iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lma-053023

Ensembl Protein ID

CBX98561

UniProt Accession

E5A4L3; E5A4L3_LEPMJ

Genbank Protein ID

CBX98561.1

Protein Name

Similar to RNA polymerase II Elongator subunit

Genbank Nucleotide ID

FP929134

Gene Name

LEMA_P078000.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LEMA_P078000.1	CBX98561	CBX98561

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-44	147.3	205	246
UBD/Beta-Prp	2.60e-55	187.0	23	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sdtllvsGsdDgtikvWDlrtgv 34
           gH++++++l+f        sd ll+s+s D+ i++W+l+ g+
   Q: 205  GHEGWIRALDFtretsdpkSDLLLASASQDKYIRLWRLHGGD 246
           8**************887766779*************98776 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk....ilvtgseDrtikvw.....dlstgkcvhtlkghedsvlslsfspsgdk 108
           +++s+l++ ++d+++ +wd ++gkl    + lsgh+++v+avkf ++g     il++gs D+ti++w     ++ +++cv+t++ h+  ++ ++  p ++ 
   Q: 23   EGGSQLLAFGADDCVALWDPQNGKLpgvQAVLSGHTKAVNAVKFYSTGTadvsILLSGSADNTIRIWrsqghSFAKFECVITITDHTGPITRIATLPGSNI 123
           56677777778****************88888**************9999999**************77777777**********************99** PP
   S: 109  lvsGshdrtirvwdletgqcl 129
           +++Gs+d  i++w+l ++  +
   Q: 124  IATGSSDGSIKIWQLAHDPGF 144
           *************99887655 PP

Organism

Leptosphaeria maculans

Protein Sequence
(Fasta)

MKLSSDFIST GGNRNPAAAD WDEGGSQLLA FGADDCVALW DPQNGKLPGV QAVLSGHTKA 60
VNAVKFYSTG TADVSILLSG SADNTIRIWR SQGHSFAKFE CVITITDHTG PITRIATLPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTAT CTTCCGACTT CATTTCCACA GGTGGGAATC GGAATCCTGC TGCCGCTGAT 60
TGGGATGAAG GTGGTAGCCA GCTGTTGGCT TTTGGTGCCG ATGACTGCGT CGCCCTTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	33.29	1.00e-89	322.00
IUUC-Aml-002049	Ailuropoda melanoleuca	31.43	4.00e-91	327.00
IUUC-Atr-002456	Amborella trichopoda	30.64	7.00e-95	340.00
IUUC-Apl-004053	Anas platyrhynchos	34.57	1.00e-103	369.00
IUUC-Aca-004535	Anolis carolinensis	32.87	5.00e-93	333.00
IUUC-Aly-005746	Arabidopsis lyrata	31.21	8.00e-95	340.00
IUUC-Ath-006664	Arabidopsis thaliana	31.42	3.00e-94	338.00
IUUC-Ago-007971	Ashbya gossypii	38.37	3.00e-144	504.00
IUUC-Acl-008173	Aspergillus clavatus	50.74	0.00e+00	766.00
IUUC-Afl-008665	Aspergillus flavus	47.39	6.00e-114	402.00
IUUC-Afu-008976	Aspergillus fumigatus	52.01	0.00e+00	774.00
IUUC-Ani-009284	Aspergillus nidulans	49.70	0.00e+00	742.00
IUUC-Ang-009809	Aspergillus niger	49.82	0.00e+00	748.00
IUUC-Aor-009959	Aspergillus oryzae	50.31	0.00e+00	751.00
IUUC-Ate-010442	Aspergillus terreus	49.57	0.00e+00	763.00
IUUC-Ame-011409	Astyanax mexicanus	33.03	2.00e-109	388.00
IUUC-Bgr-012137	Blumeria graminis	48.16	0.00e+00	692.00
IUUC-Bta-012892	Bos taurus	33.61	1.00e-107	382.00
IUUC-Bci-013944	Botrytis cinerea	53.18	0.00e+00	725.00
IUUC-Bdi-014512	Brachypodium distachyon	32.83	2.00e-95	342.00
IUUC-Bol-015741	Brassica oleracea	32.00	6.00e-104	370.00
IUUC-Bra-017367	Brassica rapa	31.68	5.00e-102	363.00
IUUC-Cel-018712	Caenorhabditis elegans	28.05	2.00e-67	249.00
IUUC-Cja-018865	Callithrix jacchus	31.61	3.00e-95	341.00
IUUC-Cfa-021006	Canis familiaris	33.80	3.00e-106	378.00
IUUC-Cpo-021370	Cavia porcellus	33.97	2.00e-106	378.00
IUUC-Csa-023845	Chlorocebus sabaeus	32.28	4.00e-104	370.00
IUUC-Cho-024640	Choloepus hoffmanni	31.37	4.00e-64	238.00
IUUC-Cin-025772	Ciona intestinalis	33.46	5.00e-104	370.00
IUUC-Csv-025891	Ciona savignyi	33.46	5.00e-104	370.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	51.35	0.00e+00	730.00
IUUC-Cne-027081	Cryptococcus neoformans	35.51	5.00e-105	374.00
IUUC-Cme-027225	Cyanidioschyzon merolae	26.93	6.00e-42	164.00
IUUC-Dre-028250	Danio rerio	32.75	4.00e-103	367.00
IUUC-Dno-028847	Dasypus novemcinctus	33.02	4.00e-106	377.00
IUUC-Dor-030351	Dipodomys ordii	33.06	3.00e-97	347.00
IUUC-Dse-031317	Dothistroma septosporum	51.35	0.00e+00	721.00
IUUC-Dme-032019	Drosophila melanogaster	32.36	2.00e-103	368.00
IUUC-Ete-033194	Echinops telfairi	28.99	1.00e-57	216.00
IUUC-Eca-033779	Equus caballus	32.88	6.00e-107	380.00
IUUC-Eeu-034790	Erinaceus europaeus	34.59	6.00e-58	217.00
IUUC-Fca-036090	Felis catus	33.75	5.00e-107	380.00
IUUC-Fal-037663	Ficedula albicollis	33.01	1.00e-101	362.00
IUUC-Fox-037828	Fusarium oxysporum	52.50	0.00e+00	750.00
IUUC-Fso-038462	Fusarium solani	55.37	0.00e+00	737.00
IUUC-Gmo-039450	Gadus morhua	31.85	5.00e-107	380.00
IUUC-Ggr-040023	Gaeumannomyces graminis	43.12	4.00e-180	623.00
IUUC-Gga-040480	Gallus gallus	33.66	2.00e-102	365.00
IUUC-Gac-041544	Gasterosteus aculeatus	32.88	7.00e-111	393.00
IUUC-Gma-044048	Glycine max	31.72	5.00e-99	353.00
IUUC-Ggo-045381	Gorilla gorilla	30.80	2.00e-91	328.00
IUUC-Hsa-046096	Homo sapiens	31.95	9.00e-96	343.00
IUUC-Hvu-047494	Hordeum vulgare	33.83	1.00e-96	346.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	29.38	3.00e-84	305.00
IUUC-Kpa-049241	Komagataella pastoris	35.16	7.00e-127	446.00
IUUC-Lch-050512	Latimeria chalumnae	30.35	2.00e-100	358.00
IUUC-Lpe-051448	Leersia perrieri	33.65	5.00e-96	343.00
IUUC-Loc-051882	Lepisosteus oculatus	33.10	8.00e-112	396.00
IUUC-Laf-054519	Loxodonta africana	34.12	4.00e-106	377.00
IUUC-Mcc-055580	Macaca mulatta	30.96	6.00e-99	353.00
IUUC-Meu-056606	Macropus eugenii	32.34	1.00e-27	116.00
IUUC-Mor-057109	Magnaporthe oryzae	47.18	0.00e+00	699.00
IUUC-Mpo-057297	Magnaporthe poae	42.47	4.00e-177	613.00
IUUC-Mtr-058348	Medicago truncatula	31.91	3.00e-97	347.00
IUUC-Mla-059159	Melampsora laricipopulina	29.89	8.00e-80	290.00
IUUC-Mga-059778	Meleagris gallopavo	31.30	3.00e-70	258.00
IUUC-Mvi-060447	Microbotryum violaceum	31.63	1.00e-94	339.00
IUUC-Mmr-061139	Microcebus murinus	31.47	1.00e-95	342.00
IUUC-Mdo-061866	Monodelphis domestica	31.32	2.00e-110	391.00
IUUC-Mmu-063390	Mus musculus	34.31	1.00e-106	379.00
IUUC-Mac-064693	Musa acuminata	34.14	1.00e-102	366.00
IUUC-Mpu-066547	Mustela putorius furo	33.38	6.00e-102	363.00
IUUC-Mlu-067156	Myotis lucifugus	32.33	4.00e-103	367.00
IUUC-Nfi-068616	Neosartorya fischeri	52.26	0.00e+00	783.00
IUUC-Ncr-068915	Neurospora crassa	44.01	0.00e+00	649.00
IUUC-Nle-069958	Nomascus leucogenys	32.71	3.00e-100	357.00
IUUC-Opr-071093	Ochotona princeps	29.57	9.00e-44	170.00
IUUC-Ont-072178	Oreochromis niloticus	32.56	3.00e-110	391.00
IUUC-Oan-073667	Ornithorhynchus anatinus	32.21	8.00e-103	366.00
IUUC-Ocu-074662	Oryctolagus cuniculus	33.56	6.00e-107	380.00
IUUC-Oba-075577	Oryza barthii	33.33	2.00e-99	355.00
IUUC-Obr-076566	Oryza brachyantha	33.93	5.00e-102	363.00
IUUC-Ogl-077054	Oryza glaberrima	33.47	4.00e-98	351.00
IUUC-Ogu-078846	Oryza glumaepatula	33.33	5.00e-99	353.00
IUUC-Oin-079084	Oryza indica	33.47	2.00e-100	358.00
IUUC-Olo-080933	Oryza longistaminata	30.63	3.00e-77	281.00
IUUC-Ome-081500	Oryza meridionalis	31.28	3.00e-84	304.00
IUUC-Oni-082352	Oryza nivara	33.20	1.00e-98	352.00
IUUC-Opu-084116	Oryza punctata	32.69	8.00e-96	343.00
IUUC-Oru-085249	Oryza rufipogon	33.47	2.00e-100	358.00
IUUC-Osa-086270	Oryza sativa	33.47	2.00e-100	358.00
IUUC-Ola-086625	Oryzias latipes	30.74	1.00e-89	323.00
IUUC-Olu-087638	Ostreococcus lucimarinus	30.25	6.00e-63	233.00
IUUC-Oga-088634	Otolemur garnettii	31.07	9.00e-90	323.00
IUUC-Oar-089475	Ovis aries	33.98	1.00e-107	382.00
IUUC-Ptr-091131	Pan troglodytes	32.28	7.00e-104	370.00
IUUC-Pan-092869	Papio anubis	32.79	2.00e-104	371.00
IUUC-Psi-093146	Pelodiscus sinensis	35.85	2.00e-94	338.00
IUUC-Pma-094479	Petromyzon marinus	34.99	2.00e-96	345.00
IUUC-Pno-095061	Phaeosphaeria nodorum	60.89	0.00e+00	854.00
IUUC-Ppa-095618	Physcomitrella patens	33.65	6.00e-93	334.00
IUUC-Pfo-096816	Poecilia formosa	32.95	1.00e-110	392.00
IUUC-Pab-097548	Pongo abelii	32.05	1.00e-104	372.00
IUUC-Pop-099643	Populus trichocarpa	32.55	6.00e-100	357.00
IUUC-Pca-100983	Procavia capensis	28.32	1.00e-43	170.00
IUUC-Ppe-101301	Prunus persica	34.15	4.00e-97	347.00
IUUC-Pva-102460	Pteropus vampyrus	32.33	2.00e-102	365.00
IUUC-Pgr-103507	Puccinia graminis	31.67	2.00e-83	301.00
IUUC-Ptt-103892	Puccinia triticina	30.95	7.00e-76	276.00
IUUC-Pte-104283	Pyrenophora teres	71.43	0.00e+00	1138.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	70.30	0.00e+00	1088.00
IUUC-Rno-105842	Rattus norvegicus	32.91	1.00e-106	379.00
IUUC-Sce-106459	Saccharomyces cerevisiae	38.56	7.00e-142	496.00
IUUC-Sha-106586	Sarcophilus harrisii	27.40	4.00e-65	241.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	38.57	3.00e-126	444.00
IUUC-Spo-108302	Schizosaccharomyces pombe	36.59	3.00e-124	437.00
IUUC-Smo-108919	Selaginella moellendorffii	30.33	2.00e-97	348.00
IUUC-Sit-109915	Setaria italica	33.79	4.00e-99	354.00
IUUC-Sly-111714	Solanum lycopersicum	31.49	2.00e-97	348.00
IUUC-Stu-112631	Solanum tuberosum	32.71	5.00e-98	350.00
IUUC-Sar-113200	Sorex araneus	29.73	2.00e-85	308.00
IUUC-Sbi-114582	Sorghum bicolor	32.31	7.00e-98	350.00
IUUC-Sre-115001	Sporisorium reilianum	28.52	4.00e-46	179.00
IUUC-Ssc-115519	Sus scrofa	33.51	8.00e-107	379.00
IUUC-Tgu-116987	Taeniopygia guttata	32.76	2.00e-95	341.00
IUUC-Tru-118476	Takifugu rubripes	32.01	7.00e-104	370.00
IUUC-Tsy-119230	Tarsius syrichta	34.27	6.00e-53	200.00
IUUC-Tni-120448	Tetraodon nigroviridis	23.90	3.00e-38	151.00
IUUC-Tca-121650	Theobroma cacao	34.41	3.00e-96	344.00
IUUC-Tre-122086	Trichoderma reesei	54.71	0.00e+00	724.00
IUUC-Tvi-122397	Trichoderma virens	52.92	0.00e+00	699.00
IUUC-Tae-123972	Triticum aestivum	33.92	4.00e-97	347.00
IUUC-Tur-126578	Triticum urartu	33.92	4.00e-97	347.00
IUUC-Tme-126927	Tuber melanosporum	45.82	3.00e-177	613.00
IUUC-Tbe-127922	Tupaia belangeri	40.47	3.00e-43	168.00
IUUC-Ttr-128918	Tursiops truncatus	33.06	8.00e-108	383.00
IUUC-Uma-129474	Ustilago maydis	28.65	1.00e-31	130.00
IUUC-Vda-129944	Verticillium dahliae	48.33	0.00e+00	682.00
IUUC-Vpa-130693	Vicugna pacos	33.43	3.00e-106	377.00
IUUC-Vvi-130949	Vitis vinifera	34.18	6.00e-98	350.00
IUUC-Xtr-132639	Xenopus tropicalis	31.66	3.00e-98	351.00
IUUC-Xma-134223	Xiphophorus maculatus	35.56	2.00e-73	268.00
IUUC-Yli-134601	Yarrowia lipolytica	40.25	1.00e-154	538.00
IUUC-Zma-135952	Zea mays	34.33	8.00e-99	353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence