iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003022

Ensembl Protein ID

ERN19030

UniProt Accession

U5DA17; U5DA17_AMBTC

Genbank Protein ID

ERN19030.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392075

Gene Name

AMTR_s00061p00064900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00061p00064900	ERN19030	ERN19030

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-07	29.6	315	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++G+ D+t++vWD+r
   Q: 315  GHLDYSFASAWhPDgRIFATGNQDKTCRVWDIR 347
           799999999***99999**************86 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSQYRGDECE YPADDHEMAD ADEDDIDDEF CGRGSGESES DDEYDMLTRV TDTSSEQARK 60
GKDIQGIPWE RLNITREKYR QTRLEQYKNY ENIPQSGKGI EKACKETEKG YKYYDFWHNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCAAT ACCGAGGGGA TGAGTGTGAG TACCCTGCTG ATGACCATGA AATGGCTGAT 60
GCTGATGAGG ATGATATAGA TGATGAATTT TGTGGCAGAG GTTCCGGTGA ATCAGAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

atr:18447402

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	75.00	0.00e+00	651.00
IUUC-Aly-006558	Arabidopsis lyrata	73.44	2.00e-179	620.00
IUUC-Ath-006618	Arabidopsis thaliana	73.56	1.00e-178	618.00
IUUC-Bdi-014834	Brachypodium distachyon	74.40	0.00e+00	656.00
IUUC-Bol-015525	Brassica oleracea	73.45	0.00e+00	642.00
IUUC-Bra-016810	Brassica rapa	72.68	0.00e+00	645.00
IUUC-Dse-031456	Dothistroma septosporum	31.85	9.00e-46	176.00
IUUC-Gma-043519	Glycine max	76.84	0.00e+00	719.00
IUUC-Hvu-047631	Hordeum vulgare	67.08	4.00e-170	589.00
IUUC-Lpe-050907	Leersia perrieri	69.08	1.00e-172	597.00
IUUC-Mtr-058694	Medicago truncatula	74.72	0.00e+00	691.00
IUUC-Mac-065126	Musa acuminata	76.89	0.00e+00	672.00
IUUC-Oba-075716	Oryza barthii	73.19	0.00e+00	644.00
IUUC-Obr-076195	Oryza brachyantha	65.84	8.00e-169	585.00
IUUC-Ogl-077272	Oryza glaberrima	72.49	0.00e+00	639.00
IUUC-Ogu-078041	Oryza glumaepatula	72.95	0.00e+00	640.00
IUUC-Oin-079991	Oryza indica	66.50	1.00e-170	591.00
IUUC-Olo-080659	Oryza longistaminata	60.10	1.00e-143	501.00
IUUC-Ome-081872	Oryza meridionalis	64.82	8.00e-162	561.00
IUUC-Oni-082371	Oryza nivara	72.95	0.00e+00	641.00
IUUC-Opu-083680	Oryza punctata	67.52	5.00e-171	592.00
IUUC-Oru-085156	Oryza rufipogon	73.19	0.00e+00	642.00
IUUC-Osa-086197	Oryza sativa	73.19	0.00e+00	642.00
IUUC-Pop-099666	Populus trichocarpa	74.55	0.00e+00	699.00
IUUC-Spo-108140	Schizosaccharomyces pombe	29.18	3.00e-36	145.00
IUUC-Sit-110341	Setaria italica	72.70	3.00e-173	599.00
IUUC-Sly-111343	Solanum lycopersicum	76.39	0.00e+00	683.00
IUUC-Stu-112207	Solanum tuberosum	77.92	0.00e+00	674.00
IUUC-Sbi-113791	Sorghum bicolor	72.30	0.00e+00	632.00
IUUC-Tca-121187	Theobroma cacao	76.50	0.00e+00	683.00
IUUC-Tae-122709	Triticum aestivum	70.76	1.00e-177	614.00
IUUC-Tur-126622	Triticum urartu	67.61	0.00e+00	630.00
IUUC-Vvi-131183	Vitis vinifera	74.77	0.00e+00	690.00
IUUC-Zma-135672	Zea mays	73.25	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence