• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006884
Ensembl Protein ID AT5G24520.3
UniProt Accession Q9XGN1; Q5PP66; Q9FT87; TTG1_ARATH
Genbank Protein ID CAB45372.1; CAC10523.1; CAC10524.1; BAB11204.1; AED93319.1; AED93320.1; AED93321.1; ANM69758.1; AAV74225.1; AAW39014.1; BAE99249.1
Protein Name Protein TRANSPARENT TESTA GLABRA 1
Genbank Nucleotide ID AJ133743; AJ251522; AJ251523; AB010068; CP002688; CP002688; CP002688; CP002688; BT020231; BT020513; AK227211
Gene Name TTG1; At5g24520; K18P6_4; T31K7.8
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G24520 AT5G24520.3 AT5G24520.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINTMentha
Post-translational Modifications (PTMs)
UniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.90e-17 61.3 174 205
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 174  HDKEVHDIAWGEaRVFASVSADGSVRIFDLRD 205
           8899******55689**************987 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydroflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.
 May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydroflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.
Protein Sequence
(Fasta)
MDNSAPDSLS RSETAVTYDS PYPLYAMAFS SLRSSSGHRI AVGSFLEDYN NRIDILSFDS 60
DSMTVKPLPN LSFEHPYPPT KLMFSPPSLR RPSSGDLLAS SGDFLRLWEI NEDSSTVEPI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006884|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTGATTATT TCTCCGTCTC TTGAAAAATC CGACTGACAC TGACCTCAAA ACTCTCCTCT 60
CACTTTCGTC GTGAAGAAGC CAAATCTCGA ATCGAATCAG CACCACACAT TTCCATGGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006884|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0217--Developmental protein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0045165--P:cell fate commitment
GO:0009957--P:epidermal cell fate specification
GO:0007275--P:multicellular organism development
GO:0032880--P:regulation of protein localization
GO:0009733--P:response to auxin
GO:0009723--P:response to ethylene
GO:0010026--P:trichome differentiation
KEGG ath:AT5G24520
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000420 Aegilops tauschii 63.64 5.00e-37 144.00
IUUC-Aly-006211 Arabidopsis lyrata 99.12 0.00e+00 694.00
IUUC-Acl-008299 Aspergillus clavatus 35.07 8.00e-47 181.00
IUUC-Afl-008470 Aspergillus flavus 34.17 9.00e-43 167.00
IUUC-Afu-008896 Aspergillus fumigatus 36.03 5.00e-44 171.00
IUUC-Ani-009375 Aspergillus nidulans 35.32 4.00e-44 172.00
IUUC-Ang-009687 Aspergillus niger 34.79 3.00e-49 188.00
IUUC-Aor-010198 Aspergillus oryzae 33.75 4.00e-42 165.00
IUUC-Ate-010363 Aspergillus terreus 40.53 7.00e-39 154.00
IUUC-Bgr-012055 Blumeria graminis 35.85 6.00e-48 184.00
IUUC-Bci-013840 Botrytis cinerea 36.52 8.00e-51 194.00
IUUC-Bdi-014944 Brachypodium distachyon 62.72 3.00e-123 434.00
IUUC-Bol-015620 Brassica oleracea 92.38 2.00e-178 617.00
IUUC-Bra-017045 Brassica rapa 92.96 7.00e-179 619.00
IUUC-Cgl-026588 Colletotrichum gloeosporioides 36.36 2.00e-50 192.00
IUUC-Cne-026871 Cryptococcus neoformans 32.29 2.00e-47 182.00
IUUC-Cme-027345 Cyanidioschyzon merolae 37.35 1.00e-54 206.00
IUUC-Dse-031207 Dothistroma septosporum 37.31 2.00e-41 163.00
IUUC-Fox-037852 Fusarium oxysporum 37.53 8.00e-52 197.00
IUUC-Fso-038173 Fusarium solani 36.43 1.00e-51 196.00
IUUC-Ggr-040072 Gaeumannomyces graminis 36.75 3.00e-49 188.00
IUUC-Gma-043012 Glycine max 76.25 3.00e-155 540.00
IUUC-Hvu-047639 Hordeum vulgare 62.94 5.00e-119 420.00
IUUC-Kpa-049347 Komagataella pastoris 32.01 4.00e-46 178.00
IUUC-Lpe-051336 Leersia perrieri 64.01 4.00e-122 430.00
IUUC-Lma-053005 Leptosphaeria maculans 39.94 2.00e-45 176.00
IUUC-Meu-056685 Macropus eugenii 46.15 1.00e-69 255.00
IUUC-Mor-057075 Magnaporthe oryzae 36.25 3.00e-44 171.00
IUUC-Mpo-057336 Magnaporthe poae 36.32 3.00e-48 185.00
IUUC-Mtr-058793 Medicago truncatula 78.84 1.00e-160 558.00
IUUC-Mla-058866 Melampsora laricipopulina 32.37 7.00e-49 187.00
IUUC-Mvi-060379 Microbotryum violaceum 36.52 3.00e-42 166.00
IUUC-Mac-065344 Musa acuminata 60.78 8.00e-112 395.00
IUUC-Nfi-068302 Neosartorya fischeri 35.24 7.00e-44 171.00
IUUC-Ncr-068642 Neurospora crassa 37.22 7.00e-50 191.00
IUUC-Oba-075455 Oryza barthii 61.42 5.00e-113 399.00
IUUC-Obr-076064 Oryza brachyantha 63.74 9.00e-116 409.00
IUUC-Ogl-077224 Oryza glaberrima 61.42 5.00e-113 399.00
IUUC-Ogu-078639 Oryza glumaepatula 61.13 5.00e-112 396.00
IUUC-Oin-080194 Oryza indica 61.42 7.00e-113 399.00
IUUC-Olo-080234 Oryza longistaminata 61.13 2.00e-112 398.00
IUUC-Oni-082021 Oryza nivara 61.42 7.00e-113 399.00
IUUC-Opu-083903 Oryza punctata 60.18 8.00e-113 399.00
IUUC-Oru-084738 Oryza rufipogon 61.42 5.00e-113 399.00
IUUC-Osa-085445 Oryza sativa 61.42 5.00e-113 399.00
IUUC-Pno-094967 Phaeosphaeria nodorum 39.47 1.00e-45 177.00
IUUC-Pop-099260 Populus trichocarpa 81.34 3.00e-166 577.00
IUUC-Ppe-101664 Prunus persica 81.10 5.00e-167 579.00
IUUC-Pte-104094 Pyrenophora teres 40.47 8.00e-46 177.00
IUUC-Pyt-104726 Pyrenophora triticirepentis 41.06 1.00e-45 177.00
IUUC-Sce-106252 Saccharomyces cerevisiae 31.49 2.00e-43 169.00
IUUC-Sja-107768 Schizosaccharomyces japonicus 38.54 1.00e-49 189.00
IUUC-Spo-108014 Schizosaccharomyces pombe 36.99 1.00e-48 186.00
IUUC-Ssl-108466 Sclerotinia sclerotiorum 36.52 2.00e-50 193.00
IUUC-Sly-111838 Solanum lycopersicum 77.33 2.00e-162 564.00
IUUC-Stu-112456 Solanum tuberosum 77.33 5.00e-162 562.00
IUUC-Sar-113705 Sorex araneus 45.09 8.00e-70 256.00
IUUC-Sbi-113984 Sorghum bicolor 63.76 1.00e-102 365.00
IUUC-Sre-114968 Sporisorium reilianum 38.50 3.00e-54 205.00
IUUC-Tca-121493 Theobroma cacao 80.00 7.00e-158 548.00
IUUC-Tre-121987 Trichoderma reesei 37.17 2.00e-52 199.00
IUUC-Tvi-122586 Trichoderma virens 37.41 1.00e-52 200.00
IUUC-Tae-125936 Triticum aestivum 63.24 2.00e-119 421.00
IUUC-Tme-126973 Tuber melanosporum 39.11 2.00e-44 173.00
IUUC-Uma-129362 Ustilago maydis 39.84 2.00e-55 209.00
IUUC-Vda-130025 Verticillium dahliae 38.59 6.00e-49 187.00
IUUC-Vvi-131483 Vitis vinifera 75.95 7.00e-157 545.00
IUUC-Yli-134419 Yarrowia lipolytica 39.54 4.00e-59 221.00
IUUC-Zma-135276 Zea mays 63.13 2.00e-119 421.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved