iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121539

Ensembl Protein ID

EOY09682

UniProt Accession

A0A061EZ86; A0A061EZ86_THECC

Genbank Protein ID

EOY09682.1

Protein Name

IBR domain-containing protein isoform 1

Genbank Nucleotide ID

CM001883

Gene Name

TCM_025075

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_025075	EOY09682	EOY09682
TCM_025075	EOY09683	EOY09683

Status

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	7.90e-45	153.8	144	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv.teiscpaaecpekleeseikellveeelykryekllleevveadaalk 89
           C +C+ +++ ++l  +++C h fC++C+  y+++ i++g     + cp+++c + + ++ i+  l+++e +++y ++ ++++ve ++++k
   Q: 144  CGICFETYPYDRLH-TAACGHPFCNSCWAGYISTSINDGPGcLMLRCPDPSCAAAVGQDMINV-LASDEDKEKYFRYFIRSYVEDNRKTK 231
           99********9888.669*********************8758899***************99.799999******************** PP
   S: 90   wcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCnh 179
           wcpap+C+++v +   + +  v+c +c+  fC++C ee+H++++C +++++  k++    e+e+++++ ansk+CpkCk +iekn+gC+h
   Q: 232  WCPAPGCDYAVDFILGSGSYDVTC-RCSYSFCWNCTEEAHRPVDCGTVAKWILKNS---AESENMNWILANSKPCPKCKRPIEKNQGCMH 317
           ***********99998899*****.9***************************999...89***************************** PP
   S: 180  mtC.akCkaefCwlC 193
           +tC   Ck efCwlC
   Q: 318  ITCtPPCKFEFCWLC 332
           ***778********* PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MESEDDIDMH DANNESGEDD FYSGGDDDAG AMAAYDDSDA DVADYEFIDN DSDDSDDLVS 60
HRYQQNYTVL SEVDICQRQE DDIMRVSTVL SISKVEAGIL LRYYNWSVSK VHDEWFADEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTTAAAGT TTATTAATTA ATTACTTAAT TACGTTTGCC CTTTTCTCCT CCTTTTTTGT 60
TTTTTCTTCC TTCCTCTCTG GCAAAAGCCA CAAAGAATTA ACCATTAACT TATTAAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR
SM00547--ZnF_RBZ

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000693	Aegilops tauschii	69.26	0.00e+00	736.00
IUUC-Atr-002495	Amborella trichopoda	78.63	0.00e+00	911.00
IUUC-Apl-003749	Anas platyrhynchos	29.79	1.00e-56	214.00
IUUC-Aca-004337	Anolis carolinensis	28.70	4.00e-56	212.00
IUUC-Aly-005668	Arabidopsis lyrata	77.55	0.00e+00	868.00
IUUC-Ath-006834	Arabidopsis thaliana	74.66	0.00e+00	871.00
IUUC-Ago-007926	Ashbya gossypii	27.38	1.00e-44	173.00
IUUC-Acl-008252	Aspergillus clavatus	34.74	4.00e-67	248.00
IUUC-Afl-008468	Aspergillus flavus	34.17	3.00e-64	238.00
IUUC-Afu-009062	Aspergillus fumigatus	34.40	2.00e-67	249.00
IUUC-Ani-009219	Aspergillus nidulans	35.27	1.00e-66	246.00
IUUC-Ang-009538	Aspergillus niger	34.63	1.00e-62	233.00
IUUC-Aor-010009	Aspergillus oryzae	34.17	4.00e-64	238.00
IUUC-Ate-010497	Aspergillus terreus	34.87	5.00e-62	231.00
IUUC-Bgr-012016	Blumeria graminis	30.83	1.00e-63	236.00
IUUC-Bci-013819	Botrytis cinerea	33.02	2.00e-66	246.00
IUUC-Bdi-014714	Brachypodium distachyon	76.85	0.00e+00	835.00
IUUC-Bol-015311	Brassica oleracea	75.61	0.00e+00	825.00
IUUC-Bra-018031	Brassica rapa	75.05	0.00e+00	824.00
IUUC-Cre-022815	Chlamydomonas reinhardtii	50.21	1.00e-137	482.00
IUUC-Cgl-026434	Colletotrichum gloeosporioides	32.79	6.00e-65	241.00
IUUC-Cne-026861	Cryptococcus neoformans	30.43	2.00e-56	213.00
IUUC-Dse-031171	Dothistroma septosporum	33.95	2.00e-68	252.00
IUUC-Eeu-035166	Erinaceus europaeus	27.37	7.00e-29	123.00
IUUC-Fca-036063	Felis catus	27.49	3.00e-54	206.00
IUUC-Fox-037790	Fusarium oxysporum	39.74	2.00e-43	168.00
IUUC-Fso-038125	Fusarium solani	34.98	5.00e-70	257.00
IUUC-Ggr-039722	Gaeumannomyces graminis	32.34	6.00e-64	237.00
IUUC-Gga-040616	Gallus gallus	30.00	6.00e-56	212.00
IUUC-Gma-042954	Glycine max	75.71	0.00e+00	910.00
IUUC-Hvu-047322	Hordeum vulgare	75.83	0.00e+00	830.00
IUUC-Kpa-049350	Komagataella pastoris	30.67	6.00e-50	191.00
IUUC-Lpe-051080	Leersia perrieri	77.26	0.00e+00	847.00
IUUC-Loc-052381	Lepisosteus oculatus	30.15	2.00e-58	220.00
IUUC-Lma-053253	Leptosphaeria maculans	33.96	2.00e-71	262.00
IUUC-Laf-053411	Loxodonta africana	27.73	2.00e-54	207.00
IUUC-Mor-057179	Magnaporthe oryzae	32.78	4.00e-64	238.00
IUUC-Mpo-057553	Magnaporthe poae	33.02	3.00e-64	238.00
IUUC-Mtr-058263	Medicago truncatula	72.91	0.00e+00	862.00
IUUC-Mga-059352	Meleagris gallopavo	29.88	8.00e-56	211.00
IUUC-Mmr-061763	Microcebus murinus	27.91	2.00e-54	206.00
IUUC-Mac-065497	Musa acuminata	72.62	0.00e+00	856.00
IUUC-Nfi-068339	Neosartorya fischeri	34.40	2.00e-67	249.00
IUUC-Ncr-068947	Neurospora crassa	32.24	6.00e-59	221.00
IUUC-Ont-072092	Oreochromis niloticus	29.98	1.00e-57	218.00
IUUC-Oba-075918	Oryza barthii	62.34	0.00e+00	669.00
IUUC-Obr-076649	Oryza brachyantha	77.27	0.00e+00	736.00
IUUC-Ogl-077640	Oryza glaberrima	77.63	0.00e+00	852.00
IUUC-Ogu-078785	Oryza glumaepatula	75.42	0.00e+00	817.00
IUUC-Oin-079448	Oryza indica	77.63	0.00e+00	853.00
IUUC-Olo-080626	Oryza longistaminata	73.94	0.00e+00	720.00
IUUC-Ome-081470	Oryza meridionalis	78.00	0.00e+00	856.00
IUUC-Oni-082202	Oryza nivara	75.60	0.00e+00	821.00
IUUC-Opu-084143	Oryza punctata	76.71	0.00e+00	821.00
IUUC-Oru-084778	Oryza rufipogon	75.60	0.00e+00	821.00
IUUC-Osa-086044	Oryza sativa	77.33	0.00e+00	742.00
IUUC-Ola-086873	Oryzias latipes	29.73	2.00e-57	216.00
IUUC-Olu-087826	Ostreococcus lucimarinus	35.27	2.00e-77	282.00
IUUC-Pan-092334	Papio anubis	28.10	4.00e-56	212.00
IUUC-Pma-094243	Petromyzon marinus	28.90	2.00e-52	199.00
IUUC-Pno-095124	Phaeosphaeria nodorum	28.81	4.00e-47	181.00
IUUC-Ppa-095545	Physcomitrella patens	70.45	0.00e+00	769.00
IUUC-Pfo-097370	Poecilia formosa	29.56	6.00e-58	218.00
IUUC-Pop-099195	Populus trichocarpa	88.76	0.00e+00	986.00
IUUC-Ppe-101468	Prunus persica	90.05	0.00e+00	990.00
IUUC-Pgr-103443	Puccinia graminis	30.26	6.00e-59	221.00
IUUC-Pte-104022	Pyrenophora teres	30.36	1.00e-63	236.00
IUUC-Pyt-104643	Pyrenophora triticirepentis	31.66	4.00e-71	261.00
IUUC-Sce-106154	Saccharomyces cerevisiae	27.79	1.00e-43	169.00
IUUC-Sha-107341	Sarcophilus harrisii	29.46	7.00e-56	211.00
IUUC-Sja-107977	Schizosaccharomyces japonicus	28.78	9.00e-58	216.00
IUUC-Spo-108222	Schizosaccharomyces pombe	33.64	2.00e-65	242.00
IUUC-Smo-109424	Selaginella moellendorffii	68.63	0.00e+00	762.00
IUUC-Sit-110645	Setaria italica	78.37	0.00e+00	863.00
IUUC-Sly-111226	Solanum lycopersicum	77.09	0.00e+00	924.00
IUUC-Stu-112533	Solanum tuberosum	80.76	0.00e+00	832.00
IUUC-Sbi-114839	Sorghum bicolor	75.08	0.00e+00	855.00
IUUC-Ssc-115681	Sus scrofa	27.81	1.00e-55	211.00
IUUC-Tgu-116830	Taeniopygia guttata	30.21	1.00e-55	211.00
IUUC-Tru-117711	Takifugu rubripes	30.17	1.00e-60	227.00
IUUC-Tre-121902	Trichoderma reesei	33.57	6.00e-68	251.00
IUUC-Tvi-122474	Trichoderma virens	33.72	4.00e-68	251.00
IUUC-Tae-123155	Triticum aestivum	77.28	0.00e+00	847.00
IUUC-Tur-126546	Triticum urartu	69.70	0.00e+00	741.00
IUUC-Tme-127089	Tuber melanosporum	33.26	4.00e-62	231.00
IUUC-Tbe-127647	Tupaia belangeri	29.56	6.00e-39	155.00
IUUC-Vpa-130603	Vicugna pacos	27.73	2.00e-53	203.00
IUUC-Vvi-131543	Vitis vinifera	85.74	0.00e+00	1001.00
IUUC-Xma-133029	Xiphophorus maculatus	29.56	4.00e-58	219.00
IUUC-Zma-134901	Zea mays	75.25	0.00e+00	867.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence