iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098987

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carrier protein 4

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_572278; POPTR_0014s08240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s08240	POPTR_0014s08240.1	POPTR_0014s08240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.70e-32	112.5	11	140

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 8    elekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspals 97
           +l+k  ++ +++++ ++  ++e+ v + Gp+++pY+ggv+++++e+p+ YP+++P++ f++ki+hPnv+e  G+vCl++++  ++Wsp+ +
   Q: 11   DLMKLMMSDYKVELIND-GMQEFYVHFNGPNESPYHGGVWRIKVELPDAYPYRSPSIGFVNKIYHPNVDEMsGSVCLDVIN--QTWSPMFD 98
           5667778889999***9.8***************************************************99********9..******** PP
   S: 98   vesvl.lsiqsllaepnpesplneeaaellkknreeykkkvr 138
           + +v+ + i +ll  pnp++pln eaa l+ +++ +y+ +v+
   Q: 99   LVNVFeVFIPQLLLYPNPSDPLNGEAAALMMRDKPAYELRVK 140
           *****899******************************9997 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPSKRREM DLMKLMMSDY KVELINDGMQ EFYVHFNGPN ESPYHGGVWR IKVELPDAYP 60
YRSPSIGFVN KIYHPNVDEM SGSVCLDVIN QTWSPMFDLV NVFEVFIPQL LLYPNPSDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGCTTTTT TAAAAGCTAT CATTCACTCT TTTGCCATAG GGCTCGGTGT GTATTGTCCA 60
CAGTTGAATG AAAATAAATA TCCAATGATC TATTTATTTA TTTTCCTCCT CCCGATATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0014s08240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dse-031243	Dothistroma septosporum	64.32	8.00e-69	252.00
IUUC-Sce-106165	Saccharomyces cerevisiae	66.15	4.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence