iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111839

Ensembl Protein ID

Solyc12g040510.1.1

UniProt Accession

K4DEU5; K4DEU5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g040510.1	Solyc12g040510.1.1	Solyc12g040510.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-44	147.5	149	183
UBD/Beta-Prp	1.10e-54	186.3	12	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrt 32
           H+d+v+c++f  ++  +++vsGs+D t+k+W+l+ 
   Q: 149  HSDWVSCVRFspNNlqPTIVSGSWDRTVKIWNLSN 183
           ***********7556788**************976 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtl 90
           +++h++ +t+++  ++++++++t+srd++i+vw++t++        r+l gh  +v++v +s+dg + ++gs D+ +++wdl++g++ + +
   Q: 12   MKAHTDWVTAIATpIDNSDMIVTSSRDKSIIVWSLTKEGSqygvpRRRLTGHGHFVQDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRF 102
           5678888888888888888888888888888888888777788888888888888888888888888888888888888888888888888 PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpd 148
            gh+++vls++fs ++  +vs+s+d+ i++w++  + c ++   ++ h+++v+cv+++p+
   Q: 103  VGHTKDVLSVAFSVDNRQIVSASRDKSIKLWNTLGE-CKYTiqDQDSHSDWVSCVRFSPN 161
           888888888888888888888888888888866433.33332356678888888888876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS IIVWSLTKEG SQYGVPRRRL 60
TGHGHFVQDV VLSSDGMFAL SGSWDGELRL WDLQAGTTAR RFVGHTKDVL SVAFSVDNRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCAAG AATCACTGGT CCTCCGCGGC ACAATGAAGG CCCATACAGA TTGGGTGACA 60
GCCATTGCCA CTCCGATTGA TAACTCCGAC ATGATTGTCA CATCGTCTCG TGACAAATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101245737

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007720	Ashbya gossypii	48.48	4.00e-89	320.00
IUUC-Ame-011199	Astyanax mexicanus	66.56	1.00e-126	445.00
IUUC-Cel-018335	Caenorhabditis elegans	58.73	1.00e-100	358.00
IUUC-Cne-026930	Cryptococcus neoformans	62.85	2.00e-120	424.00
IUUC-Cme-027251	Cyanidioschyzon merolae	57.28	1.00e-110	392.00
IUUC-Ete-033182	Echinops telfairi	59.66	7.00e-76	276.00
IUUC-Eca-033296	Equus caballus	72.37	4.00e-61	225.00
IUUC-Mla-058909	Melampsora laricipopulina	63.16	3.00e-121	426.00
IUUC-Ont-072287	Oreochromis niloticus	66.56	2.00e-126	444.00
IUUC-Ola-086400	Oryzias latipes	66.25	5.00e-126	442.00
IUUC-Pfo-097311	Poecilia formosa	65.94	2.00e-125	441.00
IUUC-Ptt-103839	Puccinia triticina	64.40	5.00e-122	429.00
IUUC-Stu-112180	Solanum tuberosum	99.70	0.00e+00	667.00
IUUC-Vpa-130410	Vicugna pacos	56.59	7.00e-78	282.00
IUUC-Vvi-131115	Vitis vinifera	86.81	6.00e-166	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence