iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028582

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

PDZ domain-containing RING finger 3a

Genbank Nucleotide ID

CR354544

Gene Name

pdzrn3a; si:dkey-31e3.5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000073757.4	ENSDART00000112965.3	ENSDARP00000100414.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.60e-07	30.0	14	74
E3 activity/RING/RING	1.00e-05	26.8	18	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrli 65
           ++++C + +++ +dP  +p+G+++ +++  +wl++ ++ cPv  q++++++l   l l++li
   Q: 14   PDLICKLCGKVLEDPLATPCGHVFCAACALQWLSKVNS-CPVQCQKISNKELNQVLPLKNLI 74
           6899*********************************9.*********************99 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPl 44
           C +C   ++d pl +pCgHvf+a C  +w       sk  +CP+
   Q: 18   CKLCGKVLED-PLATPCGHVFCAACALQW------LSKVNSCPV 54
           99********.******************......********6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MGFDLDRFEG PVDPDLICKL CGKVLEDPLA TPCGHVFCAA CALQWLSKVN SCPVQCQKIS 60
NKELNQVLPL KNLILKLDIK CDHRERGCAR VMKLQHLAEH AEMCDFSPVR CRNEGCDAVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGCGCAC GAACTGCTCT GCTTGTTGAG TGTTTACGGT AGACGCGCCT CTTCTCCTGA 60
CTCAAACTAG TAGTTTATCA CTCATCTCAT CAGCGTGGGC AGACATCTCT CTCTCTCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR013010--Znf_SIAH
IPR001293--Znf_TRAF

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS51081--ZF_SIAH
PS50145--ZF_TRAF

Pfam

PF00595--PDZ
PF02176--zf-TRAF

SMART

SM00228--PDZ
SM00184--RING
SM00504--Ubox

Gene Ontology

GO:0031594--C:neuromuscular junction
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007528--P:neuromuscular junction development

KEGG

dre:100149029

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dse-031172	Dothistroma septosporum	51.22	3.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence