iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-063023

UUCD1 version

UUC-MoD-00456

Ensembl Protein ID

ENSMODP00000006461.2

UniProt Accession

F6YN06; F6YN06_MONDO

Protein Name

Uncharacterized protein

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000005243.3	ENSMODT00000006596.3	ENSMODP00000006461.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-46	152.0	589	627
UBD/Beta-Prp	1.50e-95	320.0	38	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v c++  sd  l+++Gs D ++k+W l+ g++ +
   Q: 589  GHKLPVLCMDIsSDgALIATGSADRNVKIWGLDFGDCHR 627
           79999*******99899*******************977 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           ++a+    + + +wd+++g ++  l+g + evt+++ spdg  l  g eD+ i++++l +g+  +t++gh++ v++ls+++ g +lvsG
   Q: 38   YVAVPA-CEHVFIWDIRKGEKILILQGLKHEVTCLCPSPDGLHLSVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTALSYDQLGGRLVSG 125
           444443.4566677777777777777777778888888877777777777788888777777777888888888888887777778888 PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
           s+d  + vwd+ +++ l+  l+gh+++++ v +  ++nll+++++D++v++Wdl t+ + +t+ g h   v  + + s+ k+l++gs d
   Q: 126  SKDTDVIVWDVINESGLY-RLKGHKDAITQVLFLREKNLLITSGKDTVVKWWDLDTQHCFKTMVG-HRTEVWGMVLVSEEKRLITGSAD 212
           887777788877777777.7777777777777777777778888888888888888888888777.77777777777777778888888 PP
   S: 202  gtvklwdlq................tgecvrtlnghtdnvksvrfs.pnderlvsgssDgs 245
           + ++ wd+                 +g+ + t+++h++ + +  ++ + ++r++s+++ gs
   Q: 213  SELRAWDITyieelkdlgepnskksRGSSLGTQENHETETGDPGVDeDPEDRILSCNKAGS 273
           8888887777777777777776666666677777777777777777555666777666665 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DIRKGEKILI 60
LQGLKHEVTC LCPSPDGLHL SVGYEDGSIR IFSLLSGEGN VTFNGHKAAV TALSYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAGCGGAG CCGGAAGGAG CGGGCCAAAC TGAGGAGAGA TACTTGGGAC CTCGCGTGGA 60
GTCGAGTGTT CTTAATCTGC TGCTTTAGTA GTCTTTCGCT CCTCCGACCC CCAGGTGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

mdo:100012000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.18	8.00e-150	524.00
IUUC-Aml-001245	Ailuropoda melanoleuca	87.78	0.00e+00	1582.00
IUUC-Atr-002700	Amborella trichopoda	39.02	5.00e-176	611.00
IUUC-Apl-004164	Anas platyrhynchos	76.85	0.00e+00	1054.00
IUUC-Aca-004765	Anolis carolinensis	74.78	0.00e+00	1366.00
IUUC-Aly-006503	Arabidopsis lyrata	39.83	3.00e-178	619.00
IUUC-Ath-006848	Arabidopsis thaliana	39.70	1.00e-179	623.00
IUUC-Ago-007909	Ashbya gossypii	34.63	5.00e-145	508.00
IUUC-Acl-008238	Aspergillus clavatus	37.54	4.00e-177	615.00
IUUC-Afl-008544	Aspergillus flavus	37.69	2.00e-172	599.00
IUUC-Afu-008868	Aspergillus fumigatus	37.57	6.00e-175	608.00
IUUC-Ani-009367	Aspergillus nidulans	37.10	2.00e-170	593.00
IUUC-Ang-009732	Aspergillus niger	38.30	2.00e-177	616.00
IUUC-Aor-010140	Aspergillus oryzae	37.76	6.00e-173	601.00
IUUC-Ate-010572	Aspergillus terreus	37.45	8.00e-173	601.00
IUUC-Ame-010956	Astyanax mexicanus	71.12	0.00e+00	792.00
IUUC-Bgr-012296	Blumeria graminis	37.12	2.00e-170	593.00
IUUC-Bta-012716	Bos taurus	87.27	0.00e+00	1616.00
IUUC-Bci-013699	Botrytis cinerea	36.64	3.00e-158	552.00
IUUC-Bdi-014525	Brachypodium distachyon	37.88	5.00e-161	561.00
IUUC-Bol-015117	Brassica oleracea	39.63	1.00e-173	603.00
IUUC-Bra-016869	Brassica rapa	39.68	2.00e-175	609.00
IUUC-Cel-018570	Caenorhabditis elegans	33.01	3.00e-127	449.00
IUUC-Cja-019425	Callithrix jacchus	86.88	0.00e+00	1574.00
IUUC-Cfa-020787	Canis familiaris	87.67	0.00e+00	1606.00
IUUC-Cpo-021729	Cavia porcellus	87.63	0.00e+00	1127.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.27	8.00e-107	381.00
IUUC-Csa-024098	Chlorocebus sabaeus	87.06	0.00e+00	1576.00
IUUC-Cho-024495	Choloepus hoffmanni	72.96	0.00e+00	886.00
IUUC-Cin-025245	Ciona intestinalis	48.63	2.00e-168	585.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.81	2.00e-161	563.00
IUUC-Cne-026835	Cryptococcus neoformans	44.69	2.00e-124	440.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.10	1.00e-38	155.00
IUUC-Dre-027874	Danio rerio	71.56	0.00e+00	1291.00
IUUC-Dno-028905	Dasypus novemcinctus	86.32	0.00e+00	1587.00
IUUC-Dor-030383	Dipodomys ordii	83.40	0.00e+00	788.00
IUUC-Dse-031297	Dothistroma septosporum	36.20	4.00e-164	572.00
IUUC-Dme-031956	Drosophila melanogaster	42.33	0.00e+00	667.00
IUUC-Ete-032608	Echinops telfairi	77.91	0.00e+00	885.00
IUUC-Eca-034181	Equus caballus	86.09	0.00e+00	1557.00
IUUC-Eeu-034495	Erinaceus europaeus	87.00	0.00e+00	1518.00
IUUC-Fca-035994	Felis catus	87.53	0.00e+00	1492.00
IUUC-Fal-036611	Ficedula albicollis	77.55	0.00e+00	1335.00
IUUC-Fox-037807	Fusarium oxysporum	36.83	1.00e-163	570.00
IUUC-Fso-038090	Fusarium solani	36.66	1.00e-162	566.00
IUUC-Gmo-039018	Gadus morhua	63.20	0.00e+00	699.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.10	8.00e-166	577.00
IUUC-Gga-040707	Gallus gallus	79.14	0.00e+00	1357.00
IUUC-Gac-042334	Gasterosteus aculeatus	64.46	0.00e+00	687.00
IUUC-Gma-043860	Glycine max	37.51	9.00e-170	590.00
IUUC-Ggo-045334	Gorilla gorilla	86.98	0.00e+00	1544.00
IUUC-Hsa-046996	Homo sapiens	87.17	0.00e+00	1549.00
IUUC-Hvu-047381	Hordeum vulgare	33.33	8.00e-87	314.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	86.64	0.00e+00	1560.00
IUUC-Kpa-049185	Komagataella pastoris	33.94	2.00e-150	526.00
IUUC-Lch-050098	Latimeria chalumnae	65.95	0.00e+00	1118.00
IUUC-Lpe-050710	Leersia perrieri	36.42	5.00e-163	568.00
IUUC-Loc-052745	Lepisosteus oculatus	67.65	0.00e+00	1184.00
IUUC-Lma-053104	Leptosphaeria maculans	37.40	4.00e-172	599.00
IUUC-Laf-054395	Loxodonta africana	86.53	0.00e+00	1562.00
IUUC-Mcc-055077	Macaca mulatta	87.17	0.00e+00	1570.00
IUUC-Meu-056418	Macropus eugenii	87.85	0.00e+00	781.00
IUUC-Mor-057031	Magnaporthe oryzae	37.31	2.00e-151	529.00
IUUC-Mpo-057420	Magnaporthe poae	36.69	2.00e-163	569.00
IUUC-Mtr-057838	Medicago truncatula	38.04	0.00e+00	627.00
IUUC-Mla-058854	Melampsora laricipopulina	36.32	2.00e-154	539.00
IUUC-Mga-060120	Meleagris gallopavo	74.18	0.00e+00	1248.00
IUUC-Mvi-060407	Microbotryum violaceum	44.09	2.00e-135	477.00
IUUC-Mmr-060635	Microcebus murinus	86.03	0.00e+00	1541.00
IUUC-Mmu-064103	Mus musculus	84.31	0.00e+00	1540.00
IUUC-Mac-065569	Musa acuminata	38.02	5.00e-172	598.00
IUUC-Mpu-066462	Mustela putorius furo	87.46	0.00e+00	1597.00
IUUC-Mlu-067894	Myotis lucifugus	87.27	0.00e+00	1604.00
IUUC-Nfi-068321	Neosartorya fischeri	37.40	6.00e-173	601.00
IUUC-Ncr-068661	Neurospora crassa	37.51	1.00e-165	577.00
IUUC-Nle-069409	Nomascus leucogenys	87.06	0.00e+00	1555.00
IUUC-Opr-070445	Ochotona princeps	78.20	0.00e+00	1453.00
IUUC-Ont-072339	Oreochromis niloticus	69.70	0.00e+00	1242.00
IUUC-Oan-073688	Ornithorhynchus anatinus	76.92	0.00e+00	1364.00
IUUC-Ocu-074227	Oryctolagus cuniculus	87.17	0.00e+00	1599.00
IUUC-Oba-075635	Oryza barthii	36.32	1.00e-155	543.00
IUUC-Obr-076897	Oryza brachyantha	36.97	1.00e-165	577.00
IUUC-Ogl-077555	Oryza glaberrima	36.21	2.00e-155	543.00
IUUC-Ogu-078724	Oryza glumaepatula	36.32	7.00e-157	548.00
IUUC-Oin-080030	Oryza indica	36.42	2.00e-156	546.00
IUUC-Olo-080687	Oryza longistaminata	34.48	3.00e-144	505.00
IUUC-Ome-081867	Oryza meridionalis	36.53	5.00e-157	548.00
IUUC-Oni-082559	Oryza nivara	36.42	2.00e-156	546.00
IUUC-Opu-083332	Oryza punctata	38.95	9.00e-147	514.00
IUUC-Oru-084455	Oryza rufipogon	36.42	1.00e-156	546.00
IUUC-Osa-085793	Oryza sativa	36.42	1.00e-156	546.00
IUUC-Ola-087395	Oryzias latipes	67.06	0.00e+00	1136.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.79	2.00e-157	549.00
IUUC-Oga-088574	Otolemur garnettii	87.80	0.00e+00	1601.00
IUUC-Oar-089453	Ovis aries	86.14	0.00e+00	1601.00
IUUC-Ptr-090694	Pan troglodytes	86.96	0.00e+00	1541.00
IUUC-Pan-092420	Papio anubis	86.77	0.00e+00	1561.00
IUUC-Psi-093683	Pelodiscus sinensis	82.40	0.00e+00	1490.00
IUUC-Pma-094197	Petromyzon marinus	57.02	3.00e-73	267.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.73	2.00e-171	596.00
IUUC-Ppa-095208	Physcomitrella patens	39.00	3.00e-171	595.00
IUUC-Pfo-096299	Poecilia formosa	68.32	0.00e+00	1248.00
IUUC-Pab-098706	Pongo abelii	87.17	0.00e+00	1552.00
IUUC-Pop-099275	Populus trichocarpa	38.51	1.00e-171	597.00
IUUC-Pca-100796	Procavia capensis	72.20	0.00e+00	1171.00
IUUC-Ppe-101861	Prunus persica	40.27	6.00e-179	621.00
IUUC-Pva-103241	Pteropus vampyrus	81.26	0.00e+00	1420.00
IUUC-Pgr-103432	Puccinia graminis	43.99	3.00e-120	426.00
IUUC-Ptt-103742	Puccinia triticina	42.15	1.00e-106	380.00
IUUC-Pte-104069	Pyrenophora teres	37.38	9.00e-164	570.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.49	1.00e-171	597.00
IUUC-Rno-105219	Rattus norvegicus	83.56	0.00e+00	1496.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.29	1.00e-156	546.00
IUUC-Sha-107550	Sarcophilus harrisii	94.40	0.00e+00	1711.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.02	1.00e-162	566.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.36	4.00e-166	578.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	37.08	3.00e-164	572.00
IUUC-Smo-108974	Selaginella moellendorffii	39.64	9.00e-169	587.00
IUUC-Sit-110000	Setaria italica	38.54	4.00e-159	555.00
IUUC-Sly-111595	Solanum lycopersicum	39.09	1.00e-178	620.00
IUUC-Stu-112516	Solanum tuberosum	38.49	8.00e-177	614.00
IUUC-Sar-113195	Sorex araneus	77.06	0.00e+00	1248.00
IUUC-Sbi-114465	Sorghum bicolor	36.80	2.00e-166	579.00
IUUC-Sre-115006	Sporisorium reilianum	34.55	2.00e-149	523.00
IUUC-Ssc-115929	Sus scrofa	86.64	0.00e+00	1554.00
IUUC-Tgu-117282	Taeniopygia guttata	77.98	0.00e+00	1336.00
IUUC-Tru-118406	Takifugu rubripes	67.21	0.00e+00	1181.00
IUUC-Tsy-119170	Tarsius syrichta	86.14	0.00e+00	1571.00
IUUC-Tni-119721	Tetraodon nigroviridis	65.77	0.00e+00	1158.00
IUUC-Tca-121761	Theobroma cacao	39.41	7.00e-179	621.00
IUUC-Tre-121908	Trichoderma reesei	36.30	7.00e-162	564.00
IUUC-Tvi-122547	Trichoderma virens	37.19	1.00e-164	573.00
IUUC-Tae-125496	Triticum aestivum	37.67	8.00e-163	567.00
IUUC-Tur-126811	Triticum urartu	39.22	5.00e-163	568.00
IUUC-Tme-126987	Tuber melanosporum	38.99	1.00e-177	617.00
IUUC-Tbe-127315	Tupaia belangeri	89.40	0.00e+00	838.00
IUUC-Ttr-129165	Tursiops truncatus	78.45	0.00e+00	1360.00
IUUC-Uma-129651	Ustilago maydis	34.34	3.00e-148	519.00
IUUC-Vda-129973	Verticillium dahliae	38.00	4.00e-158	552.00
IUUC-Vpa-130163	Vicugna pacos	76.94	0.00e+00	687.00
IUUC-Vvi-131402	Vitis vinifera	37.99	1.00e-176	613.00
IUUC-Xtr-132296	Xenopus tropicalis	73.60	0.00e+00	1301.00
IUUC-Xma-133028	Xiphophorus maculatus	68.04	0.00e+00	1251.00
IUUC-Yli-134484	Yarrowia lipolytica	37.71	7.00e-151	528.00
IUUC-Zma-135938	Zea mays	34.38	4.00e-148	518.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence