iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062781

UUCD1 version

UUC-MoD-00199

Ensembl Protein ID

ENSMODP00000026584.3

UniProt Accession

F6T2X0; F6T2X0_MONDO

Protein Name

Uncharacterized protein

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000021268.3	ENSMODT00000027060.3	ENSMODP00000026584.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-09	36.8	251	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 251  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 293
           ********66666******************.....899********7 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MSLQQPCEVV KMLLSIGMLM LSATQIYTIL TVQLFAFFNL LPVEADILAY NFENVSQTFD 60
DLPARFGYRL PAEGLKGFLI NSKPENACEP IAPPPLKDNS SSAFIVLIRR LDCNFDIKVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATACCTGT GTCTGAGGCA ACAGGACCCT CTGTAGTCAG AGGTTATGGG ACCTTTGCAT 60
GTCTTTGCAA CAACCCTGTG AAGTAAGTAG ATCATATATT ATTATCCTTA TTTTATTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	92.15	7.00e-180	622.00
IUUC-Atr-003055	Amborella trichopoda	33.22	9.00e-34	137.00
IUUC-Apl-004022	Anas platyrhynchos	89.53	8.00e-174	602.00
IUUC-Aca-004641	Anolis carolinensis	87.50	2.00e-168	584.00
IUUC-Aly-006519	Arabidopsis lyrata	32.05	1.00e-32	133.00
IUUC-Acl-008256	Aspergillus clavatus	58.33	8.00e-14	71.20
IUUC-Ang-009734	Aspergillus niger	60.00	9.00e-14	71.60
IUUC-Ame-010635	Astyanax mexicanus	73.78	2.00e-136	479.00
IUUC-Bta-012593	Bos taurus	91.88	0.00e+00	644.00
IUUC-Bci-013936	Botrytis cinerea	35.14	8.00e-13	68.60
IUUC-Bra-017689	Brassica rapa	33.45	1.00e-34	140.00
IUUC-Cel-018181	Caenorhabditis elegans	31.72	2.00e-28	120.00
IUUC-Cja-019353	Callithrix jacchus	91.62	1.00e-178	619.00
IUUC-Cfa-020234	Canis familiaris	92.41	5.00e-180	623.00
IUUC-Cpo-021602	Cavia porcellus	90.12	3.00e-153	534.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	60.80
IUUC-Csa-023201	Chlorocebus sabaeus	92.15	5.00e-180	623.00
IUUC-Cho-024954	Choloepus hoffmanni	78.27	8.00e-145	506.00
IUUC-Cin-025554	Ciona intestinalis	42.32	1.00e-60	226.00
IUUC-Dre-028744	Danio rerio	79.08	3.00e-138	484.00
IUUC-Dno-029675	Dasypus novemcinctus	92.43	6.00e-180	623.00
IUUC-Dor-030791	Dipodomys ordii	76.96	5.00e-134	470.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	40.07	1.00e-50	194.00
IUUC-Ete-032577	Echinops telfairi	83.96	2.00e-136	478.00
IUUC-Eca-034148	Equus caballus	90.84	1.00e-177	615.00
IUUC-Eeu-034552	Erinaceus europaeus	90.58	1.00e-172	598.00
IUUC-Fca-036021	Felis catus	92.15	2.00e-179	621.00
IUUC-Fal-037621	Ficedula albicollis	89.27	2.00e-170	591.00
IUUC-Fox-038011	Fusarium oxysporum	35.79	2.00e-13	70.90
IUUC-Gmo-039485	Gadus morhua	78.50	5.00e-133	467.00
IUUC-Gga-041166	Gallus gallus	90.05	5.00e-175	607.00
IUUC-Gac-042124	Gasterosteus aculeatus	77.50	5.00e-130	457.00
IUUC-Ggo-045344	Gorilla gorilla	91.88	1.00e-179	622.00
IUUC-Hsa-045960	Homo sapiens	91.88	1.00e-179	622.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	91.88	5.00e-180	623.00
IUUC-Lch-050635	Latimeria chalumnae	81.88	1.00e-133	469.00
IUUC-Lpe-051192	Leersia perrieri	35.57	2.00e-30	127.00
IUUC-Loc-052869	Lepisosteus oculatus	79.20	8.00e-140	489.00
IUUC-Lma-053199	Leptosphaeria maculans	56.25	9.00e-14	71.20
IUUC-Laf-054477	Loxodonta africana	90.84	8.00e-178	615.00
IUUC-Mcc-055232	Macaca mulatta	92.15	5.00e-180	623.00
IUUC-Meu-056237	Macropus eugenii	86.76	6.00e-122	429.00
IUUC-Mor-057236	Magnaporthe oryzae	57.78	4.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	33.46	7.00e-30	124.00
IUUC-Mla-059171	Melampsora laricipopulina	38.57	3.00e-10	60.10
IUUC-Mga-059780	Meleagris gallopavo	90.31	4.00e-175	607.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	4.00e-12	66.60
IUUC-Mmr-061384	Microcebus murinus	93.53	9.00e-176	609.00
IUUC-Mmu-063727	Mus musculus	89.01	6.00e-167	579.00
IUUC-Mpu-066497	Mustela putorius furo	92.15	5.00e-180	623.00
IUUC-Mlu-067654	Myotis lucifugus	93.99	1.00e-113	401.00
IUUC-Nle-069368	Nomascus leucogenys	91.88	1.00e-179	622.00
IUUC-Opr-070934	Ochotona princeps	66.75	7.00e-109	387.00
IUUC-Ont-071868	Oreochromis niloticus	76.18	2.00e-127	448.00
IUUC-Oan-072733	Ornithorhynchus anatinus	89.68	2.00e-106	378.00
IUUC-Ocu-074083	Oryctolagus cuniculus	92.15	2.00e-179	621.00
IUUC-Obr-076703	Oryza brachyantha	35.82	2.00e-31	130.00
IUUC-Ogl-077861	Oryza glaberrima	36.36	2.00e-31	130.00
IUUC-Ogu-078205	Oryza glumaepatula	35.57	1.00e-29	124.00
IUUC-Olo-081024	Oryza longistaminata	35.97	2.00e-30	128.00
IUUC-Ome-081844	Oryza meridionalis	36.36	4.00e-31	129.00
IUUC-Oru-085122	Oryza rufipogon	33.44	4.00e-29	122.00
IUUC-Osa-086175	Oryza sativa	36.36	2.00e-31	130.00
IUUC-Ola-086440	Oryzias latipes	74.01	7.00e-115	407.00
IUUC-Oga-088291	Otolemur garnettii	88.44	5.00e-164	570.00
IUUC-Oar-089911	Ovis aries	91.62	0.00e+00	642.00
IUUC-Ptr-091166	Pan troglodytes	91.88	1.00e-179	622.00
IUUC-Pan-092154	Papio anubis	92.15	5.00e-180	623.00
IUUC-Psi-093062	Pelodiscus sinensis	89.53	6.00e-170	590.00
IUUC-Pma-094545	Petromyzon marinus	73.21	9.00e-26	107.00
IUUC-Pno-094907	Phaeosphaeria nodorum	60.00	8.00e-14	71.60
IUUC-Ppa-095928	Physcomitrella patens	34.85	2.00e-31	129.00
IUUC-Pfo-097232	Poecilia formosa	76.80	4.00e-131	461.00
IUUC-Pab-097909	Pongo abelii	91.62	5.00e-180	623.00
IUUC-Pop-098937	Populus trichocarpa	30.00	8.00e-28	118.00
IUUC-Pca-100724	Procavia capensis	77.03	7.00e-136	476.00
IUUC-Ppe-101970	Prunus persica	34.45	1.00e-27	117.00
IUUC-Pva-102624	Pteropus vampyrus	86.91	2.00e-159	554.00
IUUC-Pgr-103420	Puccinia graminis	46.88	3.00e-12	67.80
IUUC-Ptt-103943	Puccinia triticina	44.44	1.00e-10	61.20
IUUC-Pte-104044	Pyrenophora teres	47.27	2.00e-13	70.50
IUUC-Pyt-104748	Pyrenophora triticirepentis	60.00	1.00e-13	70.90
IUUC-Rno-105109	Rattus norvegicus	88.48	1.00e-159	555.00
IUUC-Sha-107563	Sarcophilus harrisii	98.43	0.00e+00	636.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.32	4.00e-14	72.40
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	7.00e-13	68.60
IUUC-Sit-110628	Setaria italica	34.13	6.00e-32	132.00
IUUC-Ssc-116043	Sus scrofa	92.15	1.00e-178	619.00
IUUC-Tgu-116908	Taeniopygia guttata	88.25	7.00e-171	593.00
IUUC-Tru-118219	Takifugu rubripes	76.42	3.00e-131	461.00
IUUC-Tsy-119333	Tarsius syrichta	92.93	5.00e-179	620.00
IUUC-Tni-120332	Tetraodon nigroviridis	72.13	4.00e-86	310.00
IUUC-Tae-125320	Triticum aestivum	31.27	4.00e-29	121.00
IUUC-Tbe-127859	Tupaia belangeri	81.36	1.00e-158	552.00
IUUC-Ttr-129219	Tursiops truncatus	83.77	3.00e-153	534.00
IUUC-Vda-129899	Verticillium dahliae	43.40	7.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	89.01	1.00e-167	582.00
IUUC-Vvi-131355	Vitis vinifera	34.87	1.00e-30	127.00
IUUC-Xtr-132114	Xenopus tropicalis	77.78	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence