iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100067

UUCD1 version

UUC-PoT-01571

Ensembl Protein ID

POPTR_0016s02550.1

UniProt Accession

A9PD43; A9PD43_POPTR

Genbank Protein ID

ABK94296.1; EEF04958.1

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

EF146206; CM000352

Gene Name

POPTRDRAFT_734661; POPTR_0016s02550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s02550	POPTR_0016s02550.1	POPTR_0016s02550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.10e-37	130.0	17	150

Active Site

Position(s)	Description	Evidence
96	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           l+kelk+l+++ppegi+++++d+ d+  + + i+Gp++tpYe+gvF++++ +++d+P +PPk  flt+ifhPn+ +nG++C++ lk  ++W
   Q: 17   LAKELKNLDESPPEGIQVGVNDD-DFSIIYADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTRIFHPNIASNGEICVNTLK--KDW 104
           78*********************.9************************************************************9..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +p l +++vl+ +  ll ep pes+lne+a ++l +n eey +++r
   Q: 105  NPSLGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 150
           *****************************************99875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAMATNENLP PNVIKQLAKE LKNLDESPPE GIQVGVNDDD FSIIYADIEG PAGTPYENGV 60
FRMKLLLSHD FPHSPPKGYF LTRIFHPNIA SNGEICVNTL KKDWNPSLGL RHVLTVVRCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACCTCTC TTCACTCGCA GATTAAAACA TTTTACAACA CGCGCGGGCT CTGCCGGTTT 60
TTCTCCTCAA AAAGCGAGCC ACACACGGAA ACCAGAGCGT GGGATTGAAT CTCCATCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0016s02550g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000904	Aegilops tauschii	70.90	3.00e-90	323.00
IUUC-Afl-008578	Aspergillus flavus	45.99	2.00e-33	135.00
IUUC-Ani-009151	Aspergillus nidulans	49.62	4.00e-34	138.00
IUUC-Cin-025632	Ciona intestinalis	58.75	3.00e-56	210.00
IUUC-Csv-025984	Ciona savignyi	57.50	7.00e-55	206.00
IUUC-Cme-027294	Cyanidioschyzon merolae	55.28	1.00e-52	199.00
IUUC-Dre-027674	Danio rerio	52.13	3.00e-54	204.00
IUUC-Ete-032365	Echinops telfairi	70.48	1.00e-44	171.00
IUUC-Hvu-047281	Hordeum vulgare	71.64	5.00e-87	313.00
IUUC-Lch-049415	Latimeria chalumnae	71.43	7.00e-44	169.00
IUUC-Nfi-068520	Neosartorya fischeri	47.33	7.00e-34	137.00
IUUC-Pgr-103394	Puccinia graminis	43.20	5.00e-47	180.00
IUUC-Ptt-103750	Puccinia triticina	51.61	5.00e-46	177.00
IUUC-Smo-108939	Selaginella moellendorffii	60.23	2.00e-69	254.00
IUUC-Tme-127125	Tuber melanosporum	42.19	1.00e-38	153.00
IUUC-Ttr-128593	Tursiops truncatus	52.82	1.00e-54	205.00
IUUC-Uma-129592	Ustilago maydis	43.42	2.00e-37	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence