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Tag Content
iUUCD ID IUUC-Apl-004210
Ensembl Protein ID ENSAPLP00000012507.1
UniProt Accession U3IZ31; U3IZ31_ANAPL
Genbank Protein ID ENSAPLP00000012507
Protein Name Uncharacterized protein
Genbank Nucleotide ID ADON01095732
Gene Name LDB1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAPLG00000012702.1 ENSAPLT00000013248.1 ENSAPLP00000012507.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/U-box 72.50 6.00e-107 384.00 IUUC-Dme-031667
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Anas platyrhynchos
Protein Sequence
(Fasta)
PVPLLSLQGC SSKSFKLYSP KEPPNGNAFP PFHPGTMLDR DVGPTPMYPP TYLEPGIGLP 60
GPYGNQTDYR IFELNKRLQN WTEECDNLWW DAFTTEFFED DAMLTITFCL EDGPKRYTIG 120
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Protein Fasta Sequence



>IUUC-Apl-004210|E3,U-box|Anas platyrhynchos
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Nucleotide Sequence
(Fasta)
CCCGTGCCTT TGCTCTCCCT GCAAGGCTGT TCCTCTAAGT CGTTCAAGCT GTACTCGCCA 60
AAGGAGCCCC CGAACGGCAA CGCCTTCCCC CCCTTCCACC CGGGCACCAT GCTGGATCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Apl-004210|E3,U-box|Anas platyrhynchos
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0000790--C:nuclear chromatin
GO:0005667--C:transcription factor complex
GO:0003682--F:chromatin binding
GO:0001158--F:enhancer sequence-specific DNA binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0009948--P:anterior/posterior axis specification
GO:0022607--P:cellular component assembly
GO:0021702--P:cerebellar Purkinje cell differentiation
GO:0010669--P:epithelial structure maintenance
GO:0001702--P:gastrulation with mouth forming second
GO:0043973--P:histone H3-K4 acetylation
GO:0045647--P:negative regulation of erythrocyte differentiation
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045785--P:positive regulation of cell adhesion
GO:0046985--P:positive regulation of hemoglobin biosynthetic process
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0032784--P:regulation of DNA-templated transcription, elongation
GO:0051893--P:regulation of focal adhesion assembly
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance
GO:0006366--P:transcription from RNA polymerase II promoter
GO:0000972--P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016055--P:Wnt signaling pathway

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000177 Aegilops tauschii 23.49 1.00e-03 38.90
IUUC-Aml-002031 Ailuropoda melanoleuca 97.55 1.00e-177 615.00
IUUC-Atr-003083 Amborella trichopoda 22.06 1.00e-03 38.90
IUUC-Aca-005241 Anolis carolinensis 98.48 7.00e-179 619.00
IUUC-Aly-006204 Arabidopsis lyrata 25.00 9.00e-06 45.40
IUUC-Ath-007339 Arabidopsis thaliana 25.00 9.00e-06 45.40
IUUC-Ago-007859 Ashbya gossypii 31.71 1.50e+00 26.90
IUUC-Acl-008255 Aspergillus clavatus 21.12 3.00e-06 47.00
IUUC-Ame-010910 Astyanax mexicanus 97.81 1.00e-164 572.00
IUUC-Bgr-012180 Blumeria graminis 21.63 1.00e-05 45.10
IUUC-Bta-012596 Bos taurus 81.98 6.00e-114 403.00
IUUC-Bci-013927 Botrytis cinerea 24.66 2.00e-06 47.40
IUUC-Bol-015721 Brassica oleracea 25.53 2.00e-06 47.80
IUUC-Bra-017183 Brassica rapa 25.53 2.00e-06 47.80
IUUC-Cel-018189 Caenorhabditis elegans 33.76 5.00e-31 129.00
IUUC-Cja-019586 Callithrix jacchus 72.83 7.00e-116 409.00
IUUC-Cfa-021188 Canis familiaris 97.55 3.00e-177 614.00
IUUC-Cpo-022350 Cavia porcellus 96.96 2.00e-176 610.00
IUUC-Csa-023816 Chlorocebus sabaeus 96.96 4.00e-176 610.00
IUUC-Cho-024958 Choloepus hoffmanni 61.96 7.00e-63 233.00
IUUC-Cin-025721 Ciona intestinalis 55.61 2.00e-74 271.00
IUUC-Csv-026065 Ciona savignyi 57.53 7.00e-77 280.00
IUUC-Dre-027356 Danio rerio 80.97 5.00e-114 404.00
IUUC-Dno-029918 Dasypus novemcinctus 97.25 4.00e-175 607.00
IUUC-Dor-030634 Dipodomys ordii 97.01 3.00e-159 553.00
IUUC-Dse-031245 Dothistroma septosporum 24.00 8.00e-05 42.00
IUUC-Dme-031667 Drosophila melanogaster 72.73 2.00e-105 375.00
IUUC-Ete-032246 Echinops telfairi 81.00 5.00e-113 400.00
IUUC-Eca-034015 Equus caballus 72.83 4.00e-116 410.00
IUUC-Eeu-034902 Erinaceus europaeus 97.01 3.00e-159 553.00
IUUC-Fca-035903 Felis catus 97.00 8.00e-180 622.00
IUUC-Fal-037407 Ficedula albicollis 81.33 9.00e-115 406.00
IUUC-Gmo-039466 Gadus morhua 90.66 8.00e-173 599.00
IUUC-Ggr-040030 Gaeumannomyces graminis 25.93 5.00e-03 36.60
IUUC-Gga-040214 Gallus gallus 98.47 1.00e-177 615.00
IUUC-Gac-042214 Gasterosteus aculeatus 95.00 1.00e-171 595.00
IUUC-Gma-042794 Glycine max 24.53 9.00e-07 48.90
IUUC-Ggo-044988 Gorilla gorilla 72.46 2.00e-116 411.00
IUUC-Hsa-046092 Homo sapiens 81.78 1.00e-115 409.00
IUUC-Itr-047934 Ictidomys tridecemlineatus 97.26 1.00e-176 612.00
IUUC-Lch-049895 Latimeria chalumnae 87.40 8.00e-64 236.00
IUUC-Lpe-050806 Leersia perrieri 25.35 7.00e-06 45.80
IUUC-Loc-052845 Lepisosteus oculatus 97.25 2.00e-171 595.00
IUUC-Lma-053090 Leptosphaeria maculans 23.62 2.00e-04 41.20
IUUC-Laf-054538 Loxodonta africana 98.19 7.00e-148 516.00
IUUC-Mcc-055116 Macaca mulatta 72.83 6.00e-116 409.00
IUUC-Meu-056777 Macropus eugenii 96.01 6.00e-156 543.00
IUUC-Mpo-057376 Magnaporthe poae 21.99 5.00e-04 39.70
IUUC-Mtr-058142 Medicago truncatula 24.53 1.00e-06 48.50
IUUC-Mga-059716 Meleagris gallopavo 80.44 7.00e-114 403.00
IUUC-Mmr-060649 Microcebus murinus 72.83 2.00e-116 412.00
IUUC-Mdo-062535 Monodelphis domestica 81.33 5.00e-115 407.00
IUUC-Mmu-064036 Mus musculus 81.33 3.00e-115 407.00
IUUC-Mac-065338 Musa acuminata 23.67 2.00e-05 44.30
IUUC-Mpu-065719 Mustela putorius furo 97.26 1.00e-176 612.00
IUUC-Mlu-067219 Myotis lucifugus 94.91 1.00e-175 608.00
IUUC-Ncr-068691 Neurospora crassa 22.08 1.00e-04 42.00
IUUC-Nle-068983 Nomascus leucogenys 72.83 2.00e-116 411.00
IUUC-Opr-070467 Ochotona princeps 97.01 3.00e-159 553.00
IUUC-Ont-071566 Oreochromis niloticus 91.92 8.00e-173 599.00
IUUC-Oan-073368 Ornithorhynchus anatinus 96.68 2.00e-157 548.00
IUUC-Ocu-074854 Oryctolagus cuniculus 72.46 6.00e-117 413.00
IUUC-Ome-081687 Oryza meridionalis 26.32 2.00e-03 37.40
IUUC-Ola-086364 Oryzias latipes 92.75 5.00e-172 596.00
IUUC-Oga-088235 Otolemur garnettii 81.33 3.00e-115 407.00
IUUC-Oar-089547 Ovis aries 97.55 1.00e-177 615.00
IUUC-Ptr-091423 Pan troglodytes 72.83 8.00e-116 409.00
IUUC-Pan-092378 Papio anubis 96.68 1.00e-158 552.00
IUUC-Psi-093638 Pelodiscus sinensis 81.42 4.00e-115 407.00
IUUC-Pma-094384 Petromyzon marinus 91.11 6.00e-21 93.20
IUUC-Pno-095027 Phaeosphaeria nodorum 22.66 2.00e-04 40.80
IUUC-Pfo-096031 Poecilia formosa 95.86 2.00e-155 541.00
IUUC-Pab-097886 Pongo abelii 72.83 2.00e-116 411.00
IUUC-Pop-099430 Populus trichocarpa 24.85 6.00e-06 46.20
IUUC-Pca-101138 Procavia capensis 97.01 3.00e-159 553.00
IUUC-Ppe-101293 Prunus persica 29.67 2.00e-06 47.40
IUUC-Pva-103215 Pteropus vampyrus 72.83 8.00e-117 413.00
IUUC-Pte-104238 Pyrenophora teres 24.41 5.00e-04 38.90
IUUC-Rno-105968 Rattus norvegicus 81.33 3.00e-115 407.00
IUUC-Sha-107595 Sarcophilus harrisii 96.28 2.00e-169 588.00
IUUC-Ssl-108527 Sclerotinia sclerotiorum 23.45 7.00e-06 45.40
IUUC-Smo-109552 Selaginella moellendorffii 17.62 1.00e-03 38.50
IUUC-Sly-110873 Solanum lycopersicum 25.47 7.00e-06 45.80
IUUC-Stu-112586 Solanum tuberosum 20.35 5.00e-03 36.20
IUUC-Sar-113076 Sorex araneus 73.78 4.00e-100 357.00
IUUC-Sre-115143 Sporisorium reilianum 18.93 1.00e-03 38.50
IUUC-Ssc-115755 Sus scrofa 96.99 4.00e-158 550.00
IUUC-Tgu-117326 Taeniopygia guttata 81.33 8.00e-115 406.00
IUUC-Tru-117858 Takifugu rubripes 75.99 8.00e-121 426.00
IUUC-Tsy-119296 Tarsius syrichta 72.52 2.00e-97 348.00
IUUC-Tni-119822 Tetraodon nigroviridis 95.85 9.00e-140 489.00
IUUC-Tca-120935 Theobroma cacao 29.67 1.00e-06 48.50
IUUC-Tbe-127366 Tupaia belangeri 95.02 1.00e-151 528.00
IUUC-Ttr-128484 Tursiops truncatus 72.83 9.00e-109 386.00
IUUC-Vpa-130304 Vicugna pacos 72.83 5.00e-116 410.00
IUUC-Vvi-131560 Vitis vinifera 28.57 5.00e-06 46.60
IUUC-Xtr-132062 Xenopus tropicalis 97.66 2.00e-159 554.00
IUUC-Xma-134288 Xiphophorus maculatus 93.31 1.00e-172 598.00
IUUC-Yli-134374 Yarrowia lipolytica 21.24 9.00e-06 45.10
IUUC-Zma-135310 Zea mays 27.27 5.00e-04 39.70
Created Date 25-Jun-2017

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