	45.16	2.00e-53	201.00
IUUC-Pno-094988	Phaeosphaeria nodorum	44.00	3.00e-74	271.00
IUUC-Ppa-095536	Physcomitrella patens	75.38	9.00e-149	518.00
IUUC-Pfo-096101	Poecilia formosa	45.23	4.00e-86	310.00
IUUC-Pab-097726	Pongo abelii	46.46	1.00e-86	312.00
IUUC-Pop-099617	Populus trichocarpa	79.08	2.00e-156	543.00
IUUC-Pca-101014	Procavia capensis	46.77	5.00e-87	313.00
IUUC-Ppe-101320	Prunus persica	80.92	2.00e-158	550.00
IUUC-Pva-102789	Pteropus vampyrus	43.08	9.00e-76	276.00
IUUC-Pgr-103479	Puccinia graminis	44.17	3.00e-80	291.00
IUUC-Ptt-103981	Puccinia triticina	44.17	3.00e-81	294.00
IUUC-Pte-104278	Pyrenophora teres	44.91	2.00e-81	295.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	44.91	2.00e-81	295.00
IUUC-Rno-105867	Rattus norvegicus	42.42	1.00e-70	259.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.27	2.00e-73	268.00
IUUC-Sha-107039	Sarcophilus harrisii	45.71	1.00e-86	311.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.07	8.00e-82	296.00
IUUC-Spo-108314	Schizosaccharomyces pombe	45.90	1.00e-87	315.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	46.18	8.00e-83	299.00
IUUC-Smo-108728	Selaginella moellendorffii	71.69	5.00e-141	493.00
IUUC-Sit-110801	Setaria italica	90.15	1.00e-176	611.00
IUUC-Sly-111326	Solanum lycopersicum	78.46	8.00e-155	538.00
IUUC-Stu-112458	Solanum tuberosum	79.69	3.00e-156	543.00
IUUC-Sbi-114063	Sorghum bicolor	88.62	1.00e-174	604.00
IUUC-Sre-115096	Sporisorium reilianum	44.64	5.00e-77	280.00
IUUC-Ssc-116080	Sus scrofa	46.77	8.00e-87	313.00
IUUC-Tgu-116988	Taeniopygia guttata	46.30	1.00e-86	312.00
IUUC-Tru-118766	Takifugu rubripes	45.54	2.00e-86	311.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.85	6.00e-87	313.00
IUUC-Tca-121316	Theobroma cacao	82.15	9.00e-160	555.00
IUUC-Tre-122097	Trichoderma reesei	45.99	9.00e-80	289.00
IUUC-Tvi-122442	Trichoderma virens	45.40	6.00e-79	286.00
IUUC-Tae-125800	Triticum aestivum	89.23	3.00e-174	603.00
IUUC-Tur-126334	Triticum urartu	76.99	9.00e-149	518.00
IUUC-Tme-127038	Tuber melanosporum	45.87	2.00e-83	301.00
IUUC-Ttr-128659	Tursiops truncatus	43.38	2.00e-67	248.00
IUUC-Uma-129464	Ustilago maydis	44.64	7.00e-77	280.00
IUUC-Vda-129841	Verticillium dahliae	45.71	4.00e-79	287.00
IUUC-Vvi-131076	Vitis vinifera	80.31	1.00e-159	554.00
IUUC-Xtr-132395	Xenopus tropicalis	47.08	2.00e-88	318.00
IUUC-Xma-133383	Xiphophorus maculatus	45.23	5.00e-86	310.00
IUUC-Yli-134586	Yarrowia lipolytica	44.07	7.00e-69	253.00
IUUC-Zma-135904	Zea mays	89.23	4.00e-176	609.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence