iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pno-094794

Ensembl Protein ID

SNOT_06808

UniProt Accession

Q0UN56; ERB1_PHANO

Genbank Protein ID

EAT85459.2

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CH445334

Gene Name

ERB1; SNOG_06808

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SNOG_06808	SNOT_06808	SNOT_06808

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-11	43.6	400	419

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 16   lvsGsdDgtikvWDlrtgvl 35
           ++sG+dDg +++W+l tg++
   Q: 400  VASGGDDGYVRIWELLTGRQ 419
           79*************99987 PP

Organism

Phaeosphaeria nodorum

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MSVNSRKRKV ATKAAPVQSS SDEELADGLL DGILSHSEDE SEDDQDAEDT DASSVIEGLS 60
DEDFEDEEDS GDEAEEIRKQ MRNLNTSGGS QQRKTRQPAH ERLDDGADGE LEGEEDESLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTTA ATTCGCGCAA GAGGAAGGTA GCGACAAAGG CTGCGCCTGT ACAGAGCAGC 60
TCGGATGAAG AACTGGCGGA TGGTCTGCTC GATGGCATCT TGTCGCATTC GGAAGACGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pno:SNOG_06808

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	34.70	2.00e-89	321.00
IUUC-Aml-001507	Ailuropoda melanoleuca	37.66	4.00e-107	380.00
IUUC-Atr-003141	Amborella trichopoda	32.65	2.00e-56	211.00
IUUC-Apl-003545	Anas platyrhynchos	43.20	1.00e-55	209.00
IUUC-Aly-005649	Arabidopsis lyrata	38.58	1.00e-117	416.00
IUUC-Ath-007625	Arabidopsis thaliana	38.74	2.00e-110	391.00
IUUC-Ago-007958	Ashbya gossypii	49.18	0.00e+00	659.00
IUUC-Acl-008344	Aspergillus clavatus	60.41	0.00e+00	808.00
IUUC-Afl-008616	Aspergillus flavus	60.86	0.00e+00	827.00
IUUC-Afu-009083	Aspergillus fumigatus	60.56	0.00e+00	786.00
IUUC-Ani-009365	Aspergillus nidulans	60.21	0.00e+00	813.00
IUUC-Ang-009796	Aspergillus niger	61.71	0.00e+00	833.00
IUUC-Aor-010015	Aspergillus oryzae	60.86	0.00e+00	827.00
IUUC-Ate-010537	Aspergillus terreus	61.36	0.00e+00	849.00
IUUC-Ame-011767	Astyanax mexicanus	50.42	4.00e-68	249.00
IUUC-Bgr-012286	Blumeria graminis	64.56	0.00e+00	900.00
IUUC-Bta-013569	Bos taurus	39.34	1.00e-117	415.00
IUUC-Bci-013820	Botrytis cinerea	66.97	0.00e+00	869.00
IUUC-Bdi-014477	Brachypodium distachyon	38.35	2.00e-118	417.00
IUUC-Bol-016099	Brassica oleracea	38.43	4.00e-118	416.00
IUUC-Bra-017174	Brassica rapa	38.84	4.00e-119	421.00
IUUC-Cel-018201	Caenorhabditis elegans	35.00	1.00e-104	372.00
IUUC-Cja-019009	Callithrix jacchus	36.59	2.00e-62	232.00
IUUC-Cfa-020173	Canis familiaris	40.58	3.00e-125	440.00
IUUC-Cpo-021796	Cavia porcellus	39.02	1.00e-117	415.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	37.98	1.00e-107	382.00
IUUC-Csa-023440	Chlorocebus sabaeus	39.02	4.00e-124	437.00
IUUC-Cin-025782	Ciona intestinalis	39.75	9.00e-133	466.00
IUUC-Csv-026352	Ciona savignyi	37.73	3.00e-122	430.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	56.29	0.00e+00	694.00
IUUC-Cne-027004	Cryptococcus neoformans	44.91	7.00e-165	572.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.16	2.00e-64	238.00
IUUC-Dre-028658	Danio rerio	40.16	5.00e-134	469.00
IUUC-Dno-028883	Dasypus novemcinctus	39.65	2.00e-120	424.00
IUUC-Dor-031031	Dipodomys ordii	39.22	6.00e-124	436.00
IUUC-Dse-031443	Dothistroma septosporum	58.31	0.00e+00	766.00
IUUC-Dme-031786	Drosophila melanogaster	37.85	4.00e-127	446.00
IUUC-Eca-033677	Equus caballus	38.92	5.00e-120	423.00
IUUC-Eeu-035310	Erinaceus europaeus	34.50	1.00e-83	301.00
IUUC-Fca-035888	Felis catus	38.23	1.00e-118	418.00
IUUC-Fal-037438	Ficedula albicollis	37.52	2.00e-93	334.00
IUUC-Fox-037973	Fusarium oxysporum	56.49	0.00e+00	850.00
IUUC-Fso-038187	Fusarium solani	62.72	0.00e+00	852.00
IUUC-Gmo-039114	Gadus morhua	37.42	8.00e-114	402.00
IUUC-Ggr-039746	Gaeumannomyces graminis	61.88	0.00e+00	857.00
IUUC-Gga-040631	Gallus gallus	40.52	2.00e-75	273.00
IUUC-Gac-042582	Gasterosteus aculeatus	40.19	5.00e-133	466.00
IUUC-Gma-044215	Glycine max	39.81	8.00e-119	419.00
IUUC-Ggo-045587	Gorilla gorilla	39.18	2.00e-124	437.00
IUUC-Hsa-046319	Homo sapiens	39.02	3.00e-124	437.00
IUUC-Hvu-047526	Hordeum vulgare	37.68	9.00e-107	379.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	38.96	3.00e-120	424.00
IUUC-Kpa-049221	Komagataella pastoris	45.28	5.00e-175	606.00
IUUC-Lch-049640	Latimeria chalumnae	40.16	3.00e-133	467.00
IUUC-Lpe-051135	Leersia perrieri	34.49	1.00e-50	192.00
IUUC-Loc-051930	Lepisosteus oculatus	39.72	5.00e-132	462.00
IUUC-Lma-053290	Leptosphaeria maculans	77.44	0.00e+00	1181.00
IUUC-Laf-053903	Loxodonta africana	36.18	2.00e-102	364.00
IUUC-Mcc-055471	Macaca mulatta	38.86	5.00e-124	436.00
IUUC-Meu-056190	Macropus eugenii	39.72	8.00e-123	432.00
IUUC-Mor-057135	Magnaporthe oryzae	58.22	0.00e+00	864.00
IUUC-Mpo-057475	Magnaporthe poae	60.84	0.00e+00	806.00
IUUC-Mtr-058689	Medicago truncatula	36.10	3.00e-110	390.00
IUUC-Mla-059149	Melampsora laricipopulina	43.82	2.00e-153	534.00
IUUC-Mga-059645	Meleagris gallopavo	36.82	7.00e-45	171.00
IUUC-Mvi-060485	Microbotryum violaceum	44.07	3.00e-142	498.00
IUUC-Mmr-061674	Microcebus murinus	39.34	2.00e-126	444.00
IUUC-Mdo-062973	Monodelphis domestica	39.40	3.00e-128	451.00
IUUC-Mmu-064180	Mus musculus	40.13	1.00e-126	445.00
IUUC-Mac-064535	Musa acuminata	34.24	1.00e-60	226.00
IUUC-Mpu-066406	Mustela putorius furo	38.86	2.00e-122	431.00
IUUC-Mlu-067795	Myotis lucifugus	39.49	6.00e-113	399.00
IUUC-Nfi-068516	Neosartorya fischeri	59.53	0.00e+00	759.00
IUUC-Ncr-068767	Neurospora crassa	62.01	0.00e+00	808.00
IUUC-Opr-071084	Ochotona princeps	31.53	6.00e-32	129.00
IUUC-Ont-071614	Oreochromis niloticus	40.41	5.00e-132	462.00
IUUC-Oba-075980	Oryza barthii	34.20	7.00e-51	193.00
IUUC-Obr-076799	Oryza brachyantha	38.55	5.00e-112	396.00
IUUC-Ogl-077134	Oryza glaberrima	37.91	1.00e-110	392.00
IUUC-Ogu-078655	Oryza glumaepatula	36.18	4.00e-102	363.00
IUUC-Oin-079654	Oryza indica	37.91	2.00e-110	391.00
IUUC-Olo-080706	Oryza longistaminata	35.07	4.00e-51	194.00
IUUC-Ome-081716	Oryza meridionalis	34.78	3.00e-51	194.00
IUUC-Oni-082508	Oryza nivara	34.91	7.00e-97	346.00
IUUC-Opu-083707	Oryza punctata	35.07	5.00e-51	194.00
IUUC-Oru-084453	Oryza rufipogon	35.07	4.00e-51	194.00
IUUC-Osa-085811	Oryza sativa	37.76	3.00e-110	390.00
IUUC-Ola-087361	Oryzias latipes	41.61	2.00e-137	481.00
IUUC-Oga-088015	Otolemur garnettii	39.02	1.00e-125	442.00
IUUC-Oar-090058	Ovis aries	50.60	1.00e-48	185.00
IUUC-Ptr-090631	Pan troglodytes	44.13	7.00e-58	215.00
IUUC-Pan-092306	Papio anubis	38.96	4.00e-123	433.00
IUUC-Pma-094622	Petromyzon marinus	40.19	2.00e-135	474.00
IUUC-Ppa-095528	Physcomitrella patens	32.46	5.00e-57	213.00
IUUC-Pfo-096682	Poecilia formosa	39.47	3.00e-133	467.00
IUUC-Pab-097939	Pongo abelii	38.62	2.00e-108	384.00
IUUC-Pop-099043	Populus trichocarpa	38.90	4.00e-106	377.00
IUUC-Pca-100333	Procavia capensis	36.77	9.00e-111	392.00
IUUC-Ppe-102078	Prunus persica	38.99	4.00e-112	396.00
IUUC-Pgr-103525	Puccinia graminis	44.36	9.00e-152	529.00
IUUC-Ptt-103929	Puccinia triticina	44.01	4.00e-146	510.00
IUUC-Pte-104029	Pyrenophora teres	80.74	0.00e+00	1195.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	78.95	0.00e+00	1198.00
IUUC-Rno-105248	Rattus norvegicus	39.87	3.00e-126	443.00
IUUC-Sce-106381	Saccharomyces cerevisiae	48.16	0.00e+00	650.00
IUUC-Sha-106519	Sarcophilus harrisii	40.03	4.00e-130	456.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	40.28	6.00e-136	476.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.18	2.00e-135	474.00
IUUC-Smo-109604	Selaginella moellendorffii	37.46	5.00e-102	363.00
IUUC-Sit-110551	Setaria italica	38.23	7.00e-115	406.00
IUUC-Sly-110970	Solanum lycopersicum	38.26	8.00e-52	196.00
IUUC-Stu-112593	Solanum tuberosum	40.00	1.00e-118	418.00
IUUC-Sar-113123	Sorex araneus	47.93	1.00e-60	224.00
IUUC-Sbi-113945	Sorghum bicolor	37.70	6.00e-117	412.00
IUUC-Sre-115188	Sporisorium reilianum	40.76	3.00e-142	497.00
IUUC-Ssc-115352	Sus scrofa	39.02	1.00e-121	428.00
IUUC-Tru-117685	Takifugu rubripes	40.25	1.00e-132	465.00
IUUC-Tni-119982	Tetraodon nigroviridis	40.19	6.00e-128	449.00
IUUC-Tca-121664	Theobroma cacao	38.79	3.00e-115	407.00
IUUC-Tre-122229	Trichoderma reesei	61.87	0.00e+00	780.00
IUUC-Tvi-122576	Trichoderma virens	60.78	0.00e+00	759.00
IUUC-Tae-124110	Triticum aestivum	36.97	2.00e-104	371.00
IUUC-Tur-126781	Triticum urartu	34.66	5.00e-89	320.00
IUUC-Tme-127080	Tuber melanosporum	59.88	0.00e+00	792.00
IUUC-Ttr-128514	Tursiops truncatus	34.07	2.00e-63	235.00
IUUC-Uma-129556	Ustilago maydis	41.40	5.00e-141	493.00
IUUC-Vda-129715	Verticillium dahliae	61.77	0.00e+00	855.00
IUUC-Vvi-131211	Vitis vinifera	37.74	2.00e-105	374.00
IUUC-Xma-133883	Xiphophorus maculatus	39.50	5.00e-129	453.00
IUUC-Yli-134438	Yarrowia lipolytica	49.56	0.00e+00	665.00
IUUC-Zma-135341	Zea mays	34.10	1.00e-106	379.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence