iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016729

Ensembl Protein ID

Bra021188.1-P

UniProt Accession

M4DXE2; M4DXE2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra021188	Bra021188.1	Bra021188.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-41	139.3	185	223
UBD/Beta-Prp	6.70e-70	236.6	236	430

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+++af  s++ +++Gs D tikvWD+ +gvl +
   Q: 185  GHLGWVRSVAFdsSNDWFCTGSADRTIKVWDVASGVLKH 223
           8***********65599******************9987 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           ++s++ s+++++++d+ +k wd+++ k++rs+ gh ++v+++ ++p+ ++ +tg++D + +vwd++t  ++ +l+gh+++v+s+   p++  +v+G
   Q: 236  AVSNQHSYIFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALQPTLDVVLTGGRDSVCRVWDIRTKVQTFALSGHDKDVCSVFTRPTDPQVVTG 331
           57899******************************************************************************************* PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
           shd+ti+ wdl+ g  +  tl++h+++v+ +v+hp++n +vs+s D++ + ++l+ g+  + + +++   ++ ++++++g  +v+g+++g++ +wd
   Q: 332  SHDSTIKFWDLRYGRTMA-TLTNHKKAVRAMVLHPKENAFVSASVDNI-KKFSLPKGEFRHNMLSQQRATINAVAVNEDG-VMVTGGDNGSLWFWD 424
           *****************9.***************************95.55************999************98.99************* PP
   S: 209  lqtgec 214
            ++g+ 
   Q: 425  WKSGHS 430
           **9975 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTTEIEPQSL QKLSHKSVKR ALDLFSPARD QLAPPDPESK KVRLSHKIQV AFGGVEPVSK 60
QHIRKAEHNN EQIAPSNALP GEKVSTFLVV YCSKVSNFYC LMNSSRSRRS QGSSKGLAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACGG AGATCGAGCC ACAGTCACTG CAAAAGCTGA GTCACAAATC AGTGAAGCGA 60
GCTCTTGATC TTTTCTCCCC CGCTCGTGAT CAACTCGCTC CGCCTGATCC AGAAAGGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016396	Brassica oleracea	84.60	0.00e+00	851.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence