iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058700

Ensembl Protein ID

AES80059

UniProt Accession

A2Q5D0; A2Q5D0_MEDTR

Genbank Protein ID

ABN08830.1; AES80059.1

Protein Name

Periodic tryptophan protein; Periodic tryptophan protein-associated region; WD40-like

Genbank Nucleotide ID

AC160924; CM001223

Gene Name

MTR_7g076230; MtrDRAFT_AC160924g14v1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g076230	AES80059	AES80059

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-33	113.0	538	573
UBD/Beta-Prp	2.70e-75	254.7	372	583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v  + f +d + l++++ Dg+i+ WD+ +g l
   Q: 538  HTHDVLTVVFrPDgKQLACSTLDGQIYFWDPVDGLL 573
           999********999****************999876 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlslsfspsgdklvsG 112
           ++cv++s+d++llatg +d+++kvw v++g ++ ++s+h+++vta+ f  + + l+++s D+ti+ wdl  +  ++t++   +++ +sl+ ++sg+++ +G
   Q: 372  VNCVAYSQDSQLLATGADDNKVKVWTVSSGFCFVTFSEHTNAVTALHFMASNNCLLSASLDGTIRAWDLVRYRNFRTFTtPSSRQFVSLAADQSGEVICAG 472
           5799***********************************************9****************9999999999956788999************** PP
   S: 113  shdrt.irvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           ++d+  i vw ++tg  l  +lsgh++ v ++v++p++ +l+s+s D+tvrlWd+  gk  ++t+   ht++v  + f+++gk+l+   ldg++ +wd   
   Q: 473  TSDSFeIFVWSMRTGRLLD-VLSGHEAPVHGLVFSPTNAVLASSSWDKTVRLWDVFDGKgAVETWP--HTHDVLTVVFRPDGKQLACSTLDGQIYFWDPVD 570
           999965999*********8.***********************************65552788883..9******************************** PP
   S: 212  gecvrtlnghtdn 224
           g  ++t +g +d 
   Q: 571  GLLMYTIEGSRDI 583
           **99999999864 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNFRFQNLLG APYRGGNAVI SNNTLLLSPV GNRVSVTDLR KSQTTTLPIQ SSSNISRIAV 60
SPDGTFLLAI DENNRCLFIN LRRRALLHRI TFKHRVGAVK FSPDGKLIAV AAGKLVQIWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACAAACGG TGCGTTTTGA TTCGCTTTCC ATTTCATCCC TACCCCTAAA CCCTAACATC 60
ATAAACCTCC ATTCCCGCCA CACACAAGCT AAACCCTAAA ACACCACAAC ACACGGTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

KEGG

mtr:MTR_7g076230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	41.28	0.00e+00	701.00
IUUC-Atr-003033	Amborella trichopoda	64.69	0.00e+00	1169.00
IUUC-Apl-003219	Anas platyrhynchos	41.59	0.00e+00	707.00
IUUC-Aca-004950	Anolis carolinensis	41.58	0.00e+00	711.00
IUUC-Aly-006213	Arabidopsis lyrata	72.45	0.00e+00	1303.00
IUUC-Ath-006593	Arabidopsis thaliana	71.60	0.00e+00	1303.00
IUUC-Ago-007916	Ashbya gossypii	41.68	0.00e+00	689.00
IUUC-Acl-008225	Aspergillus clavatus	43.17	0.00e+00	742.00
IUUC-Afl-008390	Aspergillus flavus	43.02	0.00e+00	753.00
IUUC-Afu-009039	Aspergillus fumigatus	43.70	0.00e+00	747.00
IUUC-Ani-009228	Aspergillus nidulans	40.58	0.00e+00	650.00
IUUC-Ang-009663	Aspergillus niger	42.24	0.00e+00	718.00
IUUC-Aor-009923	Aspergillus oryzae	43.02	0.00e+00	753.00
IUUC-Ate-010264	Aspergillus terreus	43.51	0.00e+00	757.00
IUUC-Ame-010790	Astyanax mexicanus	34.20	4.00e-65	241.00
IUUC-Bgr-012066	Blumeria graminis	41.77	0.00e+00	710.00
IUUC-Bta-012399	Bos taurus	40.69	0.00e+00	682.00
IUUC-Bci-013757	Botrytis cinerea	42.67	0.00e+00	700.00
IUUC-Bdi-015028	Brachypodium distachyon	72.05	0.00e+00	1247.00
IUUC-Bol-016521	Brassica oleracea	72.25	0.00e+00	1276.00
IUUC-Bra-017250	Brassica rapa	72.25	0.00e+00	1314.00
IUUC-Cel-018690	Caenorhabditis elegans	34.12	9.00e-144	503.00
IUUC-Cja-019229	Callithrix jacchus	42.04	0.00e+00	705.00
IUUC-Cfa-020504	Canis familiaris	40.87	0.00e+00	692.00
IUUC-Cpo-021574	Cavia porcellus	41.25	0.00e+00	716.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	51.70	0.00e+00	652.00
IUUC-Csa-023436	Chlorocebus sabaeus	41.94	0.00e+00	691.00
IUUC-Cin-025397	Ciona intestinalis	42.24	6.00e-163	567.00
IUUC-Csv-026194	Ciona savignyi	45.02	1.00e-134	473.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	40.94	0.00e+00	670.00
IUUC-Cne-027031	Cryptococcus neoformans	43.44	0.00e+00	773.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.62	6.00e-103	368.00
IUUC-Dre-027514	Danio rerio	43.02	0.00e+00	697.00
IUUC-Dno-029191	Dasypus novemcinctus	43.44	0.00e+00	636.00
IUUC-Dor-030149	Dipodomys ordii	40.72	0.00e+00	697.00
IUUC-Dse-031260	Dothistroma septosporum	43.96	1.00e-142	499.00
IUUC-Dme-032043	Drosophila melanogaster	37.24	1.00e-170	592.00
IUUC-Ete-033102	Echinops telfairi	45.18	2.00e-151	528.00
IUUC-Eca-033223	Equus caballus	41.41	0.00e+00	707.00
IUUC-Fca-035795	Felis catus	38.81	0.00e+00	642.00
IUUC-Fal-036830	Ficedula albicollis	41.05	0.00e+00	694.00
IUUC-Fox-037835	Fusarium oxysporum	40.83	0.00e+00	665.00
IUUC-Fso-038324	Fusarium solani	41.19	0.00e+00	673.00
IUUC-Gmo-039355	Gadus morhua	41.14	0.00e+00	701.00
IUUC-Ggr-039840	Gaeumannomyces graminis	41.13	0.00e+00	642.00
IUUC-Gga-040907	Gallus gallus	49.16	8.00e-155	539.00
IUUC-Gac-042624	Gasterosteus aculeatus	40.74	0.00e+00	677.00
IUUC-Gma-043034	Glycine max	82.72	0.00e+00	1545.00
IUUC-Hsa-046327	Homo sapiens	42.05	0.00e+00	714.00
IUUC-Hvu-047416	Hordeum vulgare	73.01	0.00e+00	1260.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	42.17	0.00e+00	721.00
IUUC-Kpa-049150	Komagataella pastoris	39.78	0.00e+00	640.00
IUUC-Lch-049460	Latimeria chalumnae	40.33	7.00e-178	617.00
IUUC-Lpe-050840	Leersia perrieri	72.40	0.00e+00	1259.00
IUUC-Loc-052733	Lepisosteus oculatus	41.10	0.00e+00	714.00
IUUC-Lma-053277	Leptosphaeria maculans	41.88	0.00e+00	706.00
IUUC-Laf-054294	Loxodonta africana	41.73	0.00e+00	684.00
IUUC-Mcc-054624	Macaca mulatta	41.82	0.00e+00	711.00
IUUC-Meu-056665	Macropus eugenii	37.01	3.00e-128	451.00
IUUC-Mor-057288	Magnaporthe oryzae	41.08	0.00e+00	672.00
IUUC-Mpo-057594	Magnaporthe poae	40.91	0.00e+00	645.00
IUUC-Mla-058846	Melampsora laricipopulina	41.35	0.00e+00	703.00
IUUC-Mga-059207	Meleagris gallopavo	37.96	4.00e-175	608.00
IUUC-Mvi-060327	Microbotryum violaceum	45.43	0.00e+00	788.00
IUUC-Mmr-061264	Microcebus murinus	41.72	0.00e+00	688.00
IUUC-Mdo-062327	Monodelphis domestica	41.21	0.00e+00	695.00
IUUC-Mmu-063542	Mus musculus	40.16	0.00e+00	687.00
IUUC-Mac-065142	Musa acuminata	71.38	0.00e+00	1292.00
IUUC-Mpu-066098	Mustela putorius furo	41.65	5.00e-176	610.00
IUUC-Mlu-067056	Myotis lucifugus	38.03	9.00e-169	587.00
IUUC-Nfi-068323	Neosartorya fischeri	43.44	0.00e+00	747.00
IUUC-Ncr-068925	Neurospora crassa	40.94	0.00e+00	693.00
IUUC-Nle-068970	Nomascus leucogenys	41.78	0.00e+00	709.00
IUUC-Opr-070966	Ochotona princeps	53.80	7.00e-105	374.00
IUUC-Ont-071252	Oreochromis niloticus	41.20	0.00e+00	701.00
IUUC-Oan-072737	Ornithorhynchus anatinus	39.73	0.00e+00	670.00
IUUC-Oba-075794	Oryza barthii	72.11	0.00e+00	1243.00
IUUC-Obr-076617	Oryza brachyantha	73.06	0.00e+00	1286.00
IUUC-Ogl-077022	Oryza glaberrima	73.84	0.00e+00	1294.00
IUUC-Ogu-078757	Oryza glumaepatula	60.63	0.00e+00	992.00
IUUC-Oin-079813	Oryza indica	73.39	0.00e+00	1296.00
IUUC-Olo-080265	Oryza longistaminata	73.51	0.00e+00	1290.00
IUUC-Ome-081494	Oryza meridionalis	73.62	0.00e+00	1296.00
IUUC-Oni-082639	Oryza nivara	60.74	0.00e+00	992.00
IUUC-Opu-084005	Oryza punctata	73.62	0.00e+00	1305.00
IUUC-Oru-084883	Oryza rufipogon	60.52	0.00e+00	990.00
IUUC-Osa-086158	Oryza sativa	73.51	0.00e+00	1295.00
IUUC-Ola-086822	Oryzias latipes	41.37	0.00e+00	700.00
IUUC-Oga-088887	Otolemur garnettii	41.35	0.00e+00	692.00
IUUC-Oar-090110	Ovis aries	40.00	0.00e+00	646.00
IUUC-Pan-092808	Papio anubis	42.24	0.00e+00	724.00
IUUC-Psi-093954	Pelodiscus sinensis	42.06	0.00e+00	721.00
IUUC-Pno-094922	Phaeosphaeria nodorum	42.23	0.00e+00	718.00
IUUC-Ppa-095678	Physcomitrella patens	58.11	0.00e+00	971.00
IUUC-Pfo-097175	Poecilia formosa	41.66	0.00e+00	714.00
IUUC-Pab-098155	Pongo abelii	41.98	0.00e+00	710.00
IUUC-Pop-099635	Populus trichocarpa	79.89	0.00e+00	1444.00
IUUC-Pca-100947	Procavia capensis	39.03	0.00e+00	655.00
IUUC-Ppe-101552	Prunus persica	79.73	0.00e+00	1493.00
IUUC-Pva-102744	Pteropus vampyrus	38.24	5.00e-173	600.00
IUUC-Pgr-103389	Puccinia graminis	42.46	0.00e+00	696.00
IUUC-Ptt-103953	Puccinia triticina	35.31	2.00e-151	529.00
IUUC-Pte-104079	Pyrenophora teres	42.28	0.00e+00	704.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	42.39	0.00e+00	709.00
IUUC-Rno-105502	Rattus norvegicus	40.07	0.00e+00	701.00
IUUC-Sce-106390	Saccharomyces cerevisiae	42.31	0.00e+00	719.00
IUUC-Sha-107264	Sarcophilus harrisii	42.14	4.00e-90	324.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	41.39	0.00e+00	723.00
IUUC-Spo-108348	Schizosaccharomyces pombe	41.52	0.00e+00	720.00
IUUC-Smo-109327	Selaginella moellendorffii	62.16	0.00e+00	1104.00
IUUC-Sit-110304	Setaria italica	73.84	0.00e+00	1330.00
IUUC-Sly-111620	Solanum lycopersicum	84.31	0.00e+00	1013.00
IUUC-Stu-112877	Solanum tuberosum	78.32	0.00e+00	1461.00
IUUC-Sbi-114702	Sorghum bicolor	73.92	0.00e+00	1313.00
IUUC-Sre-115129	Sporisorium reilianum	43.18	0.00e+00	710.00
IUUC-Ssc-115931	Sus scrofa	44.50	3.00e-95	341.00
IUUC-Tgu-116787	Taeniopygia guttata	40.88	0.00e+00	699.00
IUUC-Tru-118218	Takifugu rubripes	40.96	0.00e+00	705.00
IUUC-Tsy-119401	Tarsius syrichta	46.75	2.00e-123	436.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.14	0.00e+00	670.00
IUUC-Tca-121685	Theobroma cacao	78.23	0.00e+00	1453.00
IUUC-Tre-122154	Trichoderma reesei	40.97	0.00e+00	699.00
IUUC-Tvi-122451	Trichoderma virens	40.72	0.00e+00	699.00
IUUC-Tae-125397	Triticum aestivum	78.22	0.00e+00	757.00
IUUC-Tur-126650	Triticum urartu	74.14	0.00e+00	1189.00
IUUC-Tme-127005	Tuber melanosporum	44.01	0.00e+00	716.00
IUUC-Tbe-128102	Tupaia belangeri	42.38	9.00e-122	430.00
IUUC-Ttr-128259	Tursiops truncatus	41.74	0.00e+00	684.00
IUUC-Uma-129511	Ustilago maydis	44.02	0.00e+00	722.00
IUUC-Vda-129833	Verticillium dahliae	39.46	6.00e-177	613.00
IUUC-Vvi-131572	Vitis vinifera	77.14	0.00e+00	1401.00
IUUC-Xtr-131776	Xenopus tropicalis	37.31	2.00e-63	236.00
IUUC-Xma-133887	Xiphophorus maculatus	41.48	0.00e+00	692.00
IUUC-Yli-134427	Yarrowia lipolytica	40.97	0.00e+00	693.00
IUUC-Zma-135980	Zea mays	73.11	0.00e+00	1266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence