iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017008

Ensembl Protein ID

Bra003387.1-P

UniProt Accession

M4CGQ4; M4CGQ4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003387	Bra003387.1	Bra003387.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-41	139.1	87	125
UBD/Beta-Prp	2.80e-60	205.0	41	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ + +l++ sd   +vs+s D+t++ WD+ tg+++k
   Q: 87   GHKNAILDLHWtSDgLQIVSASPDKTLRAWDVETGKQVK 125
           8***********99788******************9986 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
            lsgh++++++++f+p g ++++gs Dr i +w +  ++k +++lkgh++ +l+l++  +g  +vs+s d+t+r wd+etg+ ++   ++h+++vn
   Q: 41   LLSGHQSAIYTMQFNPAGTVIASGSHDREIFLWRVHgDCKNFMVLKGHKNAILDLHWTSDGLQIVSASPDKTLRAWDVETGKQVK-KMAEHSSFVN 135
           58*******************************998799**********************************************.99******** PP
   S: 142  cvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnder 236
           + + +  g  l+vsGs+D+t +lWd+++   ++t+   ++ +++ +sf++    + +g+ d++vk+wdl++ge ++tl+gh+d+++ + +sp++ +
   Q: 136  SCCPSRRGlPLIVSGSDDGTAKLWDMRQRGAVQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEAIMTLEGHQDTITGMSLSPDGSY 229
           ***********************************5..8********************************************************* PP
   S: 237  lvsgssDgsiriWdlr....sgdllktlqlhnss 266
           l++ ++D  + +Wd+r    ++ ++k +++h+++
   Q: 230  LLTNAMDCKLCVWDMRpyapQNRCVKIFEGHQHN 263
           *************998555567888888888866 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDIVNRDNEP MEWSTVPYNA PQGPVSNGKQ RTSSLEAPIM LLSGHQSAIY TMQFNPAGTV 60
IASGSHDREI FLWRVHGDCK NFMVLKGHKN AILDLHWTSD GLQIVSASPD KTLRAWDVET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATTG TCAATAGAGA TAATGAGCCA ATGGAATGGT CCACTGTCCC TTACAACGCT 60
CCTCAAGGAC CTGTCTCCAA CGGCAAGCAA CGAACTTCGA GCTTGGAAGC GCCTATTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003164	Amborella trichopoda	82.62	1.00e-167	582.00
IUUC-Bci-013763	Botrytis cinerea	43.24	4.00e-88	317.00
IUUC-Bol-015154	Brassica oleracea	97.32	0.00e+00	688.00
IUUC-Cel-018512	Caenorhabditis elegans	52.12	2.00e-103	368.00
IUUC-Cin-025463	Ciona intestinalis	53.37	8.00e-112	396.00
IUUC-Cne-026780	Cryptococcus neoformans	40.38	2.00e-63	235.00
IUUC-Dme-031756	Drosophila melanogaster	54.72	3.00e-109	388.00
IUUC-Gmo-039383	Gadus morhua	59.68	1.00e-113	402.00
IUUC-Gma-044329	Glycine max	88.11	0.00e+00	629.00
IUUC-Kpa-049149	Komagataella pastoris	31.63	1.00e-34	139.00
IUUC-Mtr-058228	Medicago truncatula	85.41	3.00e-179	620.00
IUUC-Mvi-060285	Microbotryum violaceum	36.80	3.00e-56	212.00
IUUC-Mac-065463	Musa acuminata	76.76	8.00e-151	525.00
IUUC-Ppa-095728	Physcomitrella patens	78.96	1.00e-153	535.00
IUUC-Pop-099747	Populus trichocarpa	83.19	2.00e-178	617.00
IUUC-Sly-111567	Solanum lycopersicum	83.44	4.00e-168	583.00
IUUC-Stu-112562	Solanum tuberosum	83.54	2.00e-170	590.00
IUUC-Tca-121373	Theobroma cacao	86.01	0.00e+00	629.00
IUUC-Vvi-131202	Vitis vinifera	87.12	2.00e-177	614.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence