iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039942

Ensembl Protein ID

GGTG_10216T0

UniProt Accession

J3P9N9; J3P9N9_GAGT3

Genbank Protein ID

EJT73375.1

Protein Name

Pre-mRNA splicing factor

Genbank Nucleotide ID

ADBI01000836

Gene Name

GGTG_10216

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_10216	GGTG_10216T0	GGTG_10216T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-33	113.4	491	521
UBD/Beta-Prp	2.90e-53	180.5	207	438

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHt++v +++   d + +vsG++D t+k+W 
   Q: 491  GHTGPVASVDVsRDgKWIVSGGHDRTVKLWG 521
           8***********888***************6 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...........ilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           +   +sp+++++a+g + g++k++ + + +  r++ gh+++v+ +++ p +             +++g+  + i+ w+l+  +++ tl+gh+++v+ 
   Q: 207  SITRISPNGEFVAAGNWGGSVKLFTIPDLQETRTFRGHTNKVSGLSWFPGATlpesgvspdtvNMASGGAEGQIHMWSLNHDTPLATLSGHTQRVCR 303
           3336799**********************************777777777666666666666699999999************************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtdsvyslsfdsngk 193
           ++f+psg +l+s+s+d   r+wd+e++++l  +++gh++ v  v++++dg+ll+s++ D++ r+Wdl+tg+ +  l   + gh +++y l+++s+g 
   Q: 304  VEFHPSGRYLASASEDTSWRLWDVEKKTELL-LQEGHSRGVFAVSFNEDGSLLASAGQDSIGRVWDLRTGRTIFILdghQDGHIKPIYALDWSSDGY 399
           *******************************.********************************************999888*************** PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
           +++s+s dg +k wd+++ +      +ht+ v+++r ++
   Q: 400  RVMSASADGWIKCWDVRKAQRTGGIGAHTSAVSDMRWFK 438
           *********************************999875 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MSMVHPSRQA YVEEAESEKR GIDLSNIPVD YDYDVPTSGA GIASEKASVL MSQFERKRLA 60
ANIAVPTDDG RVRSRLREMG EPITLFGEGP ADRRDRLREL LMREKERERG GEAPGQDVDM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAACTGCA CAGGGTACTT CTAAGTGACT TCCTCTTGTC AGGGCATTTC AAGTGAAGCG 60
CATCCAAGTT CATGTGAGCG CGCGCACCTA CCTGCCTTCT GCGCGCGTCT TCGCCGTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	37.15	8.00e-77	279.00
IUUC-Aml-001737	Ailuropoda melanoleuca	36.86	3.00e-90	324.00
IUUC-Atr-002828	Amborella trichopoda	34.23	1.00e-76	278.00
IUUC-Apl-003723	Anas platyrhynchos	38.36	1.00e-91	328.00
IUUC-Aca-004972	Anolis carolinensis	36.13	2.00e-88	317.00
IUUC-Aly-006531	Arabidopsis lyrata	34.66	4.00e-63	234.00
IUUC-Ath-007367	Arabidopsis thaliana	35.77	2.00e-75	274.00
IUUC-Ago-007893	Ashbya gossypii	37.33	3.00e-72	264.00
IUUC-Acl-008236	Aspergillus clavatus	59.44	1.00e-170	591.00
IUUC-Afl-008522	Aspergillus flavus	61.67	2.00e-174	603.00
IUUC-Afu-008904	Aspergillus fumigatus	61.15	4.00e-175	606.00
IUUC-Ani-009198	Aspergillus nidulans	60.91	2.00e-177	613.00
IUUC-Ang-009662	Aspergillus niger	60.38	8.00e-173	598.00
IUUC-Aor-009881	Aspergillus oryzae	60.15	2.00e-172	597.00
IUUC-Ate-010333	Aspergillus terreus	60.79	9.00e-162	561.00
IUUC-Ame-011697	Astyanax mexicanus	36.49	4.00e-93	333.00
IUUC-Bgr-012254	Blumeria graminis	64.89	0.00e+00	686.00
IUUC-Bta-012615	Bos taurus	37.53	2.00e-90	325.00
IUUC-Bci-013720	Botrytis cinerea	67.11	0.00e+00	697.00
IUUC-Bdi-014302	Brachypodium distachyon	36.52	2.00e-81	295.00
IUUC-Bol-015594	Brassica oleracea	34.65	5.00e-65	240.00
IUUC-Bra-017465	Brassica rapa	34.65	3.00e-65	241.00
IUUC-Cel-018632	Caenorhabditis elegans	33.92	1.00e-67	248.00
IUUC-Cja-019747	Callithrix jacchus	36.86	2.00e-90	325.00
IUUC-Cfa-020288	Canis familiaris	36.86	2.00e-90	325.00
IUUC-Cpo-021440	Cavia porcellus	36.83	5.00e-90	323.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	34.55	5.00e-55	206.00
IUUC-Csa-023139	Chlorocebus sabaeus	36.03	3.00e-68	250.00
IUUC-Cho-024481	Choloepus hoffmanni	36.48	1.00e-83	301.00
IUUC-Cin-025106	Ciona intestinalis	36.74	1.00e-87	315.00
IUUC-Csv-026087	Ciona savignyi	37.16	3.00e-87	313.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	68.44	0.00e+00	744.00
IUUC-Cne-026793	Cryptococcus neoformans	43.43	4.00e-109	386.00
IUUC-Dre-028723	Danio rerio	38.43	2.00e-91	327.00
IUUC-Dno-029299	Dasypus novemcinctus	36.67	8.00e-90	322.00
IUUC-Dse-031562	Dothistroma septosporum	55.95	1.00e-161	561.00
IUUC-Dme-031783	Drosophila melanogaster	35.81	9.00e-76	276.00
IUUC-Ete-032669	Echinops telfairi	36.67	4.00e-90	323.00
IUUC-Eca-033566	Equus caballus	36.86	3.00e-90	323.00
IUUC-Eeu-034524	Erinaceus europaeus	41.84	7.00e-56	209.00
IUUC-Fca-036215	Felis catus	36.86	2.00e-90	324.00
IUUC-Fal-037018	Ficedula albicollis	39.69	4.00e-78	283.00
IUUC-Fox-037936	Fusarium oxysporum	72.81	0.00e+00	769.00
IUUC-Fso-038366	Fusarium solani	75.29	0.00e+00	800.00
IUUC-Gmo-038966	Gadus morhua	33.07	7.00e-57	212.00
IUUC-Gga-040797	Gallus gallus	38.16	5.00e-91	326.00
IUUC-Gac-042598	Gasterosteus aculeatus	35.22	4.00e-76	276.00
IUUC-Gma-044220	Glycine max	35.61	2.00e-71	261.00
IUUC-Ggo-044682	Gorilla gorilla	37.45	1.00e-91	328.00
IUUC-Hsa-045804	Homo sapiens	37.08	2.00e-91	328.00
IUUC-Hvu-047567	Hordeum vulgare	36.81	3.00e-73	267.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	36.67	4.00e-90	323.00
IUUC-Kpa-049369	Komagataella pastoris	34.87	3.00e-67	247.00
IUUC-Lch-050074	Latimeria chalumnae	35.95	4.00e-81	293.00
IUUC-Lpe-051333	Leersia perrieri	36.46	8.00e-77	279.00
IUUC-Loc-052164	Lepisosteus oculatus	37.06	6.00e-93	333.00
IUUC-Lma-053088	Leptosphaeria maculans	55.17	9.00e-170	588.00
IUUC-Laf-053460	Loxodonta africana	36.86	1.00e-90	325.00
IUUC-Mcc-055859	Macaca mulatta	36.86	2.00e-90	324.00
IUUC-Meu-056134	Macropus eugenii	36.47	5.00e-90	323.00
IUUC-Mor-057251	Magnaporthe oryzae	76.55	0.00e+00	778.00
IUUC-Mpo-057375	Magnaporthe poae	97.29	1.00e-149	520.00
IUUC-Mtr-058546	Medicago truncatula	32.66	6.00e-71	259.00
IUUC-Mla-059145	Melampsora laricipopulina	43.34	6.00e-100	355.00
IUUC-Mga-059855	Meleagris gallopavo	38.16	6.00e-91	326.00
IUUC-Mvi-060372	Microbotryum violaceum	39.75	1.00e-80	292.00
IUUC-Mmr-060826	Microcebus murinus	37.06	2.00e-90	324.00
IUUC-Mdo-062748	Monodelphis domestica	36.27	7.00e-90	322.00
IUUC-Mmu-063351	Mus musculus	36.67	6.00e-90	323.00
IUUC-Mac-064846	Musa acuminata	35.04	8.00e-71	259.00
IUUC-Mpu-066006	Mustela putorius furo	36.86	2.00e-90	324.00
IUUC-Mlu-067398	Myotis lucifugus	36.86	4.00e-90	323.00
IUUC-Nfi-068399	Neosartorya fischeri	61.15	0.00e+00	635.00
IUUC-Ncr-068711	Neurospora crassa	75.72	0.00e+00	808.00
IUUC-Nle-069982	Nomascus leucogenys	36.86	2.00e-90	325.00
IUUC-Opr-070596	Ochotona princeps	37.53	4.00e-90	323.00
IUUC-Ont-072374	Oreochromis niloticus	36.46	1.00e-83	301.00
IUUC-Oan-073166	Ornithorhynchus anatinus	36.27	4.00e-74	270.00
IUUC-Ocu-074371	Oryctolagus cuniculus	36.86	3.00e-90	324.00
IUUC-Oba-075083	Oryza barthii	35.96	7.00e-77	279.00
IUUC-Obr-076405	Oryza brachyantha	36.50	3.00e-76	277.00
IUUC-Ogl-077683	Oryza glaberrima	35.38	1.00e-76	279.00
IUUC-Ogu-078486	Oryza glumaepatula	35.38	3.00e-76	277.00
IUUC-Oin-079679	Oryza indica	35.38	4.00e-79	287.00
IUUC-Olo-080243	Oryza longistaminata	34.97	4.00e-64	236.00
IUUC-Ome-081230	Oryza meridionalis	35.31	2.00e-79	288.00
IUUC-Oni-082961	Oryza nivara	35.38	2.00e-79	287.00
IUUC-Opu-083189	Oryza punctata	35.77	2.00e-76	278.00
IUUC-Oru-084353	Oryza rufipogon	36.46	3.00e-78	284.00
IUUC-Osa-085458	Oryza sativa	35.31	2.00e-79	288.00
IUUC-Ola-086940	Oryzias latipes	37.29	3.00e-87	313.00
IUUC-Olu-087580	Ostreococcus lucimarinus	32.94	2.00e-51	194.00
IUUC-Oga-088703	Otolemur garnettii	34.71	2.00e-80	291.00
IUUC-Oar-089829	Ovis aries	37.53	5.00e-90	323.00
IUUC-Ptr-090838	Pan troglodytes	37.08	2.00e-91	328.00
IUUC-Pan-092261	Papio anubis	36.79	8.00e-89	319.00
IUUC-Psi-093020	Pelodiscus sinensis	37.32	2.00e-90	324.00
IUUC-Pno-094858	Phaeosphaeria nodorum	53.52	2.00e-156	543.00
IUUC-Ppa-095531	Physcomitrella patens	37.60	8.00e-86	309.00
IUUC-Pfo-096812	Poecilia formosa	34.06	3.00e-66	244.00
IUUC-Pab-097805	Pongo abelii	36.53	2.00e-68	251.00
IUUC-Pop-100051	Populus trichocarpa	32.33	5.00e-70	256.00
IUUC-Pca-100152	Procavia capensis	36.86	2.00e-90	324.00
IUUC-Ppe-101244	Prunus persica	36.23	4.00e-73	266.00
IUUC-Pva-102529	Pteropus vampyrus	35.69	7.00e-84	302.00
IUUC-Pgr-103550	Puccinia graminis	41.01	2.00e-104	371.00
IUUC-Ptt-103951	Puccinia triticina	40.67	9.00e-78	282.00
IUUC-Pte-104151	Pyrenophora teres	56.39	8.00e-165	572.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	56.20	4.00e-164	569.00
IUUC-Rno-105747	Rattus norvegicus	36.67	1.00e-89	322.00
IUUC-Sce-106418	Saccharomyces cerevisiae	32.35	4.00e-71	260.00
IUUC-Sha-107334	Sarcophilus harrisii	36.47	5.00e-90	323.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	37.33	8.00e-82	295.00
IUUC-Spo-108189	Schizosaccharomyces pombe	40.34	1.00e-90	325.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	67.24	0.00e+00	706.00
IUUC-Smo-108924	Selaginella moellendorffii	34.28	3.00e-78	284.00
IUUC-Sit-110102	Setaria italica	35.98	3.00e-79	287.00
IUUC-Sly-111668	Solanum lycopersicum	34.87	4.00e-71	260.00
IUUC-Stu-111928	Solanum tuberosum	34.87	3.00e-71	261.00
IUUC-Sar-113266	Sorex araneus	31.76	4.00e-69	253.00
IUUC-Sbi-114134	Sorghum bicolor	36.19	4.00e-79	287.00
IUUC-Sre-115114	Sporisorium reilianum	43.85	1.00e-105	375.00
IUUC-Ssc-115443	Sus scrofa	36.86	3.00e-90	324.00
IUUC-Tgu-117157	Taeniopygia guttata	37.53	8.00e-90	322.00
IUUC-Tru-118587	Takifugu rubripes	38.66	2.00e-88	317.00
IUUC-Tsy-119157	Tarsius syrichta	36.79	2.00e-74	271.00
IUUC-Tni-120427	Tetraodon nigroviridis	37.69	2.00e-89	321.00
IUUC-Tca-121368	Theobroma cacao	32.07	2.00e-73	268.00
IUUC-Tre-122074	Trichoderma reesei	73.57	0.00e+00	781.00
IUUC-Tvi-122349	Trichoderma virens	72.62	0.00e+00	770.00
IUUC-Tae-125651	Triticum aestivum	36.65	1.00e-77	282.00
IUUC-Tur-126532	Triticum urartu	39.02	1.00e-68	252.00
IUUC-Tme-126951	Tuber melanosporum	54.97	2.00e-155	540.00
IUUC-Tbe-128136	Tupaia belangeri	34.90	1.00e-79	288.00
IUUC-Ttr-129169	Tursiops truncatus	39.33	4.00e-55	207.00
IUUC-Uma-129399	Ustilago maydis	42.31	1.00e-102	365.00
IUUC-Vda-129842	Verticillium dahliae	70.91	0.00e+00	742.00
IUUC-Vpa-130440	Vicugna pacos	36.86	2.00e-90	325.00
IUUC-Vvi-131075	Vitis vinifera	34.87	3.00e-74	271.00
IUUC-Xma-133002	Xiphophorus maculatus	37.21	3.00e-67	247.00
IUUC-Yli-134569	Yarrowia lipolytica	35.38	3.00e-77	280.00
IUUC-Zma-135799	Zea mays	34.68	2.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence