iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017130

Ensembl Protein ID

Bra003525.1-P

UniProt Accession

M4CH42; M4CH42_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003525	Bra003525.1	Bra003525.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-24	85.5	121	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           H+++v++l+f    + +ll+sG+dDg i +WDl++ 
   Q: 121  HKGPVRGLEFnaitP-NLLASGADDGEICIWDLTKP 155
           99**********955.9***************9976 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MACIKGVDRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAS LEIFKLDFQS DDRDLPLVGE 60
IPCSERFHRL AWGRNGSGSD EFSLGLIAGG LGDGNIDLWN PLSLTSPQSS VNALVGHLSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTGCA TCAAGGGGGT GGACAGATCC GCCTCCGTCG CGCTGGCTCC CGACGCTCCT 60
TACATGGCAG CCGGAACCAT GGCGGGAGCC GTGGATCTAT CCTTTAGCTC TTCCGCCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024298--ACE1_Sec16_Sec31
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12931--Sec16_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002489	Amborella trichopoda	73.00	7.00e-152	529.00
IUUC-Aca-005195	Anolis carolinensis	32.81	6.00e-121	428.00
IUUC-Bol-015890	Brassica oleracea	96.84	0.00e+00	2006.00
IUUC-Cne-027066	Cryptococcus neoformans	33.33	2.00e-77	284.00
IUUC-Cme-027190	Cyanidioschyzon merolae	34.41	3.00e-62	233.00
IUUC-Dme-032137	Drosophila melanogaster	28.99	1.00e-97	351.00
IUUC-Eeu-035236	Erinaceus europaeus	33.96	1.00e-104	374.00
IUUC-Gmo-039663	Gadus morhua	33.73	2.00e-126	446.00
IUUC-Gac-042070	Gasterosteus aculeatus	33.45	8.00e-128	451.00
IUUC-Lch-050180	Latimeria chalumnae	35.19	7.00e-131	461.00
IUUC-Meu-056623	Macropus eugenii	38.59	5.00e-56	213.00
IUUC-Mla-059047	Melampsora laricipopulina	34.09	2.00e-78	288.00
IUUC-Mga-060086	Meleagris gallopavo	33.67	7.00e-127	448.00
IUUC-Mmu-063627	Mus musculus	33.52	1.00e-123	437.00
IUUC-Ont-072481	Oreochromis niloticus	34.29	3.00e-125	443.00
IUUC-Ola-086837	Oryzias latipes	34.60	7.00e-129	454.00
IUUC-Pma-094185	Petromyzon marinus	34.77	1.00e-119	423.00
IUUC-Ppa-095535	Physcomitrella patens	45.49	0.00e+00	929.00
IUUC-Pfo-096678	Poecilia formosa	34.29	7.00e-128	451.00
IUUC-Pgr-103294	Puccinia graminis	33.21	4.00e-82	300.00
IUUC-Ptt-103927	Puccinia triticina	29.66	5.00e-63	236.00
IUUC-Sce-106253	Saccharomyces cerevisiae	23.50	1.00e-61	231.00
IUUC-Smo-108889	Selaginella moellendorffii	44.58	2.00e-171	596.00
IUUC-Sre-114994	Sporisorium reilianum	30.53	3.00e-105	376.00
IUUC-Tni-120103	Tetraodon nigroviridis	34.13	3.00e-126	446.00
IUUC-Tbe-127257	Tupaia belangeri	38.69	2.00e-67	250.00
IUUC-Uma-129418	Ustilago maydis	35.32	1.00e-80	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence