iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssl-108626

Ensembl Protein ID

EDO00235

UniProt Accession

A7ECQ6; A7ECQ6_SCLS1

Genbank Protein ID

APA09187.1; EDO00235.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CP017817; CH476623

Gene Name

SS1G_03095; sscle_04g039570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SS1G_03095	EDO00235	EDO00235

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-49	163.1	112	144
UBD/Beta-Prp	2.40e-93	311.6	572	727

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH++ +t laf  s+ +l+sGs+D  + vWDl 
   Q: 112  GHKSAITTLAFdkSGVRLASGSRDTDVIVWDLV 144
           8**********976699**************86 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.....sgdk 108
           i ++ fspd +lla++  d+t+kv+ v++ kl+  l+gh+ +v ++++s d+k++vt+s D++i++w l+ g+c  ++ gh+ds+l ++f p     +g++
   Q: 572  ILSLRFSPDARLLAVALLDNTVKVFFVDSLKLFLNLYGHKLPVLSMDISFDSKLIVTCSADKNIRLWGLDFGDCHKAFFGHQDSILQVAFIPhsqdgNGHH 672
           44599***************************************************************************************9999999** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           + s s+d++i+ wd ++ + ++  l+gh+g ++ ++v+ +g  +vs+s D+ +r+W
   Q: 673  FFSSSKDKMIKYWDGDKFEQIQ-RLDGHHGEIWALAVSRTGEFFVSASHDKSIRVW 727
           **********************.********************************* PP

Organism

Sclerotinia sclerotiorum

Protein Sequence
(Fasta)

MVKSYLKYEH SKSFGLVNSS TSNVVWSTDG AGVSSRNTGS GRAIVAANEE VLCWEIKTGE 60
LLSRWRDNDC KSQVSAIAQS KMDIDIFAVG YEDGSIRLWD SKIATVIVSF NGHKSAITTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCAAGT CTTACTTGTA AGTCTTCAAA ATGACGTGAA ATTCATATCA ATCACTAATT 60
TGCTCAACTC TAGAAAATAC GAGCATTCGA AATCATTCGG TCTTGTCAAT TCAAGTACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ssl:SS1G_03095

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	34.94	1.00e-131	461.00
IUUC-Aml-001245	Ailuropoda melanoleuca	38.00	9.00e-166	575.00
IUUC-Atr-002700	Amborella trichopoda	35.12	5.00e-153	533.00
IUUC-Apl-004164	Anas platyrhynchos	38.13	5.00e-129	452.00
IUUC-Aca-004765	Anolis carolinensis	35.84	1.00e-161	561.00
IUUC-Aly-006503	Arabidopsis lyrata	34.79	3.00e-155	540.00
IUUC-Ath-006848	Arabidopsis thaliana	35.99	1.00e-157	548.00
IUUC-Ago-007909	Ashbya gossypii	43.84	0.00e+00	743.00
IUUC-Acl-008238	Aspergillus clavatus	67.80	0.00e+00	1328.00
IUUC-Afl-008544	Aspergillus flavus	68.04	0.00e+00	1301.00
IUUC-Afu-008868	Aspergillus fumigatus	67.39	0.00e+00	1326.00
IUUC-Ani-009367	Aspergillus nidulans	66.80	0.00e+00	1254.00
IUUC-Ang-009732	Aspergillus niger	67.49	0.00e+00	1320.00
IUUC-Aor-010140	Aspergillus oryzae	68.42	0.00e+00	1310.00
IUUC-Ate-010572	Aspergillus terreus	65.94	0.00e+00	1267.00
IUUC-Ame-010956	Astyanax mexicanus	43.66	7.00e-133	466.00
IUUC-Bgr-012296	Blumeria graminis	68.65	0.00e+00	1306.00
IUUC-Bta-012716	Bos taurus	38.02	4.00e-171	593.00
IUUC-Bci-013699	Botrytis cinerea	93.58	0.00e+00	1659.00
IUUC-Bdi-014525	Brachypodium distachyon	34.44	4.00e-147	513.00
IUUC-Bol-015117	Brassica oleracea	36.55	2.00e-154	537.00
IUUC-Bra-016869	Brassica rapa	36.80	1.00e-155	541.00
IUUC-Cel-018570	Caenorhabditis elegans	29.14	1.00e-102	365.00
IUUC-Cja-019425	Callithrix jacchus	38.00	7.00e-174	602.00
IUUC-Cfa-020787	Canis familiaris	38.58	8.00e-169	585.00
IUUC-Cpo-021729	Cavia porcellus	39.85	5.00e-135	472.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	41.62	3.00e-99	354.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.93	3.00e-174	603.00
IUUC-Cho-024495	Choloepus hoffmanni	40.04	4.00e-97	347.00
IUUC-Cin-025245	Ciona intestinalis	35.52	1.00e-101	361.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	71.43	0.00e+00	1331.00
IUUC-Cne-026835	Cryptococcus neoformans	42.07	0.00e+00	659.00
IUUC-Cme-027162	Cyanidioschyzon merolae	34.07	4.00e-36	144.00
IUUC-Dre-027874	Danio rerio	37.23	1.00e-178	617.00
IUUC-Dno-028905	Dasypus novemcinctus	38.16	2.00e-172	597.00
IUUC-Dor-030383	Dipodomys ordii	31.41	2.00e-63	235.00
IUUC-Dse-031297	Dothistroma septosporum	57.49	0.00e+00	1085.00
IUUC-Dme-031956	Drosophila melanogaster	31.56	7.00e-127	446.00
IUUC-Ete-032608	Echinops telfairi	35.27	3.00e-94	337.00
IUUC-Eca-034181	Equus caballus	37.93	2.00e-168	583.00
IUUC-Eeu-034495	Erinaceus europaeus	38.94	2.00e-167	580.00
IUUC-Fca-035994	Felis catus	39.13	4.00e-165	573.00
IUUC-Fal-036611	Ficedula albicollis	41.90	6.00e-129	452.00
IUUC-Fox-037807	Fusarium oxysporum	70.97	0.00e+00	1352.00
IUUC-Fso-038090	Fusarium solani	70.94	0.00e+00	1345.00
IUUC-Gmo-039018	Gadus morhua	33.33	1.00e-86	312.00
IUUC-Ggr-039748	Gaeumannomyces graminis	69.55	0.00e+00	1351.00
IUUC-Gga-040707	Gallus gallus	41.72	1.00e-127	449.00
IUUC-Gac-042334	Gasterosteus aculeatus	31.15	1.00e-73	269.00
IUUC-Gma-043033	Glycine max	36.09	2.00e-153	534.00
IUUC-Ggo-045334	Gorilla gorilla	38.08	3.00e-171	593.00
IUUC-Hsa-046996	Homo sapiens	38.18	4.00e-171	593.00
IUUC-Hvu-047381	Hordeum vulgare	33.61	1.00e-78	285.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	37.62	2.00e-167	580.00
IUUC-Kpa-049185	Komagataella pastoris	40.64	0.00e+00	707.00
IUUC-Lch-050098	Latimeria chalumnae	34.78	3.00e-153	533.00
IUUC-Lpe-050710	Leersia perrieri	34.90	1.00e-145	508.00
IUUC-Loc-052745	Lepisosteus oculatus	35.49	8.00e-167	578.00
IUUC-Lma-053104	Leptosphaeria maculans	63.24	0.00e+00	1206.00
IUUC-Laf-054395	Loxodonta africana	38.18	2.00e-170	590.00
IUUC-Mcc-055077	Macaca mulatta	38.14	1.00e-171	594.00
IUUC-Meu-056418	Macropus eugenii	42.73	2.00e-91	328.00
IUUC-Mor-057031	Magnaporthe oryzae	69.27	0.00e+00	1217.00
IUUC-Mpo-057420	Magnaporthe poae	70.16	0.00e+00	1328.00
IUUC-Mtr-057838	Medicago truncatula	36.58	7.00e-157	545.00
IUUC-Mla-058854	Melampsora laricipopulina	41.33	0.00e+00	664.00
IUUC-Mga-060120	Meleagris gallopavo	39.08	1.00e-127	448.00
IUUC-Mvi-060407	Microbotryum violaceum	45.82	0.00e+00	790.00
IUUC-Mmr-060635	Microcebus murinus	37.54	6.00e-169	585.00
IUUC-Mdo-063023	Monodelphis domestica	36.98	3.00e-166	577.00
IUUC-Mmu-064103	Mus musculus	38.24	1.00e-174	605.00
IUUC-Mac-065569	Musa acuminata	36.37	5.00e-154	536.00
IUUC-Mpu-066462	Mustela putorius furo	37.81	2.00e-168	584.00
IUUC-Mlu-067894	Myotis lucifugus	38.04	1.00e-169	587.00
IUUC-Nfi-068321	Neosartorya fischeri	67.32	0.00e+00	1304.00
IUUC-Ncr-068661	Neurospora crassa	71.50	0.00e+00	1330.00
IUUC-Nle-069409	Nomascus leucogenys	37.54	9.00e-173	598.00
IUUC-Opr-070445	Ochotona princeps	43.36	1.00e-124	438.00
IUUC-Ont-072339	Oreochromis niloticus	37.67	4.00e-176	609.00
IUUC-Oan-073688	Ornithorhynchus anatinus	37.47	7.00e-161	558.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.89	1.00e-168	585.00
IUUC-Oba-075635	Oryza barthii	34.44	5.00e-137	479.00
IUUC-Obr-076897	Oryza brachyantha	36.11	6.00e-150	522.00
IUUC-Ogl-077555	Oryza glaberrima	34.34	1.00e-136	478.00
IUUC-Ogu-078724	Oryza glumaepatula	34.75	1.00e-138	484.00
IUUC-Oin-080030	Oryza indica	34.85	1.00e-136	478.00
IUUC-Olo-080687	Oryza longistaminata	33.00	2.00e-127	447.00
IUUC-Ome-081867	Oryza meridionalis	34.41	7.00e-137	479.00
IUUC-Oni-082559	Oryza nivara	34.51	9.00e-137	478.00
IUUC-Opu-083332	Oryza punctata	38.99	5.00e-132	462.00
IUUC-Oru-084455	Oryza rufipogon	34.75	3.00e-136	477.00
IUUC-Osa-085793	Oryza sativa	34.75	3.00e-136	477.00
IUUC-Ola-087395	Oryzias latipes	36.17	4.00e-160	556.00
IUUC-Olu-087768	Ostreococcus lucimarinus	42.33	1.00e-115	408.00
IUUC-Oga-088574	Otolemur garnettii	38.04	5.00e-170	589.00
IUUC-Oar-089453	Ovis aries	37.88	7.00e-171	592.00
IUUC-Ptr-090694	Pan troglodytes	38.18	5.00e-171	592.00
IUUC-Pan-092420	Papio anubis	37.83	7.00e-171	592.00
IUUC-Psi-093683	Pelodiscus sinensis	36.32	5.00e-161	559.00
IUUC-Pma-094197	Petromyzon marinus	32.94	8.00e-31	124.00
IUUC-Pno-094783	Phaeosphaeria nodorum	60.47	0.00e+00	1165.00
IUUC-Ppa-095208	Physcomitrella patens	35.66	2.00e-149	520.00
IUUC-Pfo-096299	Poecilia formosa	37.14	1.00e-178	618.00
IUUC-Pab-098706	Pongo abelii	37.76	3.00e-172	597.00
IUUC-Pop-099275	Populus trichocarpa	35.18	6.00e-152	529.00
IUUC-Pca-100796	Procavia capensis	31.69	6.00e-101	359.00
IUUC-Ppe-101861	Prunus persica	36.22	1.00e-147	515.00
IUUC-Pva-103241	Pteropus vampyrus	36.15	1.00e-152	531.00
IUUC-Pgr-103432	Puccinia graminis	40.56	0.00e+00	667.00
IUUC-Ptt-103742	Puccinia triticina	38.20	3.00e-173	600.00
IUUC-Pte-104069	Pyrenophora teres	63.59	0.00e+00	1147.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	63.55	0.00e+00	1178.00
IUUC-Rno-105219	Rattus norvegicus	37.66	3.00e-169	587.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.94	0.00e+00	741.00
IUUC-Sha-107550	Sarcophilus harrisii	36.22	7.00e-165	572.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	44.10	0.00e+00	768.00
IUUC-Spo-108239	Schizosaccharomyces pombe	44.66	0.00e+00	794.00
IUUC-Smo-109477	Selaginella moellendorffii	35.96	3.00e-150	523.00
IUUC-Sit-110000	Setaria italica	34.25	5.00e-136	476.00
IUUC-Sly-111595	Solanum lycopersicum	35.16	9.00e-152	528.00
IUUC-Stu-112516	Solanum tuberosum	34.95	1.00e-148	518.00
IUUC-Sar-113195	Sorex araneus	43.66	4.00e-115	407.00
IUUC-Sbi-114465	Sorghum bicolor	34.73	2.00e-145	507.00
IUUC-Sre-115006	Sporisorium reilianum	39.63	0.00e+00	683.00
IUUC-Ssc-115929	Sus scrofa	37.41	3.00e-166	577.00
IUUC-Tgu-117282	Taeniopygia guttata	36.20	2.00e-161	561.00
IUUC-Tru-118406	Takifugu rubripes	36.34	4.00e-171	593.00
IUUC-Tsy-119170	Tarsius syrichta	37.84	4.00e-167	579.00
IUUC-Tni-119721	Tetraodon nigroviridis	35.94	4.00e-167	579.00
IUUC-Tca-121761	Theobroma cacao	36.03	6.00e-158	549.00
IUUC-Tre-121908	Trichoderma reesei	70.32	0.00e+00	1297.00
IUUC-Tvi-122547	Trichoderma virens	70.77	0.00e+00	1306.00
IUUC-Tae-125496	Triticum aestivum	36.16	2.00e-141	494.00
IUUC-Tur-126811	Triticum urartu	37.05	2.00e-142	497.00
IUUC-Tme-126987	Tuber melanosporum	61.40	0.00e+00	1192.00
IUUC-Tbe-127315	Tupaia belangeri	45.84	2.00e-108	384.00
IUUC-Ttr-129165	Tursiops truncatus	44.21	1.00e-64	239.00
IUUC-Uma-129651	Ustilago maydis	40.33	0.00e+00	700.00
IUUC-Vda-129973	Verticillium dahliae	70.56	0.00e+00	1306.00
IUUC-Vpa-130163	Vicugna pacos	32.11	7.00e-58	216.00
IUUC-Vvi-131402	Vitis vinifera	36.40	5.00e-156	543.00
IUUC-Xtr-132296	Xenopus tropicalis	36.60	1.00e-161	561.00
IUUC-Xma-133028	Xiphophorus maculatus	36.76	5.00e-179	619.00
IUUC-Yli-134484	Yarrowia lipolytica	46.45	0.00e+00	792.00
IUUC-Zma-135938	Zea mays	36.15	4.00e-140	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence