iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016450

Ensembl Protein ID

Bo3g058780.1

UniProt Accession

A0A0D3B9R4; A0A0D3B9R4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g058780	Bo3g058780.1	Bo3g058780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-32	111.1	219	256
UBD/Beta-Prp	1.00e-46	161.0	52	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH++sv++la +d  t+lvsG+  ++++vWD+rtg ++
   Q: 219  GHKESVYALAMNDagTMLVSGGTEKVLRVWDPRTGSKT 256
           8**********7778*******************9875 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtlkghedsvlslsfsp.sgdk 108
             +s d+s+l+tgsrdgt+k w +++      +++++h + v++  +  ++ +lv++s+D t+k w +ls+g c++t+++h+d+v++l++ + ++++
   Q: 52   SSVSGDQSYLFTGSRDGTLKRWAFDEDASfcSATFESHVDWVNDAALAGES-TLVSCSSDTTVKTWdSLSDGACTRTFRQHTDYVTCLAVAAkNSNV 147
           456899****************99987656699*****************8.9*************999***********************677** PP
   S: 109  lvsGshdrtirvwdletgqclee.............................................tlsghdgvvncvvvhpdgnllvsGslDrt 160
           ++sG+    + +wd+e      +                                             + +gh+++v  +++++ g +lvsG++ ++
   Q: 148  VASGGLGGEVFIWDIEAALSPVAkpndameegstnglgnsqpvtslrnvgssnnisvqsspshgyaptIAKGHKESVYALAMNDAGTMLVSGGTEKV 244
           ****************9876666699*********************************************************************** PP
   S: 161  vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           +r+Wd +tg+   +l+g htd v+ l +ds+g++++sgs d+ ++lwdl +++c++t+  htd v+ ++ +p  ++++sg+ D+s+++ dl +++ +
   Q: 245  LRVWDPRTGSKTMKLRG-HTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACTPSFTHVYSGGRDQSLYLTDLATRESV 340
           ****************9.******************************************************************************* PP
   S: 258  ktlqlhn.........ssvisvavlsfgdnvlvlgse 285
            + ++++         +s++              ++ 
   Q: 341  LMCTKEHpiqqlalqdDSIW-------------VATI 364
           *****996666666644444.............3333 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MHRVASSGSN GGSVRNRKEK KLTYVLNDGN DLNDGNDSKH CAGVNCLDVL KSSVSGDQSY 60
LFTGSRDGTL KRWAFDEDAS FCSATFESHV DWVNDAALAG ESTLVSCSSD TTVKTWDSLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACCGGG TTGCAAGTTC AGGGAGTAAT GGCGGTTCTG TCCGCAATCG CAAAGAGAAG 60
AAGCTTACCT ATGTCTTAAA CGATGGCAAC GACTTAAACG ATGGCAACGA CTCAAAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001533	Ailuropoda melanoleuca	33.47	3.00e-97	349.00
IUUC-Apl-003709	Anas platyrhynchos	42.95	3.00e-65	241.00
IUUC-Aca-004875	Anolis carolinensis	33.29	1.00e-99	357.00
IUUC-Aly-005464	Arabidopsis lyrata	88.34	0.00e+00	1300.00
IUUC-Acl-008203	Aspergillus clavatus	31.57	7.00e-58	219.00
IUUC-Afl-008571	Aspergillus flavus	29.38	3.00e-55	210.00
IUUC-Afu-009072	Aspergillus fumigatus	30.20	1.00e-52	201.00
IUUC-Ani-009413	Aspergillus nidulans	30.22	8.00e-55	209.00
IUUC-Ang-009571	Aspergillus niger	31.19	1.00e-56	215.00
IUUC-Aor-010064	Aspergillus oryzae	29.38	1.00e-55	211.00
IUUC-Ate-010463	Aspergillus terreus	30.41	9.00e-57	215.00
IUUC-Bra-017237	Brassica rapa	92.37	0.00e+00	1331.00
IUUC-Cel-018656	Caenorhabditis elegans	30.47	4.00e-80	292.00
IUUC-Cpo-021721	Cavia porcellus	34.83	6.00e-96	345.00
IUUC-Cre-022779	Chlamydomonas reinhardtii	35.52	2.00e-46	181.00
IUUC-Cne-026819	Cryptococcus neoformans	29.84	4.00e-30	127.00
IUUC-Cme-027188	Cyanidioschyzon merolae	32.43	2.00e-70	260.00
IUUC-Dre-027926	Danio rerio	32.90	2.00e-98	352.00
IUUC-Dor-030933	Dipodomys ordii	39.08	4.00e-70	258.00
IUUC-Dme-032168	Drosophila melanogaster	29.29	5.00e-72	265.00
IUUC-Eeu-034894	Erinaceus europaeus	38.73	4.00e-79	289.00
IUUC-Fca-035619	Felis catus	38.32	3.00e-85	308.00
IUUC-Fal-036869	Ficedula albicollis	34.46	6.00e-100	358.00
IUUC-Fox-037907	Fusarium oxysporum	27.75	2.00e-50	194.00
IUUC-Gmo-038627	Gadus morhua	33.07	2.00e-98	353.00
IUUC-Gga-040555	Gallus gallus	34.61	9.00e-101	360.00
IUUC-Gac-042497	Gasterosteus aculeatus	32.71	8.00e-99	354.00
IUUC-Kpa-049237	Komagataella pastoris	29.96	3.00e-25	110.00
IUUC-Lch-049507	Latimeria chalumnae	33.24	2.00e-96	346.00
IUUC-Laf-053706	Loxodonta africana	34.69	2.00e-97	350.00
IUUC-Mga-059297	Meleagris gallopavo	34.61	9.00e-101	360.00
IUUC-Mmr-061196	Microcebus murinus	36.12	4.00e-80	291.00
IUUC-Mdo-062762	Monodelphis domestica	34.28	6.00e-99	354.00
IUUC-Mmu-063915	Mus musculus	34.70	1.00e-98	353.00
IUUC-Mpu-065999	Mustela putorius furo	38.46	1.00e-81	296.00
IUUC-Nfi-068416	Neosartorya fischeri	30.70	3.00e-56	213.00
IUUC-Ont-072052	Oreochromis niloticus	32.54	3.00e-94	338.00
IUUC-Oan-073636	Ornithorhynchus anatinus	34.69	2.00e-97	349.00
IUUC-Ola-087546	Oryzias latipes	34.17	3.00e-99	355.00
IUUC-Psi-093911	Pelodiscus sinensis	34.48	6.00e-99	354.00
IUUC-Pfo-096994	Poecilia formosa	32.98	5.00e-97	348.00
IUUC-Pca-100458	Procavia capensis	39.17	6.00e-34	139.00
IUUC-Pva-102698	Pteropus vampyrus	32.67	5.00e-97	348.00
IUUC-Pgr-103649	Puccinia graminis	31.95	2.00e-33	137.00
IUUC-Ptt-103910	Puccinia triticina	32.28	1.00e-38	155.00
IUUC-Rno-104978	Rattus norvegicus	35.61	7.00e-98	351.00
IUUC-Sha-107079	Sarcophilus harrisii	32.97	5.00e-92	331.00
IUUC-Sja-107716	Schizosaccharomyces japonicus	29.65	2.00e-59	224.00
IUUC-Spo-108325	Schizosaccharomyces pombe	28.88	1.00e-48	188.00
IUUC-Sar-113408	Sorex araneus	38.12	2.00e-73	270.00
IUUC-Sre-114998	Sporisorium reilianum	34.95	5.00e-41	163.00
IUUC-Tgu-116517	Taeniopygia guttata	33.64	1.00e-100	360.00
IUUC-Tru-118174	Takifugu rubripes	33.29	1.00e-98	353.00
IUUC-Tsy-118935	Tarsius syrichta	34.21	4.00e-98	352.00
IUUC-Tre-122198	Trichoderma reesei	27.64	1.00e-50	195.00
IUUC-Tvi-122389	Trichoderma virens	30.65	2.00e-40	160.00
IUUC-Tme-126932	Tuber melanosporum	26.98	1.00e-49	192.00
IUUC-Tbe-127267	Tupaia belangeri	41.00	7.00e-44	172.00
IUUC-Ttr-129153	Tursiops truncatus	34.21	2.00e-99	356.00
IUUC-Uma-129604	Ustilago maydis	34.04	1.00e-38	155.00
IUUC-Vda-129925	Verticillium dahliae	31.07	5.00e-41	162.00
IUUC-Vpa-130553	Vicugna pacos	37.20	2.00e-82	299.00
IUUC-Xtr-132346	Xenopus tropicalis	33.86	2.00e-98	353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence