iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131511

UUCD1 version

UUC-ViV-00660

Ensembl Protein ID

VIT_16s0039g01690.t01

UniProt Accession

F6HEE2; F6HEE2_VITVI

Genbank Protein ID

CCB50588.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595750

Gene Name

VIT_16s0039g01690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0039g01690	VIT_16s0039g01690.t01	VIT_16s0039g01690.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-52	172.0	142	181
UBD/Beta-Prp	8.30e-105	350.8	454	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tl..lvsGsdDgtikvWDlrtgvll 36
           gH++ vt++ f +d ++  lvsGsdD t++vWDl + +++
   Q: 142  GHKGVVTSIIFhPDvNRllLVSGSDDATVRVWDLMSKKCV 181
           8***********77755347**************999887 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletg 126
           gh+++v av fs++   ++v+gs+Drt+kvw+l+          + k   ++ +h++++ sl++ p+++ + sGs+drt+ vw l+  
   Q: 454  GHTGAVGAVAFSKKLRnFFVSGSSDRTLKVWSLDglsddteqpiSLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDL 541
           7999*******998666**************8888889766666677777777*********************************** PP
   S: 127  qcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec 214
             +  +l+gh++ v++v+++p +++++++s D+t+++W ++ g++l+t++g ht+sv   sf   g+++vs++ dg vklw ++t+ec
   Q: 542  VSVV-VLKGHKRGVWSVEFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEG-HTSSVLRASFLTRGTQVVSCGADGLVKLWTIKTNEC 627
           ****.*********************************************9.************************************ PP
   S: 215  vrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           + t+  h+d v+ +++ +++e l++g+sD ++++W d++ +d   ++ +++
   Q: 628  IATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWhDSTASDKEEAFRKEE 678
           *****************************************9999999887 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASPTLKKNY RSTPALQQFY TGGPFAVASD GSFIVCACDD AIKIVDSSNA SIRSVVEGDS 60
QTVTALALSP DDRLLFSSSH SRQIRVWELS SLKCIRSWKG HEGPVMGMAC DASGGVLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCATGGC GTCTCCGACG TTGAAGAAGA ACTACAGGTC CACACCGGCG CTGCAGCAGT 60
TCTACACAGG CGGCCCCTTC GCCGTCGCTT CCGACGGCTC CTTCATTGTC TGCGCCTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	61.56	0.00e+00	994.00
IUUC-Aml-002376	Ailuropoda melanoleuca	37.42	1.00e-153	536.00
IUUC-Atr-002486	Amborella trichopoda	67.17	0.00e+00	1185.00
IUUC-Apl-003519	Anas platyrhynchos	33.33	3.00e-111	395.00
IUUC-Aca-004363	Anolis carolinensis	34.66	3.00e-75	275.00
IUUC-Aly-006152	Arabidopsis lyrata	72.52	0.00e+00	1199.00
IUUC-Ath-006966	Arabidopsis thaliana	72.86	0.00e+00	1207.00
IUUC-Ago-007746	Ashbya gossypii	30.75	8.00e-106	377.00
IUUC-Acl-008009	Aspergillus clavatus	28.74	1.00e-103	370.00
IUUC-Afl-008681	Aspergillus flavus	28.76	5.00e-99	355.00
IUUC-Afu-008798	Aspergillus fumigatus	28.40	9.00e-95	340.00
IUUC-Ani-009278	Aspergillus nidulans	28.56	6.00e-110	391.00
IUUC-Ang-009640	Aspergillus niger	30.64	6.00e-112	397.00
IUUC-Aor-010160	Aspergillus oryzae	28.76	2.00e-99	355.00
IUUC-Ate-010320	Aspergillus terreus	29.48	2.00e-109	389.00
IUUC-Ame-010930	Astyanax mexicanus	39.90	2.00e-42	164.00
IUUC-Bgr-012054	Blumeria graminis	31.26	1.00e-107	383.00
IUUC-Bta-012611	Bos taurus	39.25	1.00e-153	536.00
IUUC-Bci-013797	Botrytis cinerea	29.11	4.00e-105	375.00
IUUC-Bdi-014384	Brachypodium distachyon	66.59	0.00e+00	1117.00
IUUC-Bol-016483	Brassica oleracea	71.21	0.00e+00	1206.00
IUUC-Bra-017798	Brassica rapa	71.09	0.00e+00	1187.00
IUUC-Cel-018664	Caenorhabditis elegans	27.19	2.00e-90	325.00
IUUC-Cja-019092	Callithrix jacchus	38.79	7.00e-160	556.00
IUUC-Cfa-021040	Canis familiaris	38.08	2.00e-158	552.00
IUUC-Cpo-022529	Cavia porcellus	37.70	9.00e-150	523.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	65.69	7.00e-55	204.00
IUUC-Csa-024205	Chlorocebus sabaeus	39.15	5.00e-161	560.00
IUUC-Cin-025560	Ciona intestinalis	36.05	8.00e-150	523.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.85	3.00e-109	388.00
IUUC-Cne-027082	Cryptococcus neoformans	30.03	9.00e-115	407.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.49	3.00e-40	159.00
IUUC-Dre-028138	Danio rerio	38.52	9.00e-156	543.00
IUUC-Dno-029914	Dasypus novemcinctus	35.56	4.00e-103	367.00
IUUC-Dor-030685	Dipodomys ordii	38.80	3.00e-98	352.00
IUUC-Dse-031429	Dothistroma septosporum	29.16	4.00e-107	381.00
IUUC-Dme-031995	Drosophila melanogaster	29.04	2.00e-94	339.00
IUUC-Ete-033086	Echinops telfairi	43.06	1.00e-98	353.00
IUUC-Eca-034354	Equus caballus	38.52	2.00e-151	529.00
IUUC-Eeu-034832	Erinaceus europaeus	40.65	4.00e-96	345.00
IUUC-Fca-036136	Felis catus	34.01	2.00e-118	418.00
IUUC-Fal-036859	Ficedula albicollis	38.84	4.00e-163	567.00
IUUC-Fox-037863	Fusarium oxysporum	28.30	1.00e-95	343.00
IUUC-Fso-038389	Fusarium solani	28.11	2.00e-103	369.00
IUUC-Gmo-038711	Gadus morhua	34.13	1.00e-136	479.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.85	5.00e-98	351.00
IUUC-Gga-040263	Gallus gallus	38.14	4.00e-163	567.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.13	5.00e-164	570.00
IUUC-Gma-044026	Glycine max	72.55	0.00e+00	1283.00
IUUC-Ggo-044693	Gorilla gorilla	39.25	1.00e-160	559.00
IUUC-Hsa-046048	Homo sapiens	39.13	3.00e-160	558.00
IUUC-Hvu-047608	Hordeum vulgare	66.15	0.00e+00	1103.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	39.06	2.00e-165	575.00
IUUC-Kpa-049209	Komagataella pastoris	31.40	1.00e-116	413.00
IUUC-Lch-050085	Latimeria chalumnae	36.61	7.00e-145	506.00
IUUC-Lpe-050945	Leersia perrieri	65.09	0.00e+00	1076.00
IUUC-Loc-052679	Lepisosteus oculatus	37.83	6.00e-174	603.00
IUUC-Laf-053685	Loxodonta africana	37.58	5.00e-147	514.00
IUUC-Mcc-055861	Macaca mulatta	38.91	6.00e-158	550.00
IUUC-Meu-056820	Macropus eugenii	34.74	3.00e-111	395.00
IUUC-Mor-057234	Magnaporthe oryzae	28.51	8.00e-96	344.00
IUUC-Mpo-057456	Magnaporthe poae	28.77	2.00e-74	272.00
IUUC-Mtr-058122	Medicago truncatula	73.62	0.00e+00	1286.00
IUUC-Mla-058980	Melampsora laricipopulina	28.66	6.00e-84	304.00
IUUC-Mga-060080	Meleagris gallopavo	36.98	8.00e-161	560.00
IUUC-Mvi-060338	Microbotryum violaceum	35.33	3.00e-155	541.00
IUUC-Mmr-060762	Microcebus murinus	38.81	2.00e-156	545.00
IUUC-Mdo-061975	Monodelphis domestica	37.99	4.00e-154	538.00
IUUC-Mmu-064038	Mus musculus	38.30	1.00e-155	542.00
IUUC-Mac-065189	Musa acuminata	66.29	0.00e+00	1185.00
IUUC-Mpu-066526	Mustela putorius furo	37.89	1.00e-150	526.00
IUUC-Mlu-067716	Myotis lucifugus	37.89	3.00e-165	574.00
IUUC-Nfi-068474	Neosartorya fischeri	28.88	3.00e-100	358.00
IUUC-Ncr-068826	Neurospora crassa	27.31	6.00e-94	338.00
IUUC-Nle-069832	Nomascus leucogenys	38.91	1.00e-161	562.00
IUUC-Opr-071183	Ochotona princeps	37.50	6.00e-150	523.00
IUUC-Ont-072371	Oreochromis niloticus	39.21	1.00e-164	573.00
IUUC-Oan-073491	Ornithorhynchus anatinus	37.35	2.00e-132	465.00
IUUC-Oba-075963	Oryza barthii	65.09	0.00e+00	1100.00
IUUC-Obr-076173	Oryza brachyantha	66.46	0.00e+00	1095.00
IUUC-Ogl-077692	Oryza glaberrima	65.21	0.00e+00	1101.00
IUUC-Ogu-078965	Oryza glumaepatula	65.09	0.00e+00	1100.00
IUUC-Oin-079708	Oryza indica	64.62	0.00e+00	1095.00
IUUC-Olo-080679	Oryza longistaminata	65.09	0.00e+00	1098.00
IUUC-Oni-082960	Oryza nivara	64.50	0.00e+00	1093.00
IUUC-Opu-083282	Oryza punctata	64.99	0.00e+00	1070.00
IUUC-Oru-085224	Oryza rufipogon	64.86	0.00e+00	1097.00
IUUC-Osa-085320	Oryza sativa	64.86	0.00e+00	1097.00
IUUC-Ola-086370	Oryzias latipes	31.67	4.00e-73	268.00
IUUC-Olu-087814	Ostreococcus lucimarinus	33.86	3.00e-127	448.00
IUUC-Oga-088458	Otolemur garnettii	37.78	2.00e-161	561.00
IUUC-Oar-090032	Ovis aries	36.22	2.00e-109	389.00
IUUC-Ptr-090749	Pan troglodytes	39.13	5.00e-160	557.00
IUUC-Pan-091691	Papio anubis	37.58	4.00e-148	518.00
IUUC-Psi-093200	Pelodiscus sinensis	37.59	6.00e-160	556.00
IUUC-Pma-094165	Petromyzon marinus	36.86	1.00e-112	399.00
IUUC-Pno-095048	Phaeosphaeria nodorum	30.89	5.00e-90	325.00
IUUC-Ppa-095336	Physcomitrella patens	54.86	0.00e+00	934.00
IUUC-Pfo-096132	Poecilia formosa	39.37	4.00e-163	567.00
IUUC-Pab-097855	Pongo abelii	39.15	2.00e-162	565.00
IUUC-Pop-099434	Populus trichocarpa	73.53	0.00e+00	1295.00
IUUC-Pca-100232	Procavia capensis	49.18	8.00e-54	204.00
IUUC-Ppe-101665	Prunus persica	73.58	0.00e+00	1285.00
IUUC-Pva-102178	Pteropus vampyrus	39.25	3.00e-158	551.00
IUUC-Pgr-103288	Puccinia graminis	28.67	5.00e-85	308.00
IUUC-Ptt-103808	Puccinia triticina	29.96	9.00e-82	297.00
IUUC-Pte-104205	Pyrenophora teres	31.03	3.00e-108	385.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.96	7.00e-98	350.00
IUUC-Rno-105617	Rattus norvegicus	38.40	4.00e-156	544.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.91	2.00e-109	389.00
IUUC-Sha-107378	Sarcophilus harrisii	38.03	5.00e-152	530.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.10	4.00e-117	414.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.09	5.00e-115	407.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	28.85	2.00e-109	389.00
IUUC-Smo-109257	Selaginella moellendorffii	55.92	0.00e+00	926.00
IUUC-Sit-110258	Setaria italica	64.70	0.00e+00	1123.00
IUUC-Sly-111521	Solanum lycopersicum	71.50	0.00e+00	1219.00
IUUC-Stu-112718	Solanum tuberosum	83.09	2.00e-61	226.00
IUUC-Sar-113586	Sorex araneus	34.78	4.00e-17	82.00
IUUC-Sbi-114768	Sorghum bicolor	65.45	0.00e+00	1123.00
IUUC-Sre-115159	Sporisorium reilianum	31.98	3.00e-93	335.00
IUUC-Ssc-116342	Sus scrofa	28.11	2.00e-70	259.00
IUUC-Tgu-117320	Taeniopygia guttata	37.67	2.00e-150	525.00
IUUC-Tru-118024	Takifugu rubripes	38.68	2.00e-164	572.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.90	2.00e-166	578.00
IUUC-Tca-121248	Theobroma cacao	76.97	0.00e+00	1309.00
IUUC-Tre-122079	Trichoderma reesei	27.81	1.00e-101	363.00
IUUC-Tvi-122554	Trichoderma virens	28.66	3.00e-104	372.00
IUUC-Tae-123690	Triticum aestivum	66.95	0.00e+00	1119.00
IUUC-Tur-126436	Triticum urartu	62.78	0.00e+00	899.00
IUUC-Tme-126942	Tuber melanosporum	33.71	9.00e-118	417.00
IUUC-Ttr-128964	Tursiops truncatus	37.55	5.00e-155	540.00
IUUC-Uma-129473	Ustilago maydis	30.13	7.00e-99	354.00
IUUC-Vda-129749	Verticillium dahliae	29.81	1.00e-99	357.00
IUUC-Xtr-132816	Xenopus tropicalis	33.92	6.00e-133	467.00
IUUC-Xma-133672	Xiphophorus maculatus	39.28	2.00e-168	585.00
IUUC-Yli-134602	Yarrowia lipolytica	34.01	2.00e-136	478.00
IUUC-Zma-135559	Zea mays	63.50	0.00e+00	1095.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence