iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098934

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_722610; POPTR_0009s07950g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s07950	POPTR_0009s07950.1	POPTR_0009s07950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E1	8.40e-166	553.4	489	976

Active Site

Position(s)	Description	Evidence
670	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU10132}

Domain Profile

   S: 1    YDRQirlwGeeaqeklksakvllvGagglGcEllKnLvlaGv.....gsitvvDmdtvevsnlnrqFLfraedvgksKAevaaealkelnp 86
           YD Qi ++G++ q+kl+ a+ ++vG g+lGcE+lKnL+l+Gv     g++t++D+d +e+snl+rqFLfr++++g+ K+ vaa a++ +np
   Q: 489  YDAQISVFGSNLQKKLEGANLFVVGSGALGCEFLKNLALMGVscgeqGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP 579
           ******************************************************************************************* PP
   S: 87   dvnveaheesiteleeeiv...FfkkfdvVvlaldnrearrkvnrlclnarvpliesgtlGllGqvrviikgltecyscsddppqktiPfc 174
           + ++ea ++++  ++e+++   F ++++ Vv+aldn+ ar++v+++cl+ ++pl+esgtlG + +++ +i++lte y +s+dpp+k++P+c
   Q: 580  HLKIEALQNRVGSETENVFddtFWENLTAVVNALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMC 670
           *****************99************************************************************************ PP
   S: 175  tlketpnaaehtiewa............vlfnklleeeageeevlekldseekeegkdkvkselksedeenfeeaieiavkafakttinsi 253
           t+ ++p +++h+++wa            + +n +l++  + ++   k   ++++++++ v + l++e+ e+ +++i++a+ +f+ +++  +
   Q: 671  TVHSFPHNIDHCLTWArsefeglvektpAEVNAYLSNPVEYTNAMIKAGDAQSRDILEHVLECLEKEKCETLQDCISWARLKFEDYFSDRV 761
           ***************************99999999999999999999******************************************** PP
   S: 254  kqllksfecdivtkskspfwv.........................................................sfcsnaealqvpe 287
           kql+  f+ d  t+ ++pfw+                                                          f + +  + + +
   Q: 762  KQLIYTFPEDASTSTGVPFWSapkrfphplqfsttdlshlhfvmaasvlraetfgipvpdwirnpkmvaeavdkvivpDFQPREGVKIETD 852
           *************************************999999999999999999999999988877666666666664444443333334 PP
   S: 288  kvekdeevvkasap..lylllralerfekk..kgrkpgelsfekddds..avdlvtaaanlraeslgiepkldddlikeiagniipaiatt 372
             + +  + +++++  +  l+r+le+ +++   g  ++ ++fekddd   ++dl++ +an+ra +++i++ +d+ + k iag+iipaiat 
   Q: 853  EKATNLSNASVDDAaiINELIRKLELCRENlpAGFRMKPIQFEKDDDTnyHMDLIAGLANMRARNYSIPE-VDKLKAKFIAGRIIPAIATS 942
           4444444444444468999999999888874478999*********************************.******************** PP
   S: 373  navvgGlaaqEviKvvsg..kfeplknfflfdae 404
           +a+  Gl+++E++Kv++g  k e ++n+f ++a+
   Q: 943  TAMATGLVCLELYKVLDGghKVEDYRNTFANLAL 976
           ******************999********99875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

LLYFMLPKRL PVEAVLVEGE GSENNIAKDS SSVFKKHRVD CYLESTAANS NKKTSSVIGN 60
CSDISRESGG AEEKVSMALG DSNPSEIDED LHSRQLAVYG RETMRRLFAS NVLVSGMQGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTACTGTACT TTATGCTTCC TAAAAGGCTA CCAGTTGAAG CTGTGTTGGT AGAAGGAGAA 60
GGAAGTGAAA ACAACATAGC AAAAGATTCG TCATCGGTCT TTAAGAAGCA TCGGGTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0436--Ligase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR032420--E1_4HB
IPR032418--E1_FCCH
IPR016040--NAD(P)-bd_dom
IPR000594--ThiF_NAD_FAD-bd
IPR018965--Ub-activating_enz_E1_C
IPR019572--UBA_E1_Cys
IPR018075--UBQ-activ_enz_E1
IPR018074--UBQ-activ_enz_E1_CS
IPR033127--UBQ-activ_enz_E1_Cys_AS
IPR000011--UBQ/SUMO-activ_enz_E1-like

PROSITE

PS00536--UBIQUITIN_ACTIVAT_1
PS00865--UBIQUITIN_ACTIVAT_2

Pfam

PF16191--E1_4HB
PF16190--E1_FCCH
PF09358--E1_UFD
PF00899--ThiF
PF10585--UBA_e1_thiolCys

PRINTS

PR01849--UBIQUITINACT

SMART

SM00985--UBA_e1_C

Gene Ontology

GO:0005524--F:ATP binding
GO:0008641--F:small protein activating enzyme activity
GO:0006464--P:cellular protein modification process

KEGG

pop:POPTR_0009s07950g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000456	Aegilops tauschii	79.03	0.00e+00	1658.00
IUUC-Aml-001311	Ailuropoda melanoleuca	45.67	0.00e+00	902.00
IUUC-Atr-002684	Amborella trichopoda	79.88	0.00e+00	1695.00
IUUC-Apl-004158	Anas platyrhynchos	38.51	0.00e+00	671.00
IUUC-Aca-004620	Anolis carolinensis	44.19	0.00e+00	877.00
IUUC-Aly-005418	Arabidopsis lyrata	82.08	0.00e+00	1786.00
IUUC-Ago-007873	Ashbya gossypii	45.95	0.00e+00	853.00
IUUC-Afl-008455	Aspergillus flavus	45.83	0.00e+00	818.00
IUUC-Ang-009737	Aspergillus niger	45.68	0.00e+00	826.00
IUUC-Aor-010007	Aspergillus oryzae	45.83	0.00e+00	817.00
IUUC-Ame-010933	Astyanax mexicanus	43.40	0.00e+00	843.00
IUUC-Bgr-012281	Blumeria graminis	45.61	0.00e+00	857.00
IUUC-Bta-012767	Bos taurus	45.50	0.00e+00	908.00
IUUC-Bci-013721	Botrytis cinerea	46.11	0.00e+00	815.00
IUUC-Bdi-014843	Brachypodium distachyon	78.47	0.00e+00	1615.00
IUUC-Bol-015880	Brassica oleracea	81.60	0.00e+00	1781.00
IUUC-Bra-017252	Brassica rapa	82.22	0.00e+00	1782.00
IUUC-Cel-018260	Caenorhabditis elegans	38.10	0.00e+00	664.00
IUUC-Cja-019152	Callithrix jacchus	44.18	0.00e+00	907.00
IUUC-Cfa-020622	Canis familiaris	44.42	0.00e+00	858.00
IUUC-Cpo-022526	Cavia porcellus	45.37	0.00e+00	891.00
IUUC-Cre-022702	Chlamydomonas reinhardtii	58.02	0.00e+00	1177.00
IUUC-Csa-023780	Chlorocebus sabaeus	45.18	0.00e+00	904.00
IUUC-Cho-024682	Choloepus hoffmanni	36.54	1.00e-101	364.00
IUUC-Cin-025790	Ciona intestinalis	44.53	0.00e+00	893.00
IUUC-Csv-026084	Ciona savignyi	43.78	0.00e+00	870.00
IUUC-Cgl-026512	Colletotrichum gloeosporioides	46.16	0.00e+00	886.00
IUUC-Cne-026960	Cryptococcus neoformans	45.06	0.00e+00	857.00
IUUC-Cme-027290	Cyanidioschyzon merolae	38.50	0.00e+00	677.00
IUUC-Dre-028149	Danio rerio	44.09	0.00e+00	872.00
IUUC-Dno-028884	Dasypus novemcinctus	45.37	0.00e+00	909.00
IUUC-Dor-030229	Dipodomys ordii	43.54	0.00e+00	857.00
IUUC-Dse-031524	Dothistroma septosporum	43.08	0.00e+00	826.00
IUUC-Dme-032045	Drosophila melanogaster	43.76	0.00e+00	844.00
IUUC-Ete-033124	Echinops telfairi	38.73	5.00e-130	458.00
IUUC-Eca-033330	Equus caballus	45.28	0.00e+00	904.00
IUUC-Eeu-035323	Erinaceus europaeus	40.06	1.00e-149	523.00
IUUC-Fca-036255	Felis catus	45.50	0.00e+00	894.00
IUUC-Fal-036848	Ficedula albicollis	38.83	0.00e+00	681.00
IUUC-Fox-038007	Fusarium oxysporum	46.81	1.00e-135	476.00
IUUC-Fso-038339	Fusarium solani	46.80	0.00e+00	836.00
IUUC-Gmo-039338	Gadus morhua	42.29	0.00e+00	842.00
IUUC-Gga-040747	Gallus gallus	38.93	0.00e+00	667.00
IUUC-Gac-041773	Gasterosteus aculeatus	43.84	0.00e+00	853.00
IUUC-Gma-043198	Glycine max	86.35	0.00e+00	1804.00
IUUC-Ggo-045336	Gorilla gorilla	45.28	0.00e+00	888.00
IUUC-Hsa-045982	Homo sapiens	45.28	0.00e+00	888.00
IUUC-Hvu-047418	Hordeum vulgare	79.94	0.00e+00	1642.00
IUUC-Itr-048460	Ictidomys tridecemlineatus	45.28	0.00e+00	904.00
IUUC-Kpa-049112	Komagataella pastoris	46.40	0.00e+00	880.00
IUUC-Lch-050371	Latimeria chalumnae	44.69	0.00e+00	896.00
IUUC-Lpe-051299	Leersia perrieri	77.01	0.00e+00	1634.00
IUUC-Loc-052936	Lepisosteus oculatus	45.64	0.00e+00	891.00
IUUC-Laf-053948	Loxodonta africana	44.69	0.00e+00	877.00
IUUC-Mcc-055843	Macaca mulatta	45.18	0.00e+00	906.00
IUUC-Meu-056258	Macropus eugenii	44.99	0.00e+00	885.00
IUUC-Mor-057269	Magnaporthe oryzae	45.00	0.00e+00	857.00
IUUC-Mpo-057435	Magnaporthe poae	45.66	0.00e+00	851.00
IUUC-Mtr-058572	Medicago truncatula	84.00	0.00e+00	1739.00
IUUC-Mla-059176	Melampsora laricipopulina	46.04	0.00e+00	868.00
IUUC-Mga-059721	Meleagris gallopavo	39.11	0.00e+00	649.00
IUUC-Mvi-060437	Microbotryum violaceum	43.50	0.00e+00	817.00
IUUC-Mmr-061405	Microcebus murinus	44.20	0.00e+00	863.00
IUUC-Mdo-062032	Monodelphis domestica	44.04	0.00e+00	865.00
IUUC-Mmu-063721	Mus musculus	44.96	0.00e+00	897.00
IUUC-Mac-065505	Musa acuminata	78.34	0.00e+00	1675.00
IUUC-Mpu-066409	Mustela putorius furo	45.69	0.00e+00	912.00
IUUC-Mlu-067217	Myotis lucifugus	45.03	0.00e+00	895.00
IUUC-Ncr-068698	Neurospora crassa	45.63	0.00e+00	857.00
IUUC-Nle-070072	Nomascus leucogenys	42.47	0.00e+00	808.00
IUUC-Opr-070715	Ochotona princeps	35.29	1.00e-151	530.00
IUUC-Ont-071671	Oreochromis niloticus	45.00	0.00e+00	879.00
IUUC-Oan-073268	Ornithorhynchus anatinus	40.61	2.00e-179	622.00
IUUC-Ocu-074544	Oryctolagus cuniculus	45.47	0.00e+00	912.00
IUUC-Oba-075120	Oryza barthii	77.27	0.00e+00	1627.00
IUUC-Obr-076557	Oryza brachyantha	77.51	0.00e+00	1629.00
IUUC-Ogl-077887	Oryza glaberrima	77.27	0.00e+00	1628.00
IUUC-Ogu-078305	Oryza glumaepatula	76.71	0.00e+00	1621.00
IUUC-Oin-080154	Oryza indica	76.91	0.00e+00	1620.00
IUUC-Olo-081089	Oryza longistaminata	77.01	0.00e+00	1627.00
IUUC-Ome-081942	Oryza meridionalis	78.81	0.00e+00	1630.00
IUUC-Oni-082365	Oryza nivara	79.10	0.00e+00	1635.00
IUUC-Opu-083301	Oryza punctata	77.37	0.00e+00	1628.00
IUUC-Oru-084469	Oryza rufipogon	77.01	0.00e+00	1623.00
IUUC-Osa-085949	Oryza sativa	77.27	0.00e+00	1650.00
IUUC-Ola-087002	Oryzias latipes	45.00	0.00e+00	882.00
IUUC-Olu-087687	Ostreococcus lucimarinus	58.96	0.00e+00	1148.00
IUUC-Oga-088594	Otolemur garnettii	45.60	0.00e+00	883.00
IUUC-Oar-090068	Ovis aries	45.40	0.00e+00	900.00
IUUC-Pan-092114	Papio anubis	45.18	0.00e+00	905.00
IUUC-Psi-093489	Pelodiscus sinensis	38.60	0.00e+00	666.00
IUUC-Pno-095154	Phaeosphaeria nodorum	45.11	0.00e+00	857.00
IUUC-Pfo-097184	Poecilia formosa	44.62	0.00e+00	872.00
IUUC-Pab-097861	Pongo abelii	45.28	0.00e+00	877.00
IUUC-Pca-100347	Procavia capensis	42.73	0.00e+00	730.00
IUUC-Ppe-101298	Prunus persica	80.40	0.00e+00	1776.00
IUUC-Pva-102584	Pteropus vampyrus	45.79	0.00e+00	934.00
IUUC-Pgr-103336	Puccinia graminis	45.75	0.00e+00	833.00
IUUC-Ptt-103939	Puccinia triticina	45.71	0.00e+00	834.00
IUUC-Pte-104200	Pyrenophora teres	46.31	0.00e+00	892.00
IUUC-Pyt-104441	Pyrenophora triticirepentis	45.56	0.00e+00	883.00
IUUC-Rno-105462	Rattus norvegicus	44.79	0.00e+00	882.00
IUUC-Sce-106245	Saccharomyces cerevisiae	45.21	0.00e+00	890.00
IUUC-Sha-107142	Sarcophilus harrisii	44.91	0.00e+00	894.00
IUUC-Sja-107841	Schizosaccharomyces japonicus	44.60	0.00e+00	857.00
IUUC-Spo-108034	Schizosaccharomyces pombe	44.02	0.00e+00	847.00
IUUC-Ssl-108497	Sclerotinia sclerotiorum	45.58	0.00e+00	825.00
IUUC-Smo-108912	Selaginella moellendorffii	72.48	0.00e+00	1531.00
IUUC-Sit-110281	Setaria italica	80.67	0.00e+00	1664.00
IUUC-Sly-110914	Solanum lycopersicum	81.23	0.00e+00	1759.00
IUUC-Stu-112001	Solanum tuberosum	78.36	0.00e+00	1716.00
IUUC-Sar-113737	Sorex araneus	45.36	0.00e+00	896.00
IUUC-Sbi-114089	Sorghum bicolor	80.57	0.00e+00	1664.00
IUUC-Sre-115148	Sporisorium reilianum	46.10	0.00e+00	842.00
IUUC-Ssc-115777	Sus scrofa	45.35	0.00e+00	903.00
IUUC-Tgu-116565	Taeniopygia guttata	38.83	0.00e+00	676.00
IUUC-Tru-118742	Takifugu rubripes	44.91	0.00e+00	834.00
IUUC-Tni-120401	Tetraodon nigroviridis	44.79	0.00e+00	835.00
IUUC-Tca-121436	Theobroma cacao	84.19	0.00e+00	1849.00
IUUC-Tre-122009	Trichoderma reesei	47.26	0.00e+00	838.00
IUUC-Tvi-122259	Trichoderma virens	46.55	0.00e+00	826.00
IUUC-Tae-125113	Triticum aestivum	80.00	0.00e+00	1610.00
IUUC-Tur-126330	Triticum urartu	79.03	0.00e+00	1660.00
IUUC-Tme-127055	Tuber melanosporum	44.53	0.00e+00	819.00
IUUC-Ttr-128331	Tursiops truncatus	45.60	0.00e+00	894.00
IUUC-Uma-129387	Ustilago maydis	45.99	0.00e+00	842.00
IUUC-Vda-129977	Verticillium dahliae	47.31	0.00e+00	816.00
IUUC-Xma-133805	Xiphophorus maculatus	44.42	0.00e+00	855.00
IUUC-Yli-134547	Yarrowia lipolytica	45.32	0.00e+00	870.00
IUUC-Zma-135052	Zea mays	79.45	0.00e+00	1667.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence