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Tag Content
iUUCD ID IUUC-Aly-005649
Ensembl Protein ID fgenesh2_kg.4__2150__AT2G40360.1
UniProt Accession D7LF32; D7LF32_ARALL
Genbank Protein ID EFH57976.1
Protein Name Ribosome biogenesis protein BOP1 homolog
Genbank Nucleotide ID GL348716
Gene Name ARALYDRAFT_483090
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.4__2150__AT2G40360.1 fgenesh2_kg.4__2150__AT2G40360.1 fgenesh2_kg.4__2150__AT2G40360.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.90e-10 39.7 425 463
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ vt ++  s+   ++sGs Dg++++W++ tg++lk
   Q: 425  GHTGAVTTISTdSSgEWIASGSTDGSVRMWEVETGRCLK 463
           8*********9955699********************97 PP
   
Organism Arabidopsis lyrata
Functional Description
(View)

Functional Description


     Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
 Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
Protein Sequence
(Fasta)
MTKKKKGANE DKIIETKSKT VSGKSQKQKK PVEIEESLKE EDLLQESGTD SDYDGDSLPE 60
SLDSDDFDSD FFDSEYDGTQ EGTEDGDVEF SEDDVLGNLL EHEGSIDNVD DEESEQVESD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005649|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTCTTCTCA GACCAAAACT CGCCTCTGAA AGCTCCGATG ACGAAGAAGA AAAAAGGAGC 60
TAACGAAGAT AAGATTATTG AAACCAAGAG CAAAACCGTT TCTGGGAAAT CTCAGAAACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005649|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08145--BOP1NT
PF00400--WD40
SMART

SM01035--BOP1NT
SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0007276--P:gamete generation
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051302--P:regulation of cell division
KEGG aly:ARALYDRAFT_483090
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001158 Aegilops tauschii 60.34 0.00e+00 699.00
IUUC-Aml-001507 Ailuropoda melanoleuca 43.02 3.00e-139 488.00
IUUC-Atr-003141 Amborella trichopoda 61.19 4.00e-154 537.00
IUUC-Apl-003545 Anas platyrhynchos 42.18 7.00e-125 440.00
IUUC-Ath-007625 Arabidopsis thaliana 91.55 0.00e+00 1326.00
IUUC-Ago-007958 Ashbya gossypii 41.36 8.00e-139 487.00
IUUC-Acl-008344 Aspergillus clavatus 41.48 1.00e-123 436.00
IUUC-Afl-008616 Aspergillus flavus 39.04 2.00e-126 445.00
IUUC-Afu-009083 Aspergillus fumigatus 40.98 3.00e-119 421.00
IUUC-Ani-009365 Aspergillus nidulans 40.46 9.00e-127 447.00
IUUC-Ang-009796 Aspergillus niger 39.25 4.00e-120 424.00
IUUC-Aor-010015 Aspergillus oryzae 39.04 2.00e-126 445.00
IUUC-Ate-010537 Aspergillus terreus 39.77 1.00e-128 453.00
IUUC-Ame-011767 Astyanax mexicanus 54.13 9.00e-66 242.00
IUUC-Bgr-012286 Blumeria graminis 41.42 3.00e-136 478.00
IUUC-Bta-013569 Bos taurus 44.97 8.00e-149 520.00
IUUC-Bci-013820 Botrytis cinerea 41.82 4.00e-125 441.00
IUUC-Bdi-014895 Brachypodium distachyon 64.60 0.00e+00 820.00
IUUC-Bol-016099 Brassica oleracea 86.09 0.00e+00 1111.00
IUUC-Bra-017174 Brassica rapa 86.16 0.00e+00 1122.00
IUUC-Cel-018201 Caenorhabditis elegans 39.61 7.00e-121 427.00
IUUC-Cja-019009 Callithrix jacchus 40.98 2.00e-130 459.00
IUUC-Cfa-020173 Canis familiaris 40.82 3.00e-138 484.00
IUUC-Cpo-021796 Cavia porcellus 44.81 1.00e-150 526.00
IUUC-Cre-022650 Chlamydomonas reinhardtii 49.21 2.00e-170 591.00
IUUC-Csa-023440 Chlorocebus sabaeus 43.99 8.00e-153 533.00
IUUC-Cin-025782 Ciona intestinalis 43.32 1.00e-145 509.00
IUUC-Csv-026352 Ciona savignyi 43.44 8.00e-144 503.00
IUUC-Cgl-026393 Colletotrichum gloeosporioides 37.89 3.00e-107 382.00
IUUC-Cne-027004 Cryptococcus neoformans 42.94 8.00e-149 520.00
IUUC-Cme-027242 Cyanidioschyzon merolae 35.39 3.00e-105 375.00
IUUC-Dre-028658 Danio rerio 46.54 7.00e-163 566.00
IUUC-Dno-028883 Dasypus novemcinctus 44.72 3.00e-152 531.00
IUUC-Dor-031031 Dipodomys ordii 42.40 1.00e-152 533.00
IUUC-Dse-031443 Dothistroma septosporum 38.34 9.00e-122 430.00
IUUC-Dme-031786 Drosophila melanogaster 43.12 2.00e-151 529.00
IUUC-Eca-033677 Equus caballus 45.13 2.00e-151 528.00
IUUC-Eeu-035310 Erinaceus europaeus 41.27 5.00e-111 394.00
IUUC-Fca-035888 Felis catus 43.76 6.00e-148 516.00
IUUC-Fal-037438 Ficedula albicollis 43.60 8.00e-123 433.00
IUUC-Fox-037973 Fusarium oxysporum 41.60 3.00e-139 488.00
IUUC-Fso-038187 Fusarium solani 40.55 2.00e-137 482.00
IUUC-Gmo-039114 Gadus morhua 43.44 9.00e-139 486.00
IUUC-Ggr-039746 Gaeumannomyces graminis 40.72 9.00e-136 476.00
IUUC-Gga-040631 Gallus gallus 47.20 4.00e-85 307.00
IUUC-Gac-042582 Gasterosteus aculeatus 45.02 1.00e-148 519.00
IUUC-Gma-044307 Glycine max 70.05 0.00e+00 920.00
IUUC-Ggo-045587 Gorilla gorilla 43.83 2.00e-152 531.00
IUUC-Hsa-046319 Homo sapiens 43.83 3.00e-152 531.00
IUUC-Hvu-047526 Hordeum vulgare 64.07 0.00e+00 805.00
IUUC-Itr-048683 Ictidomys tridecemlineatus 44.79 4.00e-151 527.00
IUUC-Kpa-049221 Komagataella pastoris 40.36 1.00e-127 450.00
IUUC-Lch-049640 Latimeria chalumnae 46.66 1.00e-162 566.00
IUUC-Lpe-051135 Leersia perrieri 61.50 0.00e+00 744.00
IUUC-Loc-051930 Lepisosteus oculatus 47.73 3.00e-165 574.00
IUUC-Lma-053290 Leptosphaeria maculans 41.43 2.00e-128 452.00
IUUC-Laf-053903 Loxodonta africana 42.36 3.00e-133 468.00
IUUC-Mcc-055471 Macaca mulatta 43.71 5.00e-152 530.00
IUUC-Meu-056190 Macropus eugenii 45.13 1.00e-151 529.00
IUUC-Mor-057135 Magnaporthe oryzae 39.61 1.00e-129 456.00
IUUC-Mpo-057475 Magnaporthe poae 38.71 4.00e-127 447.00
IUUC-Mtr-058689 Medicago truncatula 64.87 0.00e+00 841.00
IUUC-Mla-059149 Melampsora laricipopulina 43.19 4.00e-143 501.00
IUUC-Mga-059645 Meleagris gallopavo 42.51 2.00e-49 187.00
IUUC-Mvi-060485 Microbotryum violaceum 40.72 6.00e-123 435.00
IUUC-Mmr-061674 Microcebus murinus 44.46 2.00e-149 522.00
IUUC-Mdo-062973 Monodelphis domestica 42.99 2.00e-157 548.00
IUUC-Mmu-064180 Mus musculus 42.21 6.00e-153 533.00
IUUC-Mac-064535 Musa acuminata 50.13 0.00e+00 712.00
IUUC-Mpu-066406 Mustela putorius furo 44.68 7.00e-156 543.00
IUUC-Mlu-067795 Myotis lucifugus 44.97 6.00e-145 507.00
IUUC-Nfi-068516 Neosartorya fischeri 39.54 1.00e-113 403.00
IUUC-Ncr-068767 Neurospora crassa 41.18 5.00e-122 431.00
IUUC-Opr-071084 Ochotona princeps 46.12 6.00e-59 220.00
IUUC-Ont-071614 Oreochromis niloticus 46.37 2.00e-159 555.00
IUUC-Oba-075980 Oryza barthii 61.83 0.00e+00 752.00
IUUC-Obr-076799 Oryza brachyantha 65.03 0.00e+00 817.00
IUUC-Ogl-077134 Oryza glaberrima 64.71 0.00e+00 800.00
IUUC-Ogu-078655 Oryza glumaepatula 62.58 0.00e+00 778.00
IUUC-Oin-079654 Oryza indica 64.71 0.00e+00 799.00
IUUC-Olo-080706 Oryza longistaminata 61.83 0.00e+00 753.00
IUUC-Oni-082508 Oryza nivara 61.34 0.00e+00 751.00
IUUC-Opu-083707 Oryza punctata 61.99 0.00e+00 754.00
IUUC-Oru-084453 Oryza rufipogon 61.83 0.00e+00 753.00
IUUC-Osa-085811 Oryza sativa 64.54 0.00e+00 799.00
IUUC-Ola-087361 Oryzias latipes 46.17 2.00e-164 572.00
IUUC-Oga-088015 Otolemur garnettii 44.63 2.00e-155 541.00
IUUC-Oar-090058 Ovis aries 37.64 1.00e-66 246.00
IUUC-Ptr-090631 Pan troglodytes 42.30 2.00e-62 232.00
IUUC-Pan-092306 Papio anubis 43.96 3.00e-151 528.00
IUUC-Pma-094622 Petromyzon marinus 45.47 4.00e-156 543.00
IUUC-Pno-094794 Phaeosphaeria nodorum 38.83 3.00e-118 419.00
IUUC-Ppa-095528 Physcomitrella patens 56.66 7.00e-150 523.00
IUUC-Pfo-096682 Poecilia formosa 46.29 3.00e-158 551.00
IUUC-Pab-097939 Pongo abelii 43.06 4.00e-134 470.00
IUUC-Pop-099043 Populus trichocarpa 73.00 0.00e+00 863.00
IUUC-Pca-100333 Procavia capensis 45.29 4.00e-155 541.00
IUUC-Ppe-102078 Prunus persica 69.86 0.00e+00 865.00
IUUC-Pgr-103525 Puccinia graminis 42.34 8.00e-131 460.00
IUUC-Ptt-103929 Puccinia triticina 43.13 2.00e-128 453.00
IUUC-Pte-104029 Pyrenophora teres 41.32 9.00e-138 483.00
IUUC-Pyt-104446 Pyrenophora triticirepentis 41.63 2.00e-137 482.00
IUUC-Rno-105248 Rattus norvegicus 45.11 8.00e-153 533.00
IUUC-Sce-106381 Saccharomyces cerevisiae 39.36 2.00e-131 462.00
IUUC-Sha-106519 Sarcophilus harrisii 46.27 1.00e-158 552.00
IUUC-Sja-107908 Schizosaccharomyces japonicus 41.16 8.00e-133 467.00
IUUC-Spo-108071 Schizosaccharomyces pombe 42.03 7.00e-132 463.00
IUUC-Smo-109604 Selaginella moellendorffii 59.24 0.00e+00 721.00
IUUC-Sit-110551 Setaria italica 65.20 0.00e+00 808.00
IUUC-Sly-110970 Solanum lycopersicum 76.54 1.00e-155 541.00
IUUC-Stu-112593 Solanum tuberosum 71.62 0.00e+00 928.00
IUUC-Sar-113123 Sorex araneus 40.69 2.00e-60 224.00
IUUC-Sbi-113945 Sorghum bicolor 64.88 0.00e+00 823.00
IUUC-Sre-115188 Sporisorium reilianum 37.78 5.00e-125 441.00
IUUC-Ssc-115352 Sus scrofa 43.51 3.00e-151 528.00
IUUC-Tru-117685 Takifugu rubripes 47.92 3.00e-163 568.00
IUUC-Tni-119982 Tetraodon nigroviridis 47.66 1.00e-156 546.00
IUUC-Tca-121664 Theobroma cacao 74.14 0.00e+00 991.00
IUUC-Tre-122229 Trichoderma reesei 41.21 3.00e-124 438.00
IUUC-Tvi-122576 Trichoderma virens 41.88 2.00e-127 449.00
IUUC-Tae-124110 Triticum aestivum 64.66 0.00e+00 771.00
IUUC-Tur-126781 Triticum urartu 60.34 0.00e+00 682.00
IUUC-Tme-127080 Tuber melanosporum 45.44 7.00e-156 543.00
IUUC-Ttr-128514 Tursiops truncatus 43.09 2.00e-98 352.00
IUUC-Uma-129556 Ustilago maydis 38.03 2.00e-122 432.00
IUUC-Vda-129715 Verticillium dahliae 40.95 6.00e-131 461.00
IUUC-Vvi-131211 Vitis vinifera 71.48 0.00e+00 921.00
IUUC-Xma-133883 Xiphophorus maculatus 45.76 2.00e-154 538.00
IUUC-Yli-134438 Yarrowia lipolytica 41.26 3.00e-129 455.00
IUUC-Zma-135341 Zea mays 57.76 0.00e+00 775.00
Created Date 25-Jun-2017

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