iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022921

Ensembl Protein ID

EDP07372

UniProt Accession

A8I303; A8I303_CHLRE

Genbank Protein ID

EDP07372.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496112

Gene Name

CHLREDRAFT_97454

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_97454	EDP07372	EDP07372

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-13	47.5	114	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc.lafsdtllvsGsdDgtikvW 28
           gH +sv + +af+d++l++Gs Dg ++v 
   Q: 114  GHPESVQAlVAFDDDTLLTGSSDGAVRVV 142
           78888999458966999*********996 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

SVFASGDEEG LVLLWDSRAA KPIYRYTQHT DYITDMTLHA KDQCLVVTSG DATLSVHDLR 60
KRKARARSED DNDDELLSCC CVKGGKKVVA GTQSGVLHLY SWGYFNDCSD RFPGHPESVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGTGTTCG CCAGCGGGGA CGAGGAGGGG CTGGTGCTGC TGTGGGACAG CCGCGCAGCC 60
AAGCCCATCT ACCGGTACAC GCAGGTGAGC GTGTGTGTGT GTGTGTGTTT GTGCGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

cre:CHLREDRAFT_97454

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	44.86	1.00e-43	169.00
IUUC-Aml-001768	Ailuropoda melanoleuca	40.96	2.00e-37	149.00
IUUC-Atr-002865	Amborella trichopoda	50.63	6.00e-20	87.00
IUUC-Apl-003880	Anas platyrhynchos	39.04	4.00e-36	144.00
IUUC-Aca-005060	Anolis carolinensis	37.23	4.00e-34	138.00
IUUC-Aly-005629	Arabidopsis lyrata	50.00	3.00e-37	145.00
IUUC-Ath-006652	Arabidopsis thaliana	49.21	6.00e-47	179.00
IUUC-Acl-008007	Aspergillus clavatus	29.09	1.00e-07	48.90
IUUC-Afl-008723	Aspergillus flavus	32.12	5.00e-11	60.50
IUUC-Ang-009610	Aspergillus niger	35.80	4.00e-04	37.40
IUUC-Aor-009953	Aspergillus oryzae	32.12	5.00e-11	60.50
IUUC-Bta-013497	Bos taurus	38.83	5.00e-35	139.00
IUUC-Bci-013623	Botrytis cinerea	30.30	6.00e-07	47.00
IUUC-Bdi-014378	Brachypodium distachyon	46.28	4.00e-47	179.00
IUUC-Bol-016352	Brassica oleracea	48.15	2.00e-46	177.00
IUUC-Bra-017103	Brassica rapa	48.15	1.00e-46	178.00
IUUC-Cel-018192	Caenorhabditis elegans	25.76	4.00e-09	53.90
IUUC-Cja-018792	Callithrix jacchus	40.43	1.00e-36	145.00
IUUC-Cfa-020739	Canis familiaris	40.96	2.00e-37	149.00
IUUC-Cpo-022331	Cavia porcellus	40.96	6.00e-37	146.00
IUUC-Csa-023414	Chlorocebus sabaeus	39.89	4.00e-37	146.00
IUUC-Cho-024600	Choloepus hoffmanni	38.30	4.00e-33	133.00
IUUC-Cin-025565	Ciona intestinalis	34.74	4.00e-32	130.00
IUUC-Csv-026294	Ciona savignyi	37.37	4.00e-34	137.00
IUUC-Cne-026979	Cryptococcus neoformans	42.25	8.00e-38	149.00
IUUC-Cme-027192	Cyanidioschyzon merolae	30.69	1.00e-23	102.00
IUUC-Dre-028492	Danio rerio	38.30	2.00e-38	150.00
IUUC-Dno-030050	Dasypus novemcinctus	37.17	1.00e-29	123.00
IUUC-Dor-030386	Dipodomys ordii	31.38	1.00e-21	95.10
IUUC-Dse-031203	Dothistroma septosporum	29.08	3.00e-08	51.20
IUUC-Dme-032012	Drosophila melanogaster	33.33	6.00e-28	116.00
IUUC-Ete-032491	Echinops telfairi	40.96	2.00e-37	147.00
IUUC-Eca-033583	Equus caballus	41.49	1.00e-37	150.00
IUUC-Eeu-034976	Erinaceus europaeus	40.43	3.00e-37	147.00
IUUC-Fca-036417	Felis catus	41.18	1.00e-37	148.00
IUUC-Fox-038000	Fusarium oxysporum	36.62	4.00e-05	40.40
IUUC-Fso-038425	Fusarium solani	33.64	1.00e-06	46.20
IUUC-Gmo-039505	Gadus morhua	37.23	2.00e-35	140.00
IUUC-Ggr-039978	Gaeumannomyces graminis	35.90	1.00e-06	45.80
IUUC-Gga-040732	Gallus gallus	37.43	4.00e-35	140.00
IUUC-Gac-041313	Gasterosteus aculeatus	38.83	4.00e-36	143.00
IUUC-Gma-044122	Glycine max	47.09	4.00e-45	173.00
IUUC-Ggo-044748	Gorilla gorilla	40.43	5.00e-37	146.00
IUUC-Hsa-046943	Homo sapiens	39.89	4.00e-37	147.00
IUUC-Hvu-047659	Hordeum vulgare	45.74	1.00e-45	175.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	40.96	1.00e-36	145.00
IUUC-Lch-050331	Latimeria chalumnae	32.47	1.00e-25	108.00
IUUC-Lpe-051193	Leersia perrieri	50.00	1.00e-51	194.00
IUUC-Loc-051946	Lepisosteus oculatus	38.10	5.00e-35	140.00
IUUC-Lma-052960	Leptosphaeria maculans	29.90	2.00e-11	61.60
IUUC-Laf-054035	Loxodonta africana	39.89	8.00e-37	145.00
IUUC-Mcc-055285	Macaca mulatta	41.41	3.00e-23	99.40
IUUC-Meu-056596	Macropus eugenii	40.64	1.00e-36	145.00
IUUC-Mor-056995	Magnaporthe oryzae	30.07	2.00e-06	45.10
IUUC-Mpo-057482	Magnaporthe poae	35.90	1.00e-06	46.20
IUUC-Mtr-058587	Medicago truncatula	44.97	4.00e-44	170.00
IUUC-Mga-059839	Meleagris gallopavo	38.38	5.00e-35	141.00
IUUC-Mdo-062868	Monodelphis domestica	40.11	2.00e-35	142.00
IUUC-Mmu-064305	Mus musculus	39.89	4.00e-37	146.00
IUUC-Mac-065041	Musa acuminata	49.47	5.00e-50	189.00
IUUC-Mpu-066779	Mustela putorius furo	40.96	4.00e-38	150.00
IUUC-Mlu-067223	Myotis lucifugus	40.43	9.00e-36	143.00
IUUC-Nle-069852	Nomascus leucogenys	40.96	4.00e-38	150.00
IUUC-Ont-072452	Oreochromis niloticus	37.77	1.00e-35	142.00
IUUC-Oan-073163	Ornithorhynchus anatinus	42.99	5.00e-19	85.10
IUUC-Ocu-074628	Oryctolagus cuniculus	39.89	1.00e-36	145.00
IUUC-Oba-075868	Oryza barthii	48.40	1.00e-49	187.00
IUUC-Obr-076768	Oryza brachyantha	48.40	6.00e-50	189.00
IUUC-Ogl-077424	Oryza glaberrima	48.94	6.00e-50	189.00
IUUC-Ogu-078847	Oryza glumaepatula	48.94	6.00e-50	189.00
IUUC-Oin-079495	Oryza indica	48.94	6.00e-50	189.00
IUUC-Olo-080268	Oryza longistaminata	48.94	6.00e-50	189.00
IUUC-Ome-081709	Oryza meridionalis	47.90	2.00e-42	164.00
IUUC-Oni-082749	Oryza nivara	48.94	6.00e-50	189.00
IUUC-Opu-084023	Oryza punctata	35.11	5.00e-27	112.00
IUUC-Oru-084764	Oryza rufipogon	48.94	6.00e-50	189.00
IUUC-Osa-086009	Oryza sativa	48.94	7.00e-50	189.00
IUUC-Ola-086463	Oryzias latipes	35.05	9.00e-33	132.00
IUUC-Olu-087897	Ostreococcus lucimarinus	44.68	1.00e-44	172.00
IUUC-Oga-089114	Otolemur garnettii	39.89	3.00e-37	147.00
IUUC-Ptr-090556	Pan troglodytes	39.89	1.00e-36	144.00
IUUC-Pan-092828	Papio anubis	39.89	9.00e-37	145.00
IUUC-Psi-093609	Pelodiscus sinensis	38.99	5.00e-28	117.00
IUUC-Pma-094413	Petromyzon marinus	40.44	6.00e-29	119.00
IUUC-Ppa-095422	Physcomitrella patens	47.87	5.00e-48	182.00
IUUC-Pfo-096389	Poecilia formosa	37.77	2.00e-35	141.00
IUUC-Pab-098095	Pongo abelii	40.43	4.00e-37	146.00
IUUC-Pop-099612	Populus trichocarpa	44.44	9.00e-41	158.00
IUUC-Pca-100408	Procavia capensis	39.36	6.00e-36	142.00
IUUC-Ppe-101931	Prunus persica	47.09	5.00e-39	153.00
IUUC-Pva-102549	Pteropus vampyrus	41.49	7.00e-38	149.00
IUUC-Pte-104351	Pyrenophora teres	28.12	6.00e-08	51.60
IUUC-Pyt-104789	Pyrenophora triticirepentis	27.08	6.00e-09	53.50
IUUC-Rno-105079	Rattus norvegicus	40.43	2.00e-37	149.00
IUUC-Sha-107299	Sarcophilus harrisii	40.64	3.00e-35	142.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	39.38	6.00e-19	86.70
IUUC-Spo-108122	Schizosaccharomyces pombe	34.95	3.00e-23	100.00
IUUC-Smo-109673	Selaginella moellendorffii	50.00	7.00e-45	172.00
IUUC-Sit-110263	Setaria italica	50.00	6.00e-51	192.00
IUUC-Sly-110988	Solanum lycopersicum	47.09	1.00e-41	162.00
IUUC-Stu-112713	Solanum tuberosum	47.09	7.00e-42	162.00
IUUC-Sbi-114617	Sorghum bicolor	52.13	3.00e-52	197.00
IUUC-Sre-115136	Sporisorium reilianum	43.42	3.00e-23	101.00
IUUC-Ssc-116268	Sus scrofa	40.96	1.00e-36	146.00
IUUC-Tgu-116720	Taeniopygia guttata	35.25	6.00e-21	94.40
IUUC-Tru-117977	Takifugu rubripes	37.77	1.00e-35	141.00
IUUC-Tsy-119121	Tarsius syrichta	40.37	4.00e-30	123.00
IUUC-Tni-119904	Tetraodon nigroviridis	39.89	7.00e-36	142.00
IUUC-Tca-121718	Theobroma cacao	48.15	3.00e-46	177.00
IUUC-Tre-122059	Trichoderma reesei	38.03	2.00e-04	38.90
IUUC-Tae-124364	Triticum aestivum	45.74	3.00e-46	177.00
IUUC-Tme-126922	Tuber melanosporum	32.04	3.00e-10	58.50
IUUC-Tbe-127276	Tupaia belangeri	40.96	2.00e-38	150.00
IUUC-Uma-129505	Ustilago maydis	49.17	4.00e-25	107.00
IUUC-Vpa-130276	Vicugna pacos	38.39	2.00e-19	87.00
IUUC-Vvi-131377	Vitis vinifera	47.62	6.00e-46	177.00
IUUC-Xtr-132529	Xenopus tropicalis	38.30	5.00e-37	147.00
IUUC-Xma-134177	Xiphophorus maculatus	37.77	2.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence