iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098967

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

NtN2 family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_820184; POPTR_0008s01330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s01330	POPTR_0008s01330.1	POPTR_0008s01330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.30e-71	240.4	197	520

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++v+++el+k++++    +++++q+D
   Q: 197  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDIPSGSIPLALQSLFYKL-QYSDTSVATKELTKSFGWDT--YDSFMQHD 279
           6******************************.....555666899***************.888889***********877..67****** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           +qE+ ++l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v+g +  
   Q: 280  VQELNRVLCEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCR-- 342
           ****************..........................7899*******************************************.. PP
   S: 183  kkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspe 269
              ++  +++++++ e+leg+nky+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++ pe
   Q: 343  ---DVYASFDKYVEVERLEGDNKYHAEQH-GLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDrengKYLS-PE 428
           ...9**********************996.79***********************************************965544554.56 PP
   S: 270  ekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYk 336
            + ++++ Y L++v+vHsG++++GHY+ay++   +++W++fdD++Vt+ + ++ lee+                        s+aY+l+Y 
   Q: 429  ADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPtLSDQWFKFDDERVTKEDIKRALEEQYggeeelpqtnpgfnnspfkftkySNAYMLVYI 519
           66778**************************945677*************9999997779******************************8 PP
   S: 337  r 337
           r
   Q: 520  R 520
           7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTLMTPPPLN QQEDDEMLVP QTEFADGPQP MEVAQAETAT AVDAQSVDDP PSARFTWTID 60
NFSRLNAKKL YSDVFVVGGY KWRILIFPKG NNVDHLSMYL DVADSATLPY GWSRYAQFSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAACCCCT CTTCCTCTCT CTCTCTCTCT CCTTCTCCCC CCCTCCTTTT TCTACACCAA 60
TCCCCCCCCC CCTCTCTCTC TGAACTACTC ACTTTACACT CCTCTCTGAT TCCTCCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s01330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009257	Aspergillus nidulans	31.25	4.00e-33	137.00
IUUC-Cre-022708	Chlamydomonas reinhardtii	55.58	5.00e-144	503.00
IUUC-Cin-025689	Ciona intestinalis	35.03	2.00e-153	536.00
IUUC-Dse-031433	Dothistroma septosporum	35.54	6.00e-162	564.00
IUUC-Ogu-078038	Oryza glumaepatula	78.95	0.00e+00	1800.00
IUUC-Oin-079574	Oryza indica	79.63	0.00e+00	1806.00
IUUC-Olo-080477	Oryza longistaminata	75.26	0.00e+00	1732.00
IUUC-Ome-081879	Oryza meridionalis	82.68	0.00e+00	1840.00
IUUC-Oni-082461	Oryza nivara	81.00	0.00e+00	1821.00
IUUC-Ppa-095922	Physcomitrella patens	78.57	0.00e+00	1796.00
IUUC-Pca-100543	Procavia capensis	37.50	3.00e-92	332.00
IUUC-Sce-106230	Saccharomyces cerevisiae	34.05	1.00e-125	444.00
IUUC-Smo-109308	Selaginella moellendorffii	78.72	0.00e+00	1775.00
IUUC-Tsy-119277	Tarsius syrichta	45.51	1.00e-73	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence