iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043183

UUCD1 version

UUC-GlM-03480

Ensembl Protein ID

GLYMA07G07540.1

UniProt Accession

Q9SPB9; Q9SPB9_SOYBN

Genbank Protein ID

AAF03236.1; KRH48110.1

Protein Name

Ubiquitin carrier protein 4

Genbank Nucleotide ID

AF180143; CM000840

Gene Name

UBC4; GLYMA_07G069300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G07540	GLYMA07G07540.1	GLYMA07G07540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.20e-33	117.4	11	141

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 8    elekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspalsves 100
           +l+k  ++ +++++ ++  ++e+ v + Gp+++pY+ggv+k+++e+p+ YP+k+P++ f++ki+hPnv+e  G+vCl++++  ++Wsp+ ++ +
   Q: 11   DLMKLMMSDYKVEMIND-GMQEFYVHFHGPNESPYHGGVWKVRVELPDAYPYKSPSIGFINKIYHPNVDEMsGSVCLDVIN--QTWSPMFDLVN 101
           56677788899999999.7***************************************************99********9..*********** PP
   S: 101  vl.lsiqsllaepnpesplneeaaellkknreeykkkvre 139
           v+ + + +ll  pnp++pln eaa l+ ++r++y+++v+e
   Q: 102  VFeVFLPQLLLYPNPSDPLNGEAAALMMRDRATYEQRVKE 141
           **889********************************985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSPSKRREM DLMKLMMSDY KVEMINDGMQ EFYVHFHGPN ESPYHGGVWK VRVELPDAYP 60
YKSPSIGFIN KIYHPNVDEM SGSVCLDVIN QTWSPMFDLV NVFEVFLPQL LLYPNPSDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTATCTGAT TTTTATTATC TGAGTTCTGG TTTTGCTTAT TACTGTCTGA ACCAATTTTA 60
CCTCTTCAAG TTGCACAAGC AAAGTTCTCC CTCAATCCTC TTCTCTCTCT CTCTCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:548025

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aor-010201	Aspergillus oryzae	60.61	1.00e-56	212.00
IUUC-Cne-027006	Cryptococcus neoformans	67.16	4.00e-57	214.00
IUUC-Fso-038148	Fusarium solani	63.27	5.00e-55	206.00
IUUC-Ggr-039749	Gaeumannomyces graminis	62.35	3.00e-57	214.00
IUUC-Mtr-058579	Medicago truncatula	94.59	2.00e-91	328.00
IUUC-Ome-081586	Oryza meridionalis	80.51	3.00e-81	294.00
IUUC-Spo-108105	Schizosaccharomyces pombe	70.20	4.00e-66	243.00
IUUC-Ssl-108543	Sclerotinia sclerotiorum	62.75	8.00e-56	209.00
IUUC-Smo-108956	Selaginella moellendorffii	80.33	6.00e-87	312.00
IUUC-Sre-115027	Sporisorium reilianum	71.61	6.00e-69	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence