iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017770

Ensembl Protein ID

Bra018757.1-P

UniProt Accession

M4DQG4; M4DQG4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018757	Bra018757.1	Bra018757.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.30e-28	99.1	111	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k LLdltc++Vadmikgk+peeiR+  nienDftpeEea++R EnqWA
   Q: 111  KDLLDLTCQAVADMIKGKSPEEIRAQLNIENDFTPEEEAQIRAENQWA 158
           78*********************************************9 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSASRHIVLK SSDGETFEVE EAVALQSQTI AHMVEDDCID GGIPLANITG VILAKVIEYC 60
KKHVTVVPDG DGNSSSSLEE ELKNWDAEFL SNIDQSTLFH LIMAANFLNI KDLLDLTCQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCGT CCAGACATAT TGTGTTGAAA AGCTCCGATG GTGAGACCTT TGAGGTTGAA 60
GAAGCAGTGG CTCTCCAGTC CCAAACCATA GCTCACATGG TTGAAGATGA CTGCATCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015959	Brassica oleracea	93.75	3.00e-81	293.00
IUUC-Cme-027174	Cyanidioschyzon merolae	51.57	2.00e-38	150.00
IUUC-Ogu-077993	Oryza glumaepatula	55.62	9.00e-50	188.00
IUUC-Olo-080619	Oryza longistaminata	56.88	3.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence