iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109465

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377642

Gene Name

SELMODRAFT_40849

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_40849	EFJ12054	EFJ12054

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-06	27.4	601	653
E3 activity/RING/RING	1.90e-06	29.0	605	644

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlv 56
           ++f CpI l ++    ++ + +++ r++Iek l++++++cP++r  lt +d+ 
   Q: 601  DDFDCPICLSPPVTAIITRCAHVFCRRCIEKTLERDKRQCPMCRGDLTISDIY 653
           79*********************************************999884 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ +  ++++C Hvf++ C++k      +++ + +CP Cr
   Q: 605  CPICLSPPVT-AIITRCAHVFCRRCIEKT-----LERDKRQCPMCR 644
           ********99.889************555.....599999*****8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

AEAILVGCLT VNVVGLRYYH GTVTNGEMVQ LVREPTNPYD SNAIRVLNIR GDQVGHVEKN 60
KAMHLAPLVD QNLAFLEGIV PSGSKNAYRM PCQVHVFSKP ALAAAVVDHL DYFGERLSGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGAAGCGA TCCTGGTGGG TTGTCTCACG GTTAACGTTG TGGGTCTGCG GTACTACCAC 60
GGCACGGTGA CCAACGGCGA GATGGTCCAG CTTGTCCGAG AGCCCACCAA TCCATACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR030065--HLTF
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016887--F:ATPase activity
GO:0003676--F:nucleic acid binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006301--P:postreplication repair
GO:0000209--P:protein polyubiquitination
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

smo:SELMODRAFT_40849

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005898	Arabidopsis lyrata	45.01	0.00e+00	715.00
IUUC-Ath-007559	Arabidopsis thaliana	44.42	0.00e+00	710.00
IUUC-Ani-009435	Aspergillus nidulans	34.87	4.00e-98	352.00
IUUC-Ame-011743	Astyanax mexicanus	42.51	3.00e-121	429.00
IUUC-Bgr-012147	Blumeria graminis	31.70	6.00e-96	345.00
IUUC-Bdi-014267	Brachypodium distachyon	42.61	0.00e+00	667.00
IUUC-Bol-016075	Brassica oleracea	43.85	0.00e+00	704.00
IUUC-Bra-017057	Brassica rapa	44.12	0.00e+00	712.00
IUUC-Cne-026829	Cryptococcus neoformans	32.82	2.00e-113	402.00
IUUC-Dre-027867	Danio rerio	41.81	8.00e-123	434.00
IUUC-Dor-030590	Dipodomys ordii	41.46	1.00e-64	240.00
IUUC-Fal-037486	Ficedula albicollis	28.63	7.00e-71	261.00
IUUC-Gmo-038544	Gadus morhua	42.20	1.00e-124	440.00
IUUC-Gac-042401	Gasterosteus aculeatus	41.92	2.00e-127	449.00
IUUC-Lch-050617	Latimeria chalumnae	43.93	3.00e-130	458.00
IUUC-Loc-052785	Lepisosteus oculatus	43.84	1.00e-131	463.00
IUUC-Lma-052956	Leptosphaeria maculans	32.28	5.00e-95	342.00
IUUC-Mtr-058172	Medicago truncatula	41.39	0.00e+00	666.00
IUUC-Ont-071782	Oreochromis niloticus	42.50	4.00e-123	435.00
IUUC-Oba-075881	Oryza barthii	40.72	0.00e+00	628.00
IUUC-Ogl-076957	Oryza glaberrima	40.72	0.00e+00	628.00
IUUC-Oin-079449	Oryza indica	40.72	2.00e-176	611.00
IUUC-Olo-080721	Oryza longistaminata	42.67	1.00e-156	546.00
IUUC-Ome-081579	Oryza meridionalis	40.46	4.00e-175	607.00
IUUC-Oni-083054	Oryza nivara	40.72	2.00e-176	611.00
IUUC-Oru-085259	Oryza rufipogon	40.72	3.00e-176	611.00
IUUC-Osa-085568	Oryza sativa	40.62	2.00e-166	578.00
IUUC-Psi-093626	Pelodiscus sinensis	44.31	2.00e-127	449.00
IUUC-Pno-094916	Phaeosphaeria nodorum	31.54	3.00e-93	336.00
IUUC-Ppa-095291	Physcomitrella patens	52.85	0.00e+00	889.00
IUUC-Pfo-096540	Poecilia formosa	42.03	4.00e-123	434.00
IUUC-Pop-099141	Populus trichocarpa	36.38	2.00e-141	495.00
IUUC-Ppe-102077	Prunus persica	39.98	1.00e-168	586.00
IUUC-Pte-104242	Pyrenophora teres	31.50	4.00e-95	342.00
IUUC-Sce-106396	Saccharomyces cerevisiae	27.98	3.00e-75	276.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	30.23	9.00e-88	317.00
IUUC-Tni-120618	Tetraodon nigroviridis	41.84	6.00e-128	451.00
IUUC-Vvi-131204	Vitis vinifera	43.94	0.00e+00	715.00
IUUC-Xtr-132730	Xenopus tropicalis	44.57	2.00e-131	462.00
IUUC-Xma-133384	Xiphophorus maculatus	41.94	7.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence