iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022331

Ensembl Protein ID

ENSCPOP00000008251.2

UniProt Accession

H0VE23; H0VE23_CAVPO

Genbank Protein ID

ENSCPOP00000008251

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02009897

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000009190.3	ENSCPOT00000009273.2	ENSCPOP00000008251.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-23	80.2	301	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrt 32
           la+ ++ ++l+s+++D  +k WD+ +
   Q: 301  LALsHCgRFLASSGHDQHLKFWDMAQ 326
           666534488**************866 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MDSTCEERPA NDGSDEEDSD STEAPARIRD TPEDIVLEAP ASGLAFHPTR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKACRAV VFSEDGQKLV TVSKDKAIHI LDVEQGRLER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAGCA CGTGTGAAGA GAGGCCTGCG AACGATGGGA GCGACGAGGA GGATTCTGAC 60
TCCACTGAAG CCCCGGCCCG GATCCGGGAC ACCCCGGAAG ACATTGTGCT GGAAGCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	36.26	2.00e-47	182.00
IUUC-Aml-001768	Ailuropoda melanoleuca	92.67	0.00e+00	731.00
IUUC-Atr-002764	Amborella trichopoda	34.21	8.00e-22	95.90
IUUC-Apl-003880	Anas platyrhynchos	65.02	7.00e-117	415.00
IUUC-Aca-005060	Anolis carolinensis	66.67	7.00e-151	528.00
IUUC-Aly-006484	Arabidopsis lyrata	37.16	6.00e-50	191.00
IUUC-Ath-006652	Arabidopsis thaliana	39.32	3.00e-58	218.00
IUUC-Bta-013497	Bos taurus	92.70	0.00e+00	700.00
IUUC-Bdi-014378	Brachypodium distachyon	37.91	3.00e-56	212.00
IUUC-Bol-016352	Brassica oleracea	39.66	3.00e-60	225.00
IUUC-Bra-017103	Brassica rapa	39.66	2.00e-60	226.00
IUUC-Cel-018192	Caenorhabditis elegans	26.36	9.00e-16	77.80
IUUC-Cja-018792	Callithrix jacchus	90.62	0.00e+00	687.00
IUUC-Cfa-020739	Canis familiaris	93.33	0.00e+00	707.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	40.96	7.00e-37	146.00
IUUC-Csa-023414	Chlorocebus sabaeus	92.43	0.00e+00	727.00
IUUC-Cho-024600	Choloepus hoffmanni	92.86	0.00e+00	643.00
IUUC-Cin-025565	Ciona intestinalis	39.02	6.00e-63	234.00
IUUC-Csv-026294	Ciona savignyi	35.99	2.00e-62	232.00
IUUC-Cne-026979	Cryptococcus neoformans	33.33	2.00e-40	159.00
IUUC-Cme-027192	Cyanidioschyzon merolae	26.13	9.00e-21	94.40
IUUC-Dre-028492	Danio rerio	64.17	2.00e-129	455.00
IUUC-Dno-030050	Dasypus novemcinctus	88.80	0.00e+00	642.00
IUUC-Dor-030386	Dipodomys ordii	82.64	3.00e-173	601.00
IUUC-Dse-031203	Dothistroma septosporum	24.92	2.00e-12	67.00
IUUC-Dme-032012	Drosophila melanogaster	34.59	1.00e-59	224.00
IUUC-Ete-032491	Echinops telfairi	90.13	0.00e+00	694.00
IUUC-Eca-033583	Equus caballus	94.77	0.00e+00	723.00
IUUC-Eeu-034976	Erinaceus europaeus	96.68	6.00e-176	609.00
IUUC-Fca-036417	Felis catus	90.58	0.00e+00	692.00
IUUC-Gmo-039505	Gadus morhua	66.07	1.00e-138	485.00
IUUC-Ggr-039978	Gaeumannomyces graminis	24.06	3.00e-11	62.80
IUUC-Gga-040732	Gallus gallus	69.53	8.00e-145	506.00
IUUC-Gac-041313	Gasterosteus aculeatus	64.88	2.00e-135	475.00
IUUC-Gma-044122	Glycine max	40.75	3.00e-58	218.00
IUUC-Ggo-044748	Gorilla gorilla	92.95	0.00e+00	728.00
IUUC-Hsa-046943	Homo sapiens	91.91	0.00e+00	719.00
IUUC-Hvu-047659	Hordeum vulgare	36.84	8.00e-55	207.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	93.94	0.00e+00	683.00
IUUC-Lch-050331	Latimeria chalumnae	59.33	3.00e-113	401.00
IUUC-Lpe-051193	Leersia perrieri	39.08	9.00e-59	220.00
IUUC-Loc-051946	Lepisosteus oculatus	66.86	5.00e-134	471.00
IUUC-Laf-054035	Loxodonta africana	91.44	0.00e+00	679.00
IUUC-Mcc-055285	Macaca mulatta	91.35	9.00e-96	342.00
IUUC-Meu-056596	Macropus eugenii	85.29	6.00e-172	596.00
IUUC-Mor-056995	Magnaporthe oryzae	25.29	4.00e-13	69.30
IUUC-Mtr-058637	Medicago truncatula	40.07	1.00e-57	217.00
IUUC-Mga-059839	Meleagris gallopavo	67.07	6.00e-95	342.00
IUUC-Mdo-062868	Monodelphis domestica	83.89	6.00e-177	614.00
IUUC-Mmu-064305	Mus musculus	90.40	0.00e+00	686.00
IUUC-Mac-065041	Musa acuminata	38.38	8.00e-58	217.00
IUUC-Mpu-066779	Mustela putorius furo	93.44	0.00e+00	695.00
IUUC-Mlu-067223	Myotis lucifugus	93.37	0.00e+00	677.00
IUUC-Ncr-068919	Neurospora crassa	25.95	3.00e-08	53.10
IUUC-Nle-069852	Nomascus leucogenys	92.17	0.00e+00	684.00
IUUC-Ont-072452	Oreochromis niloticus	67.56	2.00e-140	492.00
IUUC-Oan-073163	Ornithorhynchus anatinus	83.45	2.00e-65	241.00
IUUC-Ocu-074628	Oryctolagus cuniculus	95.59	0.00e+00	715.00
IUUC-Oba-075868	Oryza barthii	38.38	6.00e-56	211.00
IUUC-Obr-076768	Oryza brachyantha	38.73	2.00e-57	216.00
IUUC-Ogl-077424	Oryza glaberrima	39.08	1.00e-58	220.00
IUUC-Ogu-078847	Oryza glumaepatula	38.73	2.00e-56	212.00
IUUC-Oin-079495	Oryza indica	39.08	1.00e-58	220.00
IUUC-Olo-080268	Oryza longistaminata	38.73	2.00e-56	212.00
IUUC-Ome-081709	Oryza meridionalis	38.46	4.00e-50	191.00
IUUC-Oni-082749	Oryza nivara	39.08	1.00e-58	220.00
IUUC-Opu-084023	Oryza punctata	32.39	2.00e-39	155.00
IUUC-Oru-084764	Oryza rufipogon	38.73	2.00e-56	212.00
IUUC-Osa-086009	Oryza sativa	39.08	1.00e-58	219.00
IUUC-Ola-086463	Oryzias latipes	62.22	1.00e-129	456.00
IUUC-Olu-087897	Ostreococcus lucimarinus	32.28	2.00e-43	169.00
IUUC-Oga-089114	Otolemur garnettii	92.60	0.00e+00	701.00
IUUC-Ptr-090556	Pan troglodytes	92.17	0.00e+00	721.00
IUUC-Pan-092828	Papio anubis	92.17	0.00e+00	725.00
IUUC-Psi-093609	Pelodiscus sinensis	72.92	4.00e-121	429.00
IUUC-Pma-094413	Petromyzon marinus	53.87	1.00e-101	363.00
IUUC-Ppa-095422	Physcomitrella patens	41.14	1.00e-65	243.00
IUUC-Pfo-096389	Poecilia formosa	65.77	5.00e-132	464.00
IUUC-Pab-098095	Pongo abelii	93.21	0.00e+00	728.00
IUUC-Pop-099612	Populus trichocarpa	35.71	2.00e-54	206.00
IUUC-Pca-100408	Procavia capensis	90.79	0.00e+00	687.00
IUUC-Ppe-101931	Prunus persica	38.64	1.00e-54	206.00
IUUC-Pva-102549	Pteropus vampyrus	92.84	0.00e+00	699.00
IUUC-Rno-105079	Rattus norvegicus	92.56	0.00e+00	706.00
IUUC-Sha-107299	Sarcophilus harrisii	85.38	7.00e-164	571.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.79	1.00e-22	100.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.82	3.00e-28	119.00
IUUC-Smo-109613	Selaginella moellendorffii	39.30	2.00e-50	192.00
IUUC-Sit-110263	Setaria italica	38.03	1.00e-56	213.00
IUUC-Sly-110988	Solanum lycopersicum	37.46	2.00e-53	202.00
IUUC-Stu-112713	Solanum tuberosum	37.81	3.00e-54	205.00
IUUC-Sbi-114617	Sorghum bicolor	36.97	2.00e-54	206.00
IUUC-Sre-115136	Sporisorium reilianum	30.11	2.00e-12	67.00
IUUC-Ssc-116268	Sus scrofa	93.01	0.00e+00	720.00
IUUC-Tgu-116720	Taeniopygia guttata	60.87	4.00e-88	319.00
IUUC-Tru-117977	Takifugu rubripes	66.96	1.00e-132	466.00
IUUC-Tsy-119121	Tarsius syrichta	90.41	7.00e-115	406.00
IUUC-Tni-119904	Tetraodon nigroviridis	69.64	1.00e-134	472.00
IUUC-Tca-121718	Theobroma cacao	40.64	1.00e-59	223.00
IUUC-Tae-124364	Triticum aestivum	37.19	7.00e-55	207.00
IUUC-Tme-126922	Tuber melanosporum	21.88	5.00e-12	66.20
IUUC-Tbe-127276	Tupaia belangeri	93.27	1.00e-157	548.00
IUUC-Uma-129505	Ustilago maydis	32.52	1.00e-13	70.90
IUUC-Vpa-130276	Vicugna pacos	96.02	7.00e-141	492.00
IUUC-Vvi-131377	Vitis vinifera	39.58	2.00e-57	218.00
IUUC-Xtr-132529	Xenopus tropicalis	67.13	2.00e-146	513.00
IUUC-Xma-134177	Xiphophorus maculatus	65.48	1.00e-124	439.00
IUUC-Yli-134665	Yarrowia lipolytica	23.42	2.00e-08	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence