iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100045

UUCD1 version

UUC-PoT-00954

Ensembl Protein ID

POPTR_0002s22430.1

UniProt Accession

A9PHH9; A9PHH9_POPTR

Genbank Protein ID

ABK95832.1; EEE82105.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EF147831; CM000338

Gene Name

POPTR_0002s22430g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s22430	POPTR_0002s22430.1	POPTR_0002s22430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-31	106.8	272	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++++++Gs D+t+k++D+r+
   Q: 272  HQSEVNCLAFnpfNEWIVATGSTDKTVKLFDIRK 305
           9**********9777****************875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGKDEEEMRG EIEERLINEE YKIWKKNTPF LYDLVITHAL EWPSLTVEWL PDRDEPPGKD 60
YSVQKMILGT HTSENEPNYL MLAQVQLPLD DAENDARHYD DDRSDFGGFG AANGKVQIIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCAACAAT TTCGAAGTAA TCAATCGATT CTGTTAGTCA TTCACTCACC GCTCACTCGT 60
ATACTTGTAT AAACCTCCCG GGCTTGGTGC TAGGGTTTGT TTTTCTTTTG CTATATAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0002s22430g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007892	Ashbya gossypii	36.50	4.00e-70	258.00
IUUC-Bdi-014926	Brachypodium distachyon	87.32	0.00e+00	763.00
IUUC-Cne-026792	Cryptococcus neoformans	50.88	1.00e-124	439.00
IUUC-Dse-031282	Dothistroma septosporum	44.59	3.00e-98	352.00
IUUC-Eeu-034644	Erinaceus europaeus	62.78	3.00e-80	291.00
IUUC-Ogu-078048	Oryza glumaepatula	75.00	0.00e+00	654.00
IUUC-Oin-079960	Oryza indica	72.57	8.00e-178	615.00
IUUC-Olo-080553	Oryza longistaminata	71.92	0.00e+00	644.00
IUUC-Oni-082494	Oryza nivara	74.76	0.00e+00	650.00
IUUC-Sce-106364	Saccharomyces cerevisiae	35.35	2.00e-66	245.00
IUUC-Tca-121841	Theobroma cacao	93.87	0.00e+00	816.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence