iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048587

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01073379

Gene Name

SEC13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000014017.2	ENSSTOT00000014021.2	ENSSTOP00000012562.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-29	98.7	54	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ +W 
   Q: 54   GHEGPVWQVAWahPMygNILASCSYDRKVIIWK 86
           8***********9666699*************8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

VSVINTVDTS HEDMIHDAQM DYYGTRLATC SSDRSVKIFD VRNGGQILIA DLRGHEGPVW 60
QVAWAHPMYG NILASCSYDR KVIIWKEENG TWEKTHEHSG HDSSVNSVCW APHDYGLILA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATCAGTAA TCAACACCGT AGATACATCC CATGAGGATA TGATTGTGAG TATTTAATCC 60
TCCCTCTGGG GCTTTGGGCA TGGGCATTTC TGTGGGAGGG ACAAAGCATG GATTTTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0005654--C:nucleoplasm
GO:0032008--P:positive regulation of TOR signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	54.49	1.00e-91	328.00
IUUC-Aml-001832	Ailuropoda melanoleuca	97.20	0.00e+00	644.00
IUUC-Atr-002914	Amborella trichopoda	55.18	8.00e-91	326.00
IUUC-Apl-003992	Anas platyrhynchos	94.44	2.00e-170	590.00
IUUC-Aca-005283	Anolis carolinensis	93.77	9.00e-179	619.00
IUUC-Aly-005654	Arabidopsis lyrata	55.00	4.00e-90	323.00
IUUC-Ath-006816	Arabidopsis thaliana	55.67	2.00e-90	325.00
IUUC-Ago-007827	Ashbya gossypii	50.00	8.00e-83	300.00
IUUC-Acl-008205	Aspergillus clavatus	51.16	7.00e-80	290.00
IUUC-Afl-008748	Aspergillus flavus	50.81	2.00e-82	298.00
IUUC-Afu-008791	Aspergillus fumigatus	51.16	6.00e-80	290.00
IUUC-Ani-009152	Aspergillus nidulans	49.84	1.00e-82	298.00
IUUC-Ang-009765	Aspergillus niger	50.81	9.00e-83	299.00
IUUC-Aor-009927	Aspergillus oryzae	50.67	2.00e-79	288.00
IUUC-Ate-010248	Aspergillus terreus	50.49	2.00e-82	298.00
IUUC-Ame-011478	Astyanax mexicanus	86.92	3.00e-167	580.00
IUUC-Bgr-012276	Blumeria graminis	50.00	2.00e-79	288.00
IUUC-Bta-012700	Bos taurus	97.20	0.00e+00	641.00
IUUC-Bci-013722	Botrytis cinerea	49.17	1.00e-81	295.00
IUUC-Bdi-014818	Brachypodium distachyon	54.82	6.00e-92	330.00
IUUC-Bol-015779	Brassica oleracea	56.46	4.00e-90	323.00
IUUC-Bra-016973	Brassica rapa	56.46	5.00e-90	325.00
IUUC-Cel-018479	Caenorhabditis elegans	41.14	8.00e-69	253.00
IUUC-Cja-019956	Callithrix jacchus	97.56	5.00e-167	579.00
IUUC-Cfa-020752	Canis familiaris	98.44	0.00e+00	648.00
IUUC-Cpo-021871	Cavia porcellus	96.57	0.00e+00	639.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	54.79	4.00e-96	343.00
IUUC-Csa-023393	Chlorocebus sabaeus	97.82	0.00e+00	647.00
IUUC-Cho-024786	Choloepus hoffmanni	76.32	4.00e-134	470.00
IUUC-Cin-025332	Ciona intestinalis	70.68	3.00e-132	464.00
IUUC-Csv-025926	Ciona savignyi	69.38	6.00e-129	452.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.19	2.00e-78	285.00
IUUC-Cne-027054	Cryptococcus neoformans	50.00	2.00e-78	285.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.66	6.00e-50	192.00
IUUC-Dre-027782	Danio rerio	87.54	2.00e-168	584.00
IUUC-Dno-029628	Dasypus novemcinctus	97.20	0.00e+00	642.00
IUUC-Dor-030650	Dipodomys ordii	80.69	2.00e-145	508.00
IUUC-Dse-031206	Dothistroma septosporum	46.53	7.00e-77	280.00
IUUC-Dme-031854	Drosophila melanogaster	59.27	1.00e-102	365.00
IUUC-Ete-032618	Echinops telfairi	67.91	2.00e-118	417.00
IUUC-Eca-033268	Equus caballus	98.13	0.00e+00	647.00
IUUC-Fca-035918	Felis catus	97.82	0.00e+00	644.00
IUUC-Fal-037551	Ficedula albicollis	93.18	2.00e-159	554.00
IUUC-Fox-037763	Fusarium oxysporum	49.17	2.00e-81	295.00
IUUC-Fso-038341	Fusarium solani	48.52	6.00e-80	290.00
IUUC-Gmo-038638	Gadus morhua	86.92	1.00e-168	585.00
IUUC-Ggr-039865	Gaeumannomyces graminis	48.99	2.00e-78	285.00
IUUC-Gga-040193	Gallus gallus	94.08	8.00e-178	615.00
IUUC-Gma-044311	Glycine max	54.85	6.00e-91	327.00
IUUC-Ggo-045252	Gorilla gorilla	97.51	0.00e+00	645.00
IUUC-Hsa-046565	Homo sapiens	97.20	0.00e+00	642.00
IUUC-Hvu-047835	Hordeum vulgare	55.81	3.00e-93	334.00
IUUC-Kpa-049148	Komagataella pastoris	52.98	8.00e-87	313.00
IUUC-Lch-050421	Latimeria chalumnae	89.41	2.00e-172	597.00
IUUC-Lpe-051187	Leersia perrieri	53.16	5.00e-92	333.00
IUUC-Loc-052167	Lepisosteus oculatus	88.20	1.00e-169	588.00
IUUC-Lma-053250	Leptosphaeria maculans	51.01	4.00e-80	290.00
IUUC-Laf-054304	Loxodonta africana	97.20	0.00e+00	641.00
IUUC-Mcc-055519	Macaca mulatta	97.51	0.00e+00	645.00
IUUC-Meu-056439	Macropus eugenii	94.70	0.00e+00	630.00
IUUC-Mor-057241	Magnaporthe oryzae	48.97	4.00e-78	284.00
IUUC-Mpo-057373	Magnaporthe poae	43.73	3.00e-63	234.00
IUUC-Mtr-058412	Medicago truncatula	54.85	4.00e-89	320.00
IUUC-Mla-058966	Melampsora laricipopulina	49.39	1.00e-86	312.00
IUUC-Mga-060066	Meleagris gallopavo	94.44	2.00e-170	590.00
IUUC-Mvi-060290	Microbotryum violaceum	46.18	3.00e-80	294.00
IUUC-Mmr-060717	Microcebus murinus	98.44	0.00e+00	648.00
IUUC-Mdo-062496	Monodelphis domestica	95.33	0.00e+00	632.00
IUUC-Mmu-063490	Mus musculus	98.44	0.00e+00	651.00
IUUC-Mac-065307	Musa acuminata	55.29	2.00e-88	318.00
IUUC-Mpu-066601	Mustela putorius furo	98.44	0.00e+00	648.00
IUUC-Mlu-067501	Myotis lucifugus	98.13	0.00e+00	647.00
IUUC-Nfi-068360	Neosartorya fischeri	50.00	1.00e-65	242.00
IUUC-Ncr-068928	Neurospora crassa	49.16	2.00e-82	298.00
IUUC-Nle-069028	Nomascus leucogenys	97.20	0.00e+00	644.00
IUUC-Opr-070446	Ochotona princeps	97.71	6.00e-178	615.00
IUUC-Ont-071587	Oreochromis niloticus	86.29	2.00e-169	587.00
IUUC-Oan-073211	Ornithorhynchus anatinus	92.83	3.00e-179	620.00
IUUC-Ocu-074306	Oryctolagus cuniculus	95.95	0.00e+00	635.00
IUUC-Oba-075069	Oryza barthii	54.49	2.00e-91	328.00
IUUC-Obr-076667	Oryza brachyantha	54.82	7.00e-92	330.00
IUUC-Ogl-077208	Oryza glaberrima	54.49	2.00e-91	328.00
IUUC-Ogu-078513	Oryza glumaepatula	54.49	2.00e-91	328.00
IUUC-Oin-079094	Oryza indica	54.49	2.00e-91	328.00
IUUC-Olo-080473	Oryza longistaminata	54.49	2.00e-91	328.00
IUUC-Ome-081643	Oryza meridionalis	54.49	2.00e-91	328.00
IUUC-Oni-082589	Oryza nivara	54.49	2.00e-91	328.00
IUUC-Opu-083677	Oryza punctata	54.49	3.00e-91	327.00
IUUC-Oru-084537	Oryza rufipogon	54.49	2.00e-91	328.00
IUUC-Osa-085449	Oryza sativa	54.49	2.00e-91	328.00
IUUC-Ola-087226	Oryzias latipes	86.29	2.00e-167	580.00
IUUC-Olu-087893	Ostreococcus lucimarinus	51.03	5.00e-79	286.00
IUUC-Oga-088837	Otolemur garnettii	98.44	0.00e+00	649.00
IUUC-Oar-089594	Ovis aries	96.88	0.00e+00	641.00
IUUC-Ptr-091132	Pan troglodytes	97.20	0.00e+00	643.00
IUUC-Psi-093568	Pelodiscus sinensis	94.16	4.00e-172	596.00
IUUC-Pma-094172	Petromyzon marinus	72.61	5.00e-63	232.00
IUUC-Pno-094955	Phaeosphaeria nodorum	49.34	1.00e-78	285.00
IUUC-Ppa-095578	Physcomitrella patens	56.11	2.00e-92	331.00
IUUC-Pfo-096063	Poecilia formosa	87.23	1.00e-168	584.00
IUUC-Pab-098674	Pongo abelii	96.88	0.00e+00	641.00
IUUC-Pop-099402	Populus trichocarpa	55.00	7.00e-91	326.00
IUUC-Pca-100824	Procavia capensis	79.13	3.00e-144	504.00
IUUC-Ppe-101707	Prunus persica	54.85	1.00e-88	320.00
IUUC-Pva-103161	Pteropus vampyrus	95.02	0.00e+00	625.00
IUUC-Pgr-103573	Puccinia graminis	53.25	1.00e-89	323.00
IUUC-Ptt-103700	Puccinia triticina	51.91	5.00e-83	300.00
IUUC-Pte-104267	Pyrenophora teres	49.66	1.00e-77	282.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	48.30	5.00e-70	257.00
IUUC-Rno-104833	Rattus norvegicus	98.75	0.00e+00	651.00
IUUC-Sce-106437	Saccharomyces cerevisiae	51.83	2.00e-77	281.00
IUUC-Sha-106611	Sarcophilus harrisii	94.70	0.00e+00	630.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	49.67	1.00e-82	298.00
IUUC-Spo-108362	Schizosaccharomyces pombe	52.25	1.00e-85	309.00
IUUC-Smo-109674	Selaginella moellendorffii	54.93	6.00e-93	333.00
IUUC-Sit-110132	Setaria italica	54.15	2.00e-91	328.00
IUUC-Sly-111852	Solanum lycopersicum	53.31	1.00e-86	312.00
IUUC-Stu-112195	Solanum tuberosum	53.64	3.00e-87	314.00
IUUC-Sbi-114229	Sorghum bicolor	54.00	7.00e-92	330.00
IUUC-Sre-114898	Sporisorium reilianum	49.00	9.00e-91	326.00
IUUC-Ssc-115995	Sus scrofa	98.00	6.00e-86	308.00
IUUC-Tgu-116793	Taeniopygia guttata	93.46	7.00e-167	579.00
IUUC-Tru-117797	Takifugu rubripes	86.60	3.00e-168	583.00
IUUC-Tsy-118967	Tarsius syrichta	95.24	3.00e-29	122.00
IUUC-Tni-120366	Tetraodon nigroviridis	85.98	5.00e-168	582.00
IUUC-Tca-121068	Theobroma cacao	54.95	8.00e-89	319.00
IUUC-Tre-121899	Trichoderma reesei	49.83	1.00e-81	295.00
IUUC-Tvi-122380	Trichoderma virens	50.00	1.00e-81	296.00
IUUC-Tae-123998	Triticum aestivum	56.15	4.00e-94	337.00
IUUC-Tur-126202	Triticum urartu	55.48	7.00e-93	333.00
IUUC-Tme-127181	Tuber melanosporum	53.25	7.00e-89	320.00
IUUC-Ttr-128448	Tursiops truncatus	85.67	3.00e-158	550.00
IUUC-Uma-129661	Ustilago maydis	49.57	1.00e-91	329.00
IUUC-Vda-129666	Verticillium dahliae	51.54	4.00e-79	287.00
IUUC-Vpa-130318	Vicugna pacos	97.82	0.00e+00	645.00
IUUC-Vvi-130868	Vitis vinifera	54.33	2.00e-89	322.00
IUUC-Xtr-131859	Xenopus tropicalis	89.72	2.00e-171	594.00
IUUC-Xma-133898	Xiphophorus maculatus	87.23	6.00e-169	585.00
IUUC-Yli-134559	Yarrowia lipolytica	53.22	2.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence