iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058772

Ensembl Protein ID

AES87707

UniProt Accession

G7JN70; G7JN70_MEDTR

Genbank Protein ID

AES87707.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g032450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g032450	AES87707	AES87707

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	6.20e-26	91.8	125	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmik.gktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltck Vadm+   ktpe iR+tFni+nD++peEe+k+R EnqWA
   Q: 125  KSLLDLTCKSVADMMLaAKTPEAIRETFNIKNDYSPEEEQKIRSENQWA 173
           89***********98669******************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSSKEHHPE SLATKEDLLD SSAKKITLKS YDGETFDIEE AVALESQTIK HLIDDVSDDT 60
GIPIPNVTGK ILAKVIEYCK KHVEYARSNE KPPEDELKKW DAEFVQVDQE TLFDLILAAN 120

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Nucleotide Sequence
(Fasta)

ATGTCATCAT CCAAAGAACA TCATCCTGAA TCATTGGCGA CCAAAGAAGA TCTCCTTGAC 60
TCATCTGCGA AGAAGATCAC CCTCAAGAGT TATGACGGTG AAACCTTTGA TATCGAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_4g032450

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence