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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Cel-018615
UUCD1 version UUC-CaE-00430
Ensembl Protein ID ZC302.2a
UniProt Accession Q23256; WDR53_CAEEL
Genbank Protein ID CAA98293.1
Protein Name WD repeat-containing protein wdr-5.3
Genbank Nucleotide ID Z73978
Gene Name wdr-5.3; swd-3.3; ZC302.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00013862 ZC302.2a ZC302.2a
Annotation
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.80e-47 156.1 295 333
UBD/Beta-Prp 3.20e-74 250.1 207 430
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gHt+ v+c++f + l++s++ D t++vWD++tg ++k
   Q: 295 GHTNYVFCCSFnPQsSLIASAGFDETVRVWDFKTGLCVK 333
    8**********95559********************986 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
    kt++gh ksv +++kfs +++l tgs+d+ ikvw++ ++++l++l +h+ ++++ ++s+++++++++s+D t+k++d+ +g c++t++gh+++v ++sf+
   Q: 207 KTISGHTKSV-SVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFN 306
    6788888865.55**************************************************************************************** PP
   S: 104 psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
    p+++ ++s++ d+t+rvwd +tg c++ + h++ +++++++ dgn ++++s+D+++r+Wd ++g++l+tl ++ +v+ + f++ngk+l+s+ ld+++
   Q: 307 PQSSLIASAGFDETVRVWDFKTGLCVK-CIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSL 406
    ***************************.********************************************888************************** PP
   S: 205 klwdlqtgecvrtlnghtdnvksv 228
    klwd ++ + ++ +ngh++ +++
   Q: 407 KLWDPKKAKPLKYYNGHKNKKYCL 430
    ********************9997 PP
   

Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description



     Not required for methylation of histone H3 'Lys-4'.
Not required for methylation of histone H3 'Lys-4'.
Protein Sequence
(Fasta)
MNPERQETIS PKNVPFQPVP TPNQQSLQSR MLESNQAVPD AFQKVAAWNH YNAVATPPIG 60
VPQTARPPSN QSPHPNPPGY PYQSHQQQFH PLAIAFQQPF GLPQQVIYPP PPPGFTPHRV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cel-018615|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATGAATCC CGAGCGGCAG GAAACAATAT CGCCGAAAAA TGTGCCGTTT CAGCCTGTTC 60
CTACGCCAAA TCAACAGAGT CTACAATCTC GCATGTTGGA ATCCAATCAA GCTGTTCCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cel-018615|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0044666--C:MLL3/4 complex

KEGG cel:CELE_ZC302.2
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Cre-022935 Chlamydomonas reinhardtii 38.67 6.00e-71 259.00
IUUC-Cne-027025 Cryptococcus neoformans 27.68 5.00e-46 177.00
Created Date 25-Jun-2017

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