iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006029

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_908639

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_600696.1	scaffold_600696.1	scaffold_600696.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-08	34.2	94	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+d+  ++++++ p C+H+fh+dC+  w       +++++CPlCr
   Q: 94   CSICLCDYeaREPVRCIPeCNHCFHTDCVDEW------LRTSATCPLCR 136
           ********87777999999*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSPISPPASG VGLGYGIAIA VSILVLISFI MLASYICIRS KSTGRDEATS DGVLDSPSPA 60
AEVKLGLDRP VIESYPRIVL GDSRRLPRPN NGPCSICLCD YEAREPVRCI PECNHCFHTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCTCTC TCACTCTCTC CACATATATG TCTCCTATAA GTCCTCCGGC CAGTGGGGTT 60
GGGCTTGGCT ACGGTATAGC CATCGCCGTA AGCATCCTAG TTCTCATCTC CTTTATAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_908639

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003007	Amborella trichopoda	45.12	8.00e-32	129.00
IUUC-Ath-006726	Arabidopsis thaliana	98.11	7.00e-87	311.00
IUUC-Bol-016361	Brassica oleracea	88.05	3.00e-77	279.00
IUUC-Bra-017863	Brassica rapa	89.31	9.00e-71	258.00
IUUC-Dse-031302	Dothistroma septosporum	52.27	7.00e-11	62.00
IUUC-Gma-043023	Glycine max	51.18	1.00e-37	148.00
IUUC-Mtr-057943	Medicago truncatula	57.06	1.00e-52	197.00
IUUC-Mac-064609	Musa acuminata	47.95	2.00e-33	134.00
IUUC-Oba-075997	Oryza barthii	43.33	1.00e-23	103.00
IUUC-Ogl-077468	Oryza glaberrima	45.75	2.00e-24	107.00
IUUC-Ogu-078269	Oryza glumaepatula	43.33	2.00e-23	103.00
IUUC-Oin-079787	Oryza indica	42.67	5.00e-23	99.80
IUUC-Olo-080986	Oryza longistaminata	44.72	3.00e-18	83.60
IUUC-Ome-081466	Oryza meridionalis	45.75	2.00e-24	107.00
IUUC-Oni-082932	Oryza nivara	45.75	9.00e-25	107.00
IUUC-Opu-083492	Oryza punctata	45.70	3.00e-28	117.00
IUUC-Oru-084454	Oryza rufipogon	42.67	5.00e-23	99.80
IUUC-Osa-086034	Oryza sativa	43.65	1.00e-15	77.00
IUUC-Pop-100049	Populus trichocarpa	52.21	3.00e-37	146.00
IUUC-Ppe-101147	Prunus persica	53.29	5.00e-39	152.00
IUUC-Pgr-103360	Puccinia graminis	45.61	5.00e-12	62.00
IUUC-Smo-109669	Selaginella moellendorffii	49.68	2.00e-36	144.00
IUUC-Sly-111274	Solanum lycopersicum	51.68	5.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence