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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006828
UUCD1 version UUC-ArT-01265
Ensembl Protein ID AT1G02980.1
UniProt Accession Q9SRZ0; Q8GY26; CUL2_ARATH
Genbank Protein ID AAF02868.1; AEE27509.1; ANM59352.1; BAC42547.1; AAP12880.1
Protein Name Cullin-2
Genbank Nucleotide ID AC009525; CP002684; CP002684; AK117909; BT006231
Gene Name CUL2; At1g02980; F22D16.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G02980 AT1G02980.1 AT1G02980.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/Cullin 4.20e-136 456.1 22 645
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/Cullin

   S: 2    lreavkkilrqesv.kkeyeelytavynlclsk....vgaklYkklkevleefi.kqvkkkveesedeqlLktynreWekfreqlkvlrkifayldrt 93
    l+++++++ + + ++lyt v+nlc++k +++++Y++ v +++ + v + e+++e +L+ +++ W + ++ + l + f yldr
   Q: 22 LQKILEEVPDEPPFdPVQRMQLYTTVHNLCTQKppndYSQQIYDRYGGVYVDYNkQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRF 119
    66777777777777778889**********************************67789*************************************** PP
   S: 94 yvkkskkvsevrkLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqefykaesaeflqen 191
    y+++ + + +++ ++r+ + ++++++ +++l li++eR+ge++dr ll++v+ ++ ++ +l y+e+FE+ le ++ +y++++++ qen
   Q: 120 YTRR-GSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQEN 216
    ****.999****************************************************************************************** PP
   S: 192 evdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrvlngleellkeleshikeqgk 285
    ++ +Y+ k+e++l+ e+er+ +yl+++te kL+++v++el++ +++l+ +++ allrd+k +dl+rmy+L + +++gl+++++ +++hi +g+
   Q: 217 SCPDYMIKAEESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIenehSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGS 314
    ****************************************99999999989999******************************************** PP
   S: 286 aalt.aeekek............dpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks..skglt 368
    a++ a +++ + + +++l++l++k+ v+e+F++ F kal++afe f nk+ + s+E lA y+D+ L+ + + +l+
   Q: 315 ALIKqA-TEAAtdkaastsglkvQDQVLIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKT--VAGVSSAEILATYCDNILKTGggIEKLE 409
    ****53.44433689999***995599*****************************************..5556789************9999***** PP
   S: 369 eeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrqFkeeke.nteesesve 465
    +e+le +l+kv+ ++ yis+kd+F ++++k a+RLl + + E+s+++k ke ga+ftsk+e+M++d+ + ++ +++F e + n+ ++ +++
   Q: 410 NEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSvNKTKKLGMD 507
    ***********************************************************************************9876526667799** PP
   S: 466 lsvlvLsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkgkyelqVstfQmavLLafnnsekvsveelkkatel 563
    ++v vL++g+Wp + +t ++LP e+ + +e+f+++Y k + R+L+W ++lg+++l +++k++ e+ V+t+Q+avLL+fnn+e++s+ e+ ++ +l
   Q: 508 FTVTVLTTGFWPSYKTTD-LNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQLNL 604
    **************7765.******************************************************************************* PP
   S: 564 peeeLrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
    +e+L r l sL + k ++l kep+s++i+++d+f +N++f
   Q: 605 GHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKF 645
    ***************************************98 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Core component of multiple SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes. Involved in ubiquitination and subsequent proteasomal degradation of target proteins (By similarity).
Core component of multiple SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes. Involved in ubiquitination and subsequent proteasomal degradation of target proteins (By similarity).
Protein Sequence
(Fasta)
MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS 60
QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA NQKILVRWLS HFFEYLDRFY 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006828|E3,Cullin|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCAACTTCT CGATTCTCAG AGCTCTTCCA AATCCCTGTG AAATCGGATT CGAGTAATAC 60
TCTCGGAACC TTCTGGTACG TGACGAACCT AGGGTTTAAG ATCGCACACT TTTCTCTTCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006828|E3,Cullin|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG ath:AT1G02980
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005826 Arabidopsis lyrata 82.08 0.00e+00 1255.00
Created Date 25-Jun-2017

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