iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007605

Ensembl Protein ID

AT1G24290.1

UniProt Accession

O48696; O48696_ARATH

Genbank Protein ID

AAC00592.1; AEE30512.1

Protein Name

AAA-type ATPase family protein; F3I6.23 protein

Genbank Nucleotide ID

AC002396; CP002684

Gene Name

At1g24290; F3I6.23; F3I6_23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G24290	AT1G24290.1	AT1G24290.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-07	32.7	1	36

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 7    leqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           +eqlv+MGF+ ++a +aL a+ + +++ A++++l++
   Q: 1    MEQLVSMGFSSDLAAEALTATgGDSIQKATDWILSH 36
           59********************************97 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEQLVSMGFS SDLAAEALTA TGGDSIQKAT DWILSHRSSP QSTATLQPKL DRFLRLHPKA 60
LAPAMGDDSS KRPNPKTQIH VAADDSNKRH KLSSSSHRQH QPLSERMRPR TLDDVVGQDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCATGCTA TTGCTAACTA AGACAGCTTT GGTGTTTTTC ACAGTAGAAG TAGAAGATGG 60
AGCAGCTAGT GAGCATGGGT TTCTCCAGCG ATTTGGCCGC CGAGGCTTTA ACGGCCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003593--AAA+_ATPase
IPR032423--AAA_assoc_2
IPR003959--ATPase_AAA_core
IPR008921--DNA_pol3_clamp-load_cplx_C
IPR021886--MgsA_C
IPR027417--P-loop_NTPase
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF00004--AAA
PF16193--AAA_assoc_2
PF12002--MgsA_C
PF00627--UBA

SMART

SM00382--AAA
SM00165--UBA

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0006260--P:DNA replication

KEGG

ath:AT1G24290

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002134	Ailuropoda melanoleuca	50.34	2.00e-117	416.00
IUUC-Atr-002635	Amborella trichopoda	45.30	1.00e-125	442.00
IUUC-Apl-003962	Anas platyrhynchos	50.90	5.00e-117	413.00
IUUC-Aca-005219	Anolis carolinensis	50.43	1.00e-96	345.00
IUUC-Aly-005664	Arabidopsis lyrata	94.29	0.00e+00	1005.00
IUUC-Ago-007747	Ashbya gossypii	43.71	2.00e-92	332.00
IUUC-Acl-008260	Aspergillus clavatus	47.82	2.00e-98	352.00
IUUC-Afl-008493	Aspergillus flavus	45.51	7.00e-102	363.00
IUUC-Afu-008892	Aspergillus fumigatus	48.54	2.00e-98	352.00
IUUC-Ani-009289	Aspergillus nidulans	48.54	2.00e-101	362.00
IUUC-Ang-009599	Aspergillus niger	48.43	8.00e-100	356.00
IUUC-Aor-009987	Aspergillus oryzae	45.51	3.00e-102	364.00
IUUC-Ate-010577	Aspergillus terreus	48.43	5.00e-100	357.00
IUUC-Ame-010756	Astyanax mexicanus	33.41	2.00e-55	209.00
IUUC-Bgr-012158	Blumeria graminis	45.88	2.00e-96	345.00
IUUC-Bta-013537	Bos taurus	50.80	2.00e-116	411.00
IUUC-Bci-013965	Botrytis cinerea	46.12	5.00e-103	367.00
IUUC-Bol-015473	Brassica oleracea	83.15	0.00e+00	843.00
IUUC-Bra-017208	Brassica rapa	83.64	0.00e+00	836.00
IUUC-Cja-019193	Callithrix jacchus	50.11	1.00e-117	416.00
IUUC-Cfa-020149	Canis familiaris	50.34	1.00e-117	415.00
IUUC-Cpo-021486	Cavia porcellus	50.34	1.00e-118	419.00
IUUC-Csa-024006	Chlorocebus sabaeus	51.02	7.00e-118	417.00
IUUC-Cho-024632	Choloepus hoffmanni	43.19	2.00e-78	285.00
IUUC-Cne-026982	Cryptococcus neoformans	45.77	7.00e-74	270.00
IUUC-Dre-027822	Danio rerio	52.44	5.00e-123	434.00
IUUC-Dno-029727	Dasypus novemcinctus	51.72	2.00e-119	422.00
IUUC-Dor-030227	Dipodomys ordii	48.84	3.00e-95	342.00
IUUC-Dse-031247	Dothistroma septosporum	46.45	3.00e-96	345.00
IUUC-Ete-033089	Echinops telfairi	48.95	4.00e-114	404.00
IUUC-Eca-033998	Equus caballus	51.31	1.00e-103	369.00
IUUC-Eeu-035147	Erinaceus europaeus	50.34	7.00e-118	416.00
IUUC-Fca-036247	Felis catus	51.31	6.00e-103	367.00
IUUC-Fal-037605	Ficedula albicollis	50.26	6.00e-103	366.00
IUUC-Fox-038016	Fusarium oxysporum	47.92	2.00e-91	328.00
IUUC-Fso-038200	Fusarium solani	48.93	3.00e-94	338.00
IUUC-Gmo-039155	Gadus morhua	47.26	7.00e-97	347.00
IUUC-Ggr-040037	Gaeumannomyces graminis	44.33	9.00e-97	347.00
IUUC-Gga-041277	Gallus gallus	50.55	5.00e-119	421.00
IUUC-Gac-042576	Gasterosteus aculeatus	48.51	4.00e-116	410.00
IUUC-Gma-043574	Glycine max	64.94	0.00e+00	665.00
IUUC-Ggo-045359	Gorilla gorilla	50.46	3.00e-116	411.00
IUUC-Hsa-045689	Homo sapiens	50.11	9.00e-117	413.00
IUUC-Itr-048239	Ictidomys tridecemlineatus	50.34	7.00e-118	417.00
IUUC-Kpa-049277	Komagataella pastoris	43.30	1.00e-87	316.00
IUUC-Lch-049430	Latimeria chalumnae	50.29	3.00e-45	174.00
IUUC-Loc-052461	Lepisosteus oculatus	50.12	1.00e-118	419.00
IUUC-Lma-053060	Leptosphaeria maculans	46.84	3.00e-90	325.00
IUUC-Laf-053418	Loxodonta africana	50.11	9.00e-118	416.00
IUUC-Mcc-055094	Macaca mulatta	50.34	2.00e-117	416.00
IUUC-Meu-056838	Macropus eugenii	45.32	1.00e-73	270.00
IUUC-Mor-057036	Magnaporthe oryzae	48.22	1.00e-95	343.00
IUUC-Mtr-057969	Medicago truncatula	63.57	0.00e+00	685.00
IUUC-Mla-059065	Melampsora laricipopulina	41.10	2.00e-80	292.00
IUUC-Mga-059360	Meleagris gallopavo	52.59	4.00e-114	404.00
IUUC-Mmr-060962	Microcebus murinus	49.89	3.00e-117	415.00
IUUC-Mdo-062007	Monodelphis domestica	50.47	2.00e-118	419.00
IUUC-Mmu-063806	Mus musculus	49.89	4.00e-117	414.00
IUUC-Mac-064594	Musa acuminata	55.84	8.00e-59	220.00
IUUC-Mpu-066476	Mustela putorius furo	50.57	2.00e-118	419.00
IUUC-Mlu-067439	Myotis lucifugus	48.48	3.00e-107	381.00
IUUC-Nfi-068391	Neosartorya fischeri	43.41	5.00e-98	350.00
IUUC-Ncr-068746	Neurospora crassa	46.40	3.00e-96	345.00
IUUC-Nle-069387	Nomascus leucogenys	50.34	1.00e-117	416.00
IUUC-Opr-070903	Ochotona princeps	52.42	5.00e-31	128.00
IUUC-Ont-071546	Oreochromis niloticus	47.48	4.00e-116	410.00
IUUC-Oan-073696	Ornithorhynchus anatinus	50.74	3.00e-94	337.00
IUUC-Ocu-074768	Oryctolagus cuniculus	49.89	6.00e-118	416.00
IUUC-Oin-079459	Oryza indica	47.31	6.00e-83	301.00
IUUC-Ola-087403	Oryzias latipes	48.97	1.00e-118	419.00
IUUC-Oga-088904	Otolemur garnettii	50.57	2.00e-118	419.00
IUUC-Oar-089703	Ovis aries	43.86	6.00e-46	176.00
IUUC-Ptr-090666	Pan troglodytes	50.11	1.00e-116	413.00
IUUC-Pan-092020	Papio anubis	51.31	1.00e-103	369.00
IUUC-Psi-092949	Pelodiscus sinensis	49.77	1.00e-117	416.00
IUUC-Pma-094432	Petromyzon marinus	39.74	4.00e-65	241.00
IUUC-Pno-095095	Phaeosphaeria nodorum	45.33	3.00e-96	345.00
IUUC-Ppa-095376	Physcomitrella patens	70.90	3.00e-76	279.00
IUUC-Pfo-096882	Poecilia formosa	49.54	3.00e-119	421.00
IUUC-Pab-098159	Pongo abelii	50.34	3.00e-117	415.00
IUUC-Pop-098867	Populus trichocarpa	64.34	0.00e+00	687.00
IUUC-Pca-100549	Procavia capensis	50.57	8.00e-119	420.00
IUUC-Pva-102427	Pteropus vampyrus	50.34	6.00e-116	410.00
IUUC-Pgr-103584	Puccinia graminis	43.18	2.00e-91	329.00
IUUC-Ptt-103965	Puccinia triticina	50.18	6.00e-57	213.00
IUUC-Pte-104110	Pyrenophora teres	47.33	2.00e-96	345.00
IUUC-Pyt-104578	Pyrenophora triticirepentis	47.57	6.00e-96	343.00
IUUC-Rno-106096	Rattus norvegicus	50.57	3.00e-118	418.00
IUUC-Sce-106299	Saccharomyces cerevisiae	41.70	4.00e-94	338.00
IUUC-Sha-106678	Sarcophilus harrisii	49.78	7.00e-121	426.00
IUUC-Sja-107709	Schizosaccharomyces japonicus	46.49	1.00e-97	349.00
IUUC-Spo-108286	Schizosaccharomyces pombe	46.28	2.00e-98	352.00
IUUC-Smo-109453	Selaginella moellendorffii	55.88	3.00e-143	501.00
IUUC-Sly-111329	Solanum lycopersicum	63.18	0.00e+00	682.00
IUUC-Stu-112498	Solanum tuberosum	63.03	0.00e+00	693.00
IUUC-Sre-115000	Sporisorium reilianum	40.68	2.00e-92	332.00
IUUC-Ssc-115336	Sus scrofa	50.57	7.00e-117	413.00
IUUC-Tgu-116596	Taeniopygia guttata	50.67	5.00e-120	424.00
IUUC-Tru-117850	Takifugu rubripes	47.25	1.00e-114	406.00
IUUC-Tsy-118903	Tarsius syrichta	51.85	2.00e-85	308.00
IUUC-Tni-120817	Tetraodon nigroviridis	49.89	1.00e-116	412.00
IUUC-Tca-121843	Theobroma cacao	67.02	0.00e+00	730.00
IUUC-Tre-121913	Trichoderma reesei	48.96	2.00e-97	349.00
IUUC-Tvi-122613	Trichoderma virens	48.12	3.00e-95	342.00
IUUC-Tme-127063	Tuber melanosporum	46.47	3.00e-91	328.00
IUUC-Tbe-127342	Tupaia belangeri	39.79	1.00e-63	236.00
IUUC-Ttr-128381	Tursiops truncatus	50.90	1.00e-103	369.00
IUUC-Uma-129504	Ustilago maydis	44.13	2.00e-94	339.00
IUUC-Vda-129930	Verticillium dahliae	45.67	2.00e-90	325.00
IUUC-Vvi-130851	Vitis vinifera	65.11	0.00e+00	664.00
IUUC-Xtr-131772	Xenopus tropicalis	40.07	6.00e-48	184.00
IUUC-Xma-133802	Xiphophorus maculatus	49.20	4.00e-118	417.00
IUUC-Yli-134331	Yarrowia lipolytica	48.39	3.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence