iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-120605

Ensembl Protein ID

ENSTNIP00000005666.1

UniProt Accession

H3CBP4; H3CBP4_TETNG

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000003094.1	ENSTNIT00000005814.1	ENSTNIP00000005666.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-09	35.5	177	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvs.GsdDgtikvWDl 30
           gH++++t++af +d ++l++ ++ D  i  W +
   Q: 177  GHKGPITAVAFaPDgRYLATySNADSHISFWQM 209
           8***********999*****777********86 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MDVSAVLMGL LELCADAEKQ LANITMGLPL NPPADSARSA RHALSLIATA RPPAFITTIA 60
REVHRYNAAQ ANSQSQQNVH TTTLARAKTE ILRVIDILIE KMPGDVVDLL VEVMDIIMYC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTGT CGGCGGTCCT CATGGGGCTG CTGGAGCTCT GCGCCGATGC TGAGAAGCAG 60
CTGGCCAAGT GGGTCCGACA CACACACACA CGCACGCGCA CGCACACGCA CGCACAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004136	Anas platyrhynchos	90.55	1.00e-147	515.00
IUUC-Cel-018565	Caenorhabditis elegans	39.71	5.00e-54	206.00
IUUC-Cho-024612	Choloepus hoffmanni	88.36	7.00e-138	485.00
IUUC-Cne-026981	Cryptococcus neoformans	25.26	2.00e-14	75.10
IUUC-Meu-056091	Macropus eugenii	90.55	5.00e-146	512.00
IUUC-Mga-059383	Meleagris gallopavo	63.72	3.00e-72	265.00
IUUC-Pma-094170	Petromyzon marinus	73.82	7.00e-119	421.00
IUUC-Pca-100950	Procavia capensis	88.89	4.00e-131	462.00
IUUC-Ssc-115953	Sus scrofa	88.72	2.00e-67	247.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence