iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000015208.9	ENSDART00000081335.6	ENSDARP00000075778.5
ENSDARG00000015208.9	ENSDART00000142481.2	ENSDARP00000117542.1
ENSDARG00000015208.9	ENSDART00000008144.7	ENSDARP00000025096.7

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-35	119.9	272	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 272  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 306
           **********96554568*************9875 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MADKEVYDDA VEERVINEEY KIWKKNTPFL YDLVMTHALE WPSLTVQWLP DVNRPEGKDY 60
VVHRLVLGTH TSDEQNHLVI ASVQIPNDDA QFDASHYDSE KGAEFGGFGS VSGKIEIEIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTCACGTT GGTTTTGCGC TTGTGAGATG CGCGAACTGG TTTTGCAAGT GACGTGTGTT 60
GAGTGTAAAA GCCTGTTTTT CTGCTTTTTG GCTCTATATC CCTGGTCCAT TCAGTGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007892	Ashbya gossypii	38.22	3.00e-79	289.00
IUUC-Ame-011771	Astyanax mexicanus	98.81	0.00e+00	867.00
IUUC-Bol-015856	Brassica oleracea	66.83	1.00e-163	569.00
IUUC-Csa-023738	Chlorocebus sabaeus	89.79	0.00e+00	790.00
IUUC-Cme-027307	Cyanidioschyzon merolae	51.84	1.00e-128	452.00
IUUC-Dor-030733	Dipodomys ordii	78.47	0.00e+00	662.00
IUUC-Gmo-038593	Gadus morhua	97.83	0.00e+00	841.00
IUUC-Ggr-039741	Gaeumannomyces graminis	52.29	2.00e-120	426.00
IUUC-Gac-042627	Gasterosteus aculeatus	97.16	0.00e+00	848.00
IUUC-Lch-050545	Latimeria chalumnae	94.98	0.00e+00	829.00
IUUC-Loc-052050	Lepisosteus oculatus	97.41	0.00e+00	854.00
IUUC-Mpo-057602	Magnaporthe poae	50.12	1.00e-120	426.00
IUUC-Mvi-060450	Microbotryum violaceum	57.80	1.00e-135	476.00
IUUC-Mdo-062817	Monodelphis domestica	92.64	0.00e+00	816.00
IUUC-Ont-072590	Oreochromis niloticus	97.16	0.00e+00	852.00
IUUC-Ocu-074778	Oryctolagus cuniculus	89.55	0.00e+00	789.00
IUUC-Olu-087579	Ostreococcus lucimarinus	61.54	2.00e-144	505.00
IUUC-Ptr-091598	Pan troglodytes	90.14	0.00e+00	783.00
IUUC-Pan-092412	Papio anubis	89.79	0.00e+00	790.00
IUUC-Pfo-097240	Poecilia formosa	96.92	0.00e+00	844.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	49.38	6.00e-108	384.00
IUUC-Sar-113236	Sorex araneus	82.21	0.00e+00	691.00
IUUC-Ssc-116352	Sus scrofa	89.95	0.00e+00	786.00
IUUC-Tsy-118854	Tarsius syrichta	89.71	0.00e+00	784.00
IUUC-Tur-126850	Triticum urartu	61.99	4.00e-114	405.00
IUUC-Tbe-128010	Tupaia belangeri	78.95	0.00e+00	678.00
IUUC-Ttr-128558	Tursiops truncatus	80.05	0.00e+00	678.00
IUUC-Xtr-132005	Xenopus tropicalis	93.35	0.00e+00	822.00
IUUC-Xma-133485	Xiphophorus maculatus	97.16	0.00e+00	850.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence