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Tag Content
iUUCD ID IUUC-Csa-023816
Ensembl Protein ID ENSCSAP00000001783.1
UniProt Accession A0A0D9QZJ4; A0A0D9QZJ4_CHLSB
Genbank Protein ID ENSCSAP00000001783
Protein Name Uncharacterized protein
Genbank Nucleotide ID AQIB01042591
Gene Name LDB1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCSAG00000005474.1 ENSCSAT00000003507.1 ENSCSAP00000001783.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/U-box 62.39 2.00e-124 442.00 IUUC-Dme-031667
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Chlorocebus sabaeus
Protein Sequence
(Fasta)
MSVGCACPGC SSKSFKLYSP KEPPNGNAFP PFHPGTMLDR DVGPTPMYPP TYLEPGIGRH 60
TPYGNQTDYR IFELNKRLQN WTEECDNLWW DAFTTEFFED DAMLTITFCL EDGPKRYTIG 120
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Protein Fasta Sequence



>IUUC-Csa-023816|E3,U-box|Chlorocebus sabaeus
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Nucleotide Sequence
(Fasta)
GCACGTCGTC GCTTGCTGCG CGCTCTCCCG GGTCACTTTG ACACGGCTCT CCCCTCCCAC 60
TAGCAGGACA ATTAGCATAT TAATAAAGCC CGGCCCTGCC CGGCTTGGGC TGGGGAGCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Csa-023816|E3,U-box|Chlorocebus sabaeus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0000790--C:nuclear chromatin
GO:0005667--C:transcription factor complex
GO:0003682--F:chromatin binding
GO:0001158--F:enhancer sequence-specific DNA binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0009948--P:anterior/posterior axis specification
GO:0022607--P:cellular component assembly
GO:0021702--P:cerebellar Purkinje cell differentiation
GO:0010669--P:epithelial structure maintenance
GO:0001702--P:gastrulation with mouth forming second
GO:0001942--P:hair follicle development
GO:0043973--P:histone H3-K4 acetylation
GO:0045647--P:negative regulation of erythrocyte differentiation
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045785--P:positive regulation of cell adhesion
GO:0046985--P:positive regulation of hemoglobin biosynthetic process
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0032784--P:regulation of DNA-templated transcription, elongation
GO:0051893--P:regulation of focal adhesion assembly
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance
GO:0006366--P:transcription from RNA polymerase II promoter
GO:0000972--P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016055--P:Wnt signaling pathway

KEGG csab:103216423
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000177 Aegilops tauschii 25.90 2.00e-04 42.00
IUUC-Aml-002031 Ailuropoda melanoleuca 98.79 0.00e+00 763.00
IUUC-Atr-003083 Amborella trichopoda 23.53 3.00e-04 41.20
IUUC-Apl-004210 Anas platyrhynchos 96.96 1.00e-176 611.00
IUUC-Aca-005241 Anolis carolinensis 98.78 0.00e+00 769.00
IUUC-Aly-006204 Arabidopsis lyrata 23.94 1.00e-06 48.50
IUUC-Ath-007339 Arabidopsis thaliana 23.94 1.00e-06 48.50
IUUC-Acl-008255 Aspergillus clavatus 20.63 2.00e-06 48.10
IUUC-Ame-010910 Astyanax mexicanus 94.42 0.00e+00 734.00
IUUC-Bgr-012180 Blumeria graminis 21.21 5.00e-05 43.10
IUUC-Bta-012596 Bos taurus 73.67 2.00e-153 534.00
IUUC-Bci-013927 Botrytis cinerea 26.03 2.00e-06 48.10
IUUC-Bol-015721 Brassica oleracea 24.48 3.00e-07 50.40
IUUC-Bra-017183 Brassica rapa 24.48 3.00e-07 50.40
IUUC-Cel-018189 Caenorhabditis elegans 33.19 4.00e-29 122.00
IUUC-Cja-019586 Callithrix jacchus 75.71 1.00e-158 552.00
IUUC-Cfa-021188 Canis familiaris 98.79 0.00e+00 761.00
IUUC-Cpo-022350 Cavia porcellus 99.75 0.00e+00 753.00
IUUC-Cho-024958 Choloepus hoffmanni 60.21 4.00e-63 234.00
IUUC-Cin-025721 Ciona intestinalis 50.80 3.00e-87 315.00
IUUC-Csv-026065 Ciona savignyi 53.67 1.00e-91 329.00
IUUC-Dre-027356 Danio rerio 69.79 5.00e-150 524.00
IUUC-Dno-029918 Dasypus novemcinctus 99.22 0.00e+00 743.00
IUUC-Dor-030634 Dipodomys ordii 99.73 0.00e+00 699.00
IUUC-Dse-031245 Dothistroma septosporum 24.67 9.00e-05 42.40
IUUC-Dme-031667 Drosophila melanogaster 62.21 2.00e-122 432.00
IUUC-Ete-032246 Echinops telfairi 73.11 1.00e-153 535.00
IUUC-Eca-034015 Equus caballus 75.14 8.00e-159 552.00
IUUC-Eeu-034902 Erinaceus europaeus 99.73 0.00e+00 699.00
IUUC-Fca-035903 Felis catus 99.26 0.00e+00 753.00
IUUC-Fal-037407 Ficedula albicollis 77.03 5.00e-152 530.00
IUUC-Gmo-039466 Gadus morhua 91.27 0.00e+00 744.00
IUUC-Ggr-040030 Gaeumannomyces graminis 25.93 5.00e-03 37.00
IUUC-Gga-040214 Gallus gallus 98.30 0.00e+00 759.00
IUUC-Gac-042214 Gasterosteus aculeatus 90.89 0.00e+00 746.00
IUUC-Gma-042794 Glycine max 23.90 3.00e-06 47.80
IUUC-Ggo-044988 Gorilla gorilla 74.86 2.00e-159 554.00
IUUC-Hsa-046092 Homo sapiens 74.58 6.00e-156 543.00
IUUC-Itr-047934 Ictidomys tridecemlineatus 99.76 0.00e+00 776.00
IUUC-Lch-049895 Latimeria chalumnae 82.26 3.00e-100 357.00
IUUC-Lpe-050806 Leersia perrieri 25.34 5.00e-06 47.00
IUUC-Loc-052845 Lepisosteus oculatus 96.11 0.00e+00 762.00
IUUC-Lma-053090 Leptosphaeria maculans 23.62 1.00e-04 42.00
IUUC-Laf-054538 Loxodonta africana 96.73 0.00e+00 647.00
IUUC-Mcc-055116 Macaca mulatta 70.10 6.00e-118 416.00
IUUC-Meu-056777 Macropus eugenii 94.13 0.00e+00 643.00
IUUC-Mpo-057376 Magnaporthe poae 21.47 2.00e-03 37.70
IUUC-Mtr-058142 Medicago truncatula 23.90 3.00e-06 47.80
IUUC-Mga-059716 Meleagris gallopavo 76.47 5.00e-151 526.00
IUUC-Mmr-060649 Microcebus murinus 74.58 8.00e-158 549.00
IUUC-Mdo-062535 Monodelphis domestica 75.14 7.00e-156 543.00
IUUC-Mmu-064036 Mus musculus 74.02 2.00e-156 545.00
IUUC-Mac-065338 Musa acuminata 23.70 2.00e-05 44.70
IUUC-Mpu-065719 Mustela putorius furo 99.76 0.00e+00 776.00
IUUC-Mlu-067219 Myotis lucifugus 98.03 0.00e+00 741.00
IUUC-Ncr-068691 Neurospora crassa 22.36 7.00e-05 42.70
IUUC-Nle-068983 Nomascus leucogenys 75.71 5.00e-159 553.00
IUUC-Opr-070467 Ochotona princeps 99.73 0.00e+00 699.00
IUUC-Ont-071566 Oreochromis niloticus 93.10 0.00e+00 755.00
IUUC-Oan-073368 Ornithorhynchus anatinus 98.67 0.00e+00 684.00
IUUC-Ocu-074854 Oryctolagus cuniculus 74.86 6.00e-160 556.00
IUUC-Ome-081687 Oryza meridionalis 24.64 2.00e-03 37.70
IUUC-Ola-086364 Oryzias latipes 93.12 0.00e+00 752.00
IUUC-Oga-088235 Otolemur garnettii 73.74 8.00e-155 539.00
IUUC-Oar-089547 Ovis aries 98.79 0.00e+00 762.00
IUUC-Ptr-091423 Pan troglodytes 75.14 8.00e-159 552.00
IUUC-Pan-092378 Papio anubis 100.00 0.00e+00 701.00
IUUC-Psi-093638 Pelodiscus sinensis 75.14 4.00e-153 533.00
IUUC-Pma-094384 Petromyzon marinus 64.61 3.00e-50 190.00
IUUC-Pno-095027 Phaeosphaeria nodorum 22.66 2.00e-04 40.80
IUUC-Pfo-096031 Poecilia formosa 90.93 0.00e+00 695.00
IUUC-Pab-097886 Pongo abelii 75.71 5.00e-159 553.00
IUUC-Pop-099430 Populus trichocarpa 25.43 7.00e-06 46.20
IUUC-Pca-101138 Procavia capensis 99.73 0.00e+00 699.00
IUUC-Ppe-101293 Prunus persica 28.57 6.00e-06 46.20
IUUC-Pva-103215 Pteropus vampyrus 75.14 1.00e-159 555.00
IUUC-Pte-104238 Pyrenophora teres 24.41 3.00e-04 40.00
IUUC-Rno-105968 Rattus norvegicus 74.30 1.00e-156 545.00
IUUC-Sha-107595 Sarcophilus harrisii 98.99 0.00e+00 732.00
IUUC-Ssl-108527 Sclerotinia sclerotiorum 26.14 4.00e-06 46.60
IUUC-Smo-109552 Selaginella moellendorffii 19.67 1.00e-04 42.40
IUUC-Sly-110873 Solanum lycopersicum 26.06 1.00e-05 45.80
IUUC-Stu-112586 Solanum tuberosum 20.00 9.00e-03 35.80
IUUC-Sar-113076 Sorex araneus 72.53 8.00e-102 363.00
IUUC-Sre-115143 Sporisorium reilianum 18.84 1.10e-02 35.40
IUUC-Ssc-115755 Sus scrofa 99.20 0.00e+00 690.00
IUUC-Tgu-117326 Taeniopygia guttata 76.75 2.00e-151 528.00
IUUC-Tru-117858 Takifugu rubripes 72.39 2.00e-156 544.00
IUUC-Tsy-119296 Tarsius syrichta 68.44 3.00e-139 488.00
IUUC-Tni-119822 Tetraodon nigroviridis 89.83 0.00e+00 632.00
IUUC-Tca-120935 Theobroma cacao 28.57 4.00e-06 47.00
IUUC-Tbe-127366 Tupaia belangeri 98.13 0.00e+00 674.00
IUUC-Ttr-128484 Tursiops truncatus 75.08 9.00e-148 516.00
IUUC-Vpa-130304 Vicugna pacos 72.34 5.00e-118 417.00
IUUC-Vvi-131560 Vitis vinifera 28.42 1.00e-05 45.80
IUUC-Xtr-132062 Xenopus tropicalis 97.60 0.00e+00 679.00
IUUC-Xma-134288 Xiphophorus maculatus 93.69 0.00e+00 767.00
IUUC-Yli-134374 Yarrowia lipolytica 20.53 4.00e-06 46.60
IUUC-Zma-135310 Zea mays 22.10 4.00e-04 40.40
Created Date 25-Jun-2017

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