iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099855

Ensembl Protein ID

POPTR_0002s05670.1

UniProt Accession

B9GSR3; B9GSR3_POPTR

Genbank Protein ID

EEE81400.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

XM_002302091.1; POPTR_0002s05670g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s05670	POPTR_0002s05670.1	POPTR_0002s05670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-11	45.0	314	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v+++++ +d + l++++   +++ WD+++g +l+
   Q: 314  GHQKPVSSVSWsPDdHQLLTCGVEEVVRRWDVSSGECLQ 352
           8***********77799********************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGVEDDEPA SKRLKLASGR LTGLSNGSSL TEPIVGSRDL MARPPQSEGD KDVLGSKGVI 60
KRVEFVRIIA KALHSLGYKK SCAHLEEESG IPLHSSAVDL FMQQVLNGNW DESVVTLHNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGATTTGCA GACCTCCTCG CCCCACTCCC TCTCTATCTA ATCCCCTCCA TGTCTCTCCA 60
TAACCCCATT CAGTTGGTTT CCTCAACGCA AAGAGTAAAC ATAACAAGAC CAAACCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

pop:POPTR_0002s05670g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cne-026805	Cryptococcus neoformans	25.51	1.00e-33	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence