iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095973

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544915

Gene Name

PHYPADRAFT_118820

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S26_271V6	PP1S26_271V6.1	PP1S26_271V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-10	39.2	1229	1263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htds.vtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ds v+++a    ++ ++++G+ Dg+++v+D+r+
   Q: 1229 HSDSyVSAMAAcqtHNSHVLTGCADGSVRVYDIRS 1263
           555435555534643389**************987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MALRDTVLCR ERCMDSMGGG HLGPLDAPHV VSTLPQNMIE DLSRRNQIED VLQLAEEDEG 60
RCANERGVSF LSNTSYLCDL RHDIDEASVA ASETGVVSRW RMKDRMKTGW VALCLCLNIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATTAA GAGATACAGT ACTTTGTAGG GAGCGGTGTA TGGATAGCAT GGGGGGAGGA 60
CACTTAGGTC CGCTCGATGC GCCGCATGTC GTTTCAACCC TTCCGCAGAA CATGATCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029030--Caspase-like_dom
IPR004083--Raptor
IPR029347--Raptor_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF14538--Raptor_N
PF00400--WD40

SMART

SM01302--Raptor_N
SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0031931--C:TORC1 complex
GO:0030674--F:protein binding, bridging
GO:0071230--P:cellular response to amino acid stimulus
GO:0009267--P:cellular response to starvation
GO:0030307--P:positive regulation of cell growth
GO:0071902--P:positive regulation of protein serine/threonine kinase activity
GO:0010506--P:regulation of autophagy
GO:0008361--P:regulation of cell size
GO:0031929--P:TOR signaling

KEGG

ppp:PHYPADRAFT_118820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022818	Chlamydomonas reinhardtii	69.07	7.00e-120	422.00
IUUC-Cne-027009	Cryptococcus neoformans	45.92	3.00e-174	605.00
IUUC-Cme-027253	Cyanidioschyzon merolae	58.71	2.00e-72	267.00
IUUC-Ete-032578	Echinops telfairi	75.51	2.00e-69	257.00
IUUC-Fox-037742	Fusarium oxysporum	46.41	8.00e-169	587.00
IUUC-Fso-038369	Fusarium solani	48.86	2.00e-163	569.00
IUUC-Mla-058907	Melampsora laricipopulina	39.26	3.00e-131	462.00
IUUC-Ncr-068744	Neurospora crassa	48.08	2.00e-166	579.00
IUUC-Ogu-078292	Oryza glumaepatula	50.67	1.00e-53	202.00
IUUC-Oni-082236	Oryza nivara	71.25	3.00e-98	352.00
IUUC-Pca-100579	Procavia capensis	46.02	1.00e-62	234.00
IUUC-Sce-106156	Saccharomyces cerevisiae	48.34	1.00e-104	374.00
IUUC-Spo-108057	Schizosaccharomyces pombe	52.14	0.00e+00	652.00
IUUC-Smo-109363	Selaginella moellendorffii	56.35	0.00e+00	1390.00
IUUC-Sre-115168	Sporisorium reilianum	42.18	2.00e-171	596.00
IUUC-Tre-122024	Trichoderma reesei	50.48	4.00e-163	568.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence